RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 SNW1Q13573 536 aaKnown RBP18.22■□□□□ 0.51
CDH23-207ENST00000442677 HOOK3Q86VS8 718 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
CDH23-207ENST00000442677 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
CDH23-207ENST00000442677 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDH23-207ENST00000442677 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
CDH23-207ENST00000442677 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
CDH23-207ENST00000442677 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
CDH23-207ENST00000442677 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.5
CDH23-207ENST00000442677 ISM2Q6H9L7 571 aa18.21■□□□□ 0.5
CDH23-207ENST00000442677 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
CDH23-207ENST00000442677 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
CDH23-207ENST00000442677 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 TMEM132EQ6IEE7 984 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
CDH23-207ENST00000442677 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 GAS2L2Q8NHY3 880 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 TSG101Q99816 390 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 GDPD2Q9HCC8 539 aa18.2■□□□□ 0.5
CDH23-207ENST00000442677 PPP1R12BO60237 982 aaPredicted RBP18.19■□□□□ 0.5
CDH23-207ENST00000442677 CCDC96Q2M329 555 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
CDH23-207ENST00000442677 WASF1Q92558 559 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 BIN1O00499 593 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 DYNC1I1O14576 645 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
CDH23-207ENST00000442677 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
CDH23-207ENST00000442677 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
CDH23-207ENST00000442677 FBF1Q8TES7 1133 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 DRC1Q96MC2 740 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 NLRP6P59044 892 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 HSF2BPO75031 334 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
CDH23-207ENST00000442677 HOMER2Q9NSB8 354 aa18.18■□□□□ 0.5
CDH23-207ENST00000442677 KRT32Q14532 448 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 TNPO1Q92973 898 aaKnown RBP18.17■□□□□ 0.5
CDH23-207ENST00000442677 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 HSPA4P34932 840 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 C6orf163Q5TEZ5 329 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 DAAM2Q86T65 1068 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 PAIP2Q9BPZ3 127 aaKnown RBP18.17■□□□□ 0.5
CDH23-207ENST00000442677 JPH4Q96JJ6 628 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 YEATS4O95619 227 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 CTNNA2P26232 953 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 CCDC6Q16204 474 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 VPS36Q86VN1 386 aa18.17■□□□□ 0.5
CDH23-207ENST00000442677 NAA15Q9BXJ9 866 aaKnown RBP18.17■□□□□ 0.5
CDH23-207ENST00000442677 IRX3P78415 501 aaPredicted RBP18.17■□□□□ 0.5
CDH23-207ENST00000442677 MICALL1Q8N3F8 863 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 TTC16Q8NEE8 873 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 TAOK3Q9H2K8 898 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 PRPF40BQ6NWY9 871 aaKnown RBP18.16■□□□□ 0.5
CDH23-207ENST00000442677 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
CDH23-207ENST00000442677 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
CDH23-207ENST00000442677 NOP2P46087 812 aaKnown RBP18.15■□□□□ 0.5
CDH23-207ENST00000442677 PPM1FP49593 454 aaPredicted RBP18.15■□□□□ 0.5
CDH23-207ENST00000442677 CNNM3Q8NE01 707 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 CCDC12Q8WUD4 166 aaPredicted RBP18.15■□□□□ 0.5
CDH23-207ENST00000442677 ALS2CR12Q96Q35 445 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 KRT222Q8N1A0 295 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 FSD2A1L4K1 749 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 CLGNO14967 610 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 CCDC82Q8N4S0 544 aa18.15■□□□□ 0.5
CDH23-207ENST00000442677 APBB1IPQ7Z5R6 666 aaPredicted RBP18.14■□□□□ 0.49
CDH23-207ENST00000442677 IDH1O75874 414 aaKnown RBP18.14■□□□□ 0.49
CDH23-207ENST00000442677 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
CDH23-207ENST00000442677 COMMD10Q9Y6G5 202 aa18.14■□□□□ 0.49
CDH23-207ENST00000442677 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
CDH23-207ENST00000442677 MXRA7P84157 204 aa18.14■□□□□ 0.49
CDH23-207ENST00000442677 CFAP57Q96MR6 1250 aa18.14■□□□□ 0.49
CDH23-207ENST00000442677 CCDC85AQ96PX6 553 aaPredicted RBP18.14■□□□□ 0.49
CDH23-207ENST00000442677 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 CEP57Q86XR8 500 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 PLEKHO1Q53GL0 409 aaPredicted RBP18.13■□□□□ 0.49
CDH23-207ENST00000442677 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
CDH23-207ENST00000442677 FSIP1Q8NA03 581 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 GNG11P61952 73 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 MCM6Q14566 821 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 GSDMDP57764 484 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
CDH23-207ENST00000442677 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
CDH23-207ENST00000442677 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
CDH23-207ENST00000442677 MTIF2P46199 727 aaKnown RBP18.12■□□□□ 0.49
CDH23-207ENST00000442677 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
CDH23-207ENST00000442677 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
CDH23-207ENST00000442677 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
CDH23-207ENST00000442677 SCAND2PQ9GZW5 306 aaPredicted RBP18.12■□□□□ 0.49
CDH23-207ENST00000442677 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms