RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 LAMC1P11047 1609 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 PER1O15534 1290 aaPredicted RBP10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 MLECQ14165 292 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 TNRQ92752 1358 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 MYO5BQ9ULV0 1848 aa10.12□□□□□ -0.79
R3HDM1-210ENST00000443537 A6NJR5 290 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 ADH1BP00325 375 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 JUNDP17535 347 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 ABL2P42684 1182 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 ZNF516Q92618 1163 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 MYO3AQ8NEV4 1616 aa10.11□□□□□ -0.79
R3HDM1-210ENST00000443537 UBR1Q8IWV7 1749 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 SOCS7O14512 581 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 PPP1R15AO75807 674 aaPredicted RBP10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 LYPD8Q6UX82 237 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
R3HDM1-210ENST00000443537 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
R3HDM1-210ENST00000443537 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
R3HDM1-210ENST00000443537 FAM160A2Q8N612 972 aaPredicted RBP10.09□□□□□ -0.79
R3HDM1-210ENST00000443537 L3MBTL2Q969R5 705 aa10.09□□□□□ -0.79
R3HDM1-210ENST00000443537 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
R3HDM1-210ENST00000443537 NR6A1Q15406 480 aa10.08□□□□□ -0.8
R3HDM1-210ENST00000443537 PRDM9Q9NQV7 894 aa10.08□□□□□ -0.8
R3HDM1-210ENST00000443537 RALGAPBQ86X10 1494 aa10.08□□□□□ -0.8
R3HDM1-210ENST00000443537 NEXMIFQ5QGS0 1516 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 PTPRMP28827 1452 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 NRXN1Q9ULB1 1477 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 CTHP32929 405 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
R3HDM1-210ENST00000443537 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 TRAK2O60296 914 aa10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 IDI1Q13907 227 aa10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 PTPRNQ16849 979 aa10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
R3HDM1-210ENST00000443537 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
R3HDM1-210ENST00000443537 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
R3HDM1-210ENST00000443537 KCNC4Q03721 635 aa10.05□□□□□ -0.8
R3HDM1-210ENST00000443537 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
R3HDM1-210ENST00000443537 SLIT1O75093 1534 aa10.05□□□□□ -0.8
R3HDM1-210ENST00000443537 CCNYL3P0C7X3 344 aa10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 NUDT12Q9BQG2 462 aa10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
R3HDM1-210ENST00000443537 GPRASP1Q5JY77 1395 aa10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 PIK3C2GO75747 1445 aa10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 POLR1AO95602 1720 aaPredicted RBP10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 MMP16P51512 607 aa10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 ZNF326Q5BKZ1 582 aaKnown RBP10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
R3HDM1-210ENST00000443537 S1PR4O95977 384 aa10.02□□□□□ -0.81
R3HDM1-210ENST00000443537 RGL3Q3MIN7 710 aa10.02□□□□□ -0.81
R3HDM1-210ENST00000443537 ARHGAP23Q9P227 1491 aa10.02□□□□□ -0.81
R3HDM1-210ENST00000443537 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
R3HDM1-210ENST00000443537 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
R3HDM1-210ENST00000443537 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
R3HDM1-210ENST00000443537 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
R3HDM1-210ENST00000443537 IQGAP1P46940 1657 aa10□□□□□ -0.81
R3HDM1-210ENST00000443537 MMRN1Q13201 1228 aa10□□□□□ -0.81
R3HDM1-210ENST00000443537 FNBP4Q8N3X1 1017 aaPredicted RBP10□□□□□ -0.81
R3HDM1-210ENST00000443537 ROCK2O75116 1388 aaKnown RBP10□□□□□ -0.81
R3HDM1-210ENST00000443537 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
R3HDM1-210ENST00000443537 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
R3HDM1-210ENST00000443537 KCNH2Q12809 1159 aa9.99□□□□□ -0.81
R3HDM1-210ENST00000443537 EVA1BQ9NVM1 165 aa9.99□□□□□ -0.81
R3HDM1-210ENST00000443537 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
R3HDM1-210ENST00000443537 EID1Q9Y6B2 187 aa9.98□□□□□ -0.81
R3HDM1-210ENST00000443537 SETD1AO15047 1707 aaKnown RBP9.98□□□□□ -0.81
R3HDM1-210ENST00000443537 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
R3HDM1-210ENST00000443537 GGCXP38435 758 aa9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 CEBPAP49715 358 aaPredicted RBP9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 WASHC4Q2M389 1173 aa9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
R3HDM1-210ENST00000443537 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.81
R3HDM1-210ENST00000443537 IRF5Q13568 498 aa9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 NBPF8Q3BBV2 869 aa9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 C14orf93Q9H972 538 aaKnown RBP9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 FCF1Q9Y324 198 aaKnown RBP9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 NRXN3Q9Y4C0 1643 aa9.96□□□□□ -0.82
R3HDM1-210ENST00000443537 VAC14Q08AM6 782 aa9.95□□□□□ -0.82
R3HDM1-210ENST00000443537 ARID3AQ99856 593 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms