RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GPATCH11Q8N954 259 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 IVLP07476 585 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 CHMLP26374 656 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 SNW1Q13573 536 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 HDAC5Q9UQL6 1122 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 DNM1Q05193 864 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 RAD50Q92878 1312 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 RTEL1-TNFRSF6BF6WH68 1400 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 NSD3Q9BZ95 1437 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 PNMA6AP0CW24 399 aaPredicted RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 CYP2C19P33261 490 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 NAA30Q147X3 362 aaPredicted RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 TEX2Q8IWB9 1127 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 LRRCC1Q9C099 1032 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 SCAF11Q99590 1463 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 CCDC69A6NI79 296 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 TOMM22Q9NS69 142 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 NRBP1Q9UHY1 535 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 CASTP20810 708 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 CASQ1P31415 396 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 CCT4P50991 539 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 CLSTN2Q9H4D0 955 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 THOC2Q8NI27 1593 aaKnown RBP5.91□□□□□ -1.46
HERC1-201ENST00000443617 HMOX1P09601 288 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 KDM6BO15054 1643 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 ZSCAN26Q16670 478 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 ARFGAP3Q9NP61 516 aa5.91□□□□□ -1.46
HERC1-201ENST00000443617 BCORL1Q5H9F3 1711 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 TMX1Q9H3N1 280 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.9□□□□□ -1.467e-7■■□□□ 13.8
HERC1-201ENST00000443617 NEK11Q8NG66 645 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 LRRFIP1Q32MZ4 808 aaKnown RBP5.9□□□□□ -1.46
HERC1-201ENST00000443617 TSPYL6Q8N831 410 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 LARP6Q9BRS8 491 aaKnown RBP5.9□□□□□ -1.46
HERC1-201ENST00000443617 FAM107BQ9H098 131 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 JAKMIP1Q96N16 626 aaKnown RBP5.9□□□□□ -1.46
HERC1-201ENST00000443617 STK31Q9BXU1 1019 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 CTAGE5O15320 804 aa5.9□□□□□ -1.46
HERC1-201ENST00000443617 USP16Q9Y5T5 823 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 CAPN2P17655 700 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 ICE2Q659A1 982 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 CACTINQ8WUQ7 758 aaKnown RBP5.9□□□□□ -1.47
HERC1-201ENST00000443617 ST7Q9NRC1 585 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 TFIP11Q9UBB9 837 aaKnown RBP5.9□□□□□ -1.47
HERC1-201ENST00000443617 PPP6R1Q9UPN7 881 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 PDS5BQ9NTI5 1447 aa5.9□□□□□ -1.47
HERC1-201ENST00000443617 SYT10Q6XYQ8 523 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 RUFY3Q7L099 469 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 PLEKHF1Q96S99 279 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 ABCC2Q92887 1545 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 CALRP27797 417 aaKnown RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 TMEM132EQ6IEE7 984 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 CEP85Q6P2H3 762 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 CCDC91Q7Z6B0 441 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 FERMT3Q86UX7 667 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 C10orf67Q8IYJ2 551 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 ANO10Q9NW15 660 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 DACT1Q9NYF0 836 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 MRVI1Q9Y6F6 885 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 SLC4A2P04920 1241 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 ERCC6LQ2NKX8 1250 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 TULP2O00295 520 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 GOLGA5Q8TBA6 731 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 ZNF396Q96N95 335 aaPredicted RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 WDR7Q9Y4E6 1490 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 CDC25BP30305 580 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 GEMIN8Q9NWZ8 242 aaKnown RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 CCDC150Q8NCX0 1101 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 DRC1Q96MC2 740 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 DNAJC25Q9H1X3 360 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 PRPF40BQ6NWY9 871 aaKnown RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 ELP1O95163 1332 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 GJB2P29033 226 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 PPIP5K1Q6PFW1 1433 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 CCDC83Q8IWF9 413 aa5.89□□□□□ -1.47
HERC1-201ENST00000443617 SECISBP2LQ93073 1101 aaKnown RBP5.89□□□□□ -1.47
HERC1-201ENST00000443617 GNAI3P08754 354 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 ZBTB9Q96C00 473 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 KDM5CP41229 1560 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 ARHGEF11O15085 1522 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 CCDC34Q96HJ3 373 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 ACBD3Q9H3P7 528 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 CNTROBQ8N137 903 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 CEBPZQ03701 1054 aaKnown RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 ARHGAP31Q2M1Z3 1444 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 HECW1Q76N89 1606 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 HSP90B1P14625 803 aaKnown RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 SF3A1Q15459 793 aaKnown RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 PDILTQ8N807 584 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 C8orf58Q8NAV2 365 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 POTEB2H3BUK9 544 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 JRKLQ9Y4A0 524 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 CFAP45Q9UL16 551 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 TDRD7Q8NHU6 1098 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 877.7 ms