RNA–Protein interactions for RNA: ENST00000442035.5

UBA1-206, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-206	ENST00000442035	PHF14	O94880	888 aa		28.49	■■■□□ 2.15
UBA1-206	ENST00000442035	ITPK1	Q13572	414 aa		28.48	■■■□□ 2.15
UBA1-206	ENST00000442035	AKAP4	Q5JQC9	854 aa		28.48	■■■□□ 2.15
UBA1-206	ENST00000442035	MSL1	Q68DK7	614 aa		28.48	■■■□□ 2.15
UBA1-206	ENST00000442035	KDM6A	O15550	1401 aa	Predicted RBP	28.47	■■■□□ 2.15
UBA1-206	ENST00000442035	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.47	■■■□□ 2.15
UBA1-206	ENST00000442035	MAP3K5	Q99683	1374 aa		28.47	■■■□□ 2.15
UBA1-206	ENST00000442035	YY1	P25490	414 aa		28.46	■■■□□ 2.15
UBA1-206	ENST00000442035	NFATC2IP	Q8NCF5	419 aa		28.46	■■■□□ 2.15
UBA1-206	ENST00000442035	TUBGCP6	Q96RT7	1819 aa		28.46	■■■□□ 2.15
UBA1-206	ENST00000442035	U2SURP	O15042	1029 aa	Known RBP	28.45	■■■□□ 2.14
UBA1-206	ENST00000442035	GNPAT	O15228	680 aa		28.45	■■■□□ 2.14
UBA1-206	ENST00000442035	SSFA2	P28290	1259 aa		28.45	■■■□□ 2.14
UBA1-206	ENST00000442035	C4B	P0C0L5	1744 aa		28.44	■■■□□ 2.14
UBA1-206	ENST00000442035	SMIM5	Q71RC9	77 aa		28.42	■■■□□ 2.14
UBA1-206	ENST00000442035	AMIGO3	Q86WK7	504 aa		28.42	■■■□□ 2.14
UBA1-206	ENST00000442035	CFAP53	Q96M91	514 aa		28.42	■■■□□ 2.14
UBA1-206	ENST00000442035	TAF1L	Q8IZX4	1826 aa		28.41	■■■□□ 2.14
UBA1-206	ENST00000442035	PTCD1	O75127	700 aa	Known RBP	28.4	■■■□□ 2.14
UBA1-206	ENST00000442035	GPR162	Q16538	588 aa		28.39	■■■□□ 2.14
UBA1-206	ENST00000442035	MTHFSD	Q2M296	383 aa	Known RBP	28.39	■■■□□ 2.14
UBA1-206	ENST00000442035	SLC4A9	Q96Q91	983 aa		28.39	■■■□□ 2.14
UBA1-206	ENST00000442035	RTCB	Q9Y3I0	505 aa	Known RBP	28.39	■■■□□ 2.14
UBA1-206	ENST00000442035	LGR6	Q9HBX8	967 aa		28.38	■■■□□ 2.13
UBA1-206	ENST00000442035	TRAPPC3L	Q5T215	181 aa		28.37	■■■□□ 2.13
UBA1-206	ENST00000442035	RNMT	O43148	476 aa	Known RBP	28.36	■■■□□ 2.13
UBA1-206	ENST00000442035	RC3H1	Q5TC82	1133 aa	Known RBP	28.36	■■■□□ 2.13
UBA1-206	ENST00000442035	SLC52A2	Q9HAB3	445 aa		28.36	■■■□□ 2.13
UBA1-206	ENST00000442035	PELP1	Q8IZL8	1130 aa	Known RBP	28.35	■■■□□ 2.13
UBA1-206	ENST00000442035	NUDC	Q9Y266	331 aa		28.35	■■■□□ 2.13
UBA1-206	ENST00000442035	COL24A1	Q17RW2	1714 aa		28.35	■■■□□ 2.13
UBA1-206	ENST00000442035	NLGN2	Q8NFZ4	835 aa		28.34	■■■□□ 2.13
UBA1-206	ENST00000442035	PPP2R1A	P30153	589 aa		28.33	■■■□□ 2.13
UBA1-206	ENST00000442035	CNTNAP4	Q9C0A0	1308 aa		28.33	■■■□□ 2.13
UBA1-206	ENST00000442035	COL3A1	P02461	1466 aa	Predicted RBP	28.33	■■■□□ 2.13
UBA1-206	ENST00000442035	GAS2L2	Q8NHY3	880 aa		28.32	■■■□□ 2.12
UBA1-206	ENST00000442035	CD2AP	Q9Y5K6	639 aa		28.32	■■■□□ 2.12
UBA1-206	ENST00000442035	ADRA2B	P18089	450 aa		28.31	■■■□□ 2.12
UBA1-206	ENST00000442035	UBR3	Q6ZT12	1888 aa		28.3	■■■□□ 2.12
UBA1-206	ENST00000442035	RPS6KA4	O75676	772 aa		28.3	■■■□□ 2.12
UBA1-206	ENST00000442035	RFC4	P35249	363 aa		28.29	■■■□□ 2.12
UBA1-206	ENST00000442035	ARHGEF1	Q92888	912 aa	Known RBP	28.28	■■■□□ 2.12
UBA1-206	ENST00000442035	GNAT3	A8MTJ3	354 aa		28.27	■■■□□ 2.12
UBA1-206	ENST00000442035	CRKL	P46109	303 aa	Known RBP	28.27	■■■□□ 2.12
UBA1-206	ENST00000442035	SLC39A6	Q13433	755 aa		28.27	■■■□□ 2.12
UBA1-206	ENST00000442035	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.26	■■■□□ 2.11
UBA1-206	ENST00000442035	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.26	■■■□□ 2.11
UBA1-206	ENST00000442035	NLGN1	Q8N2Q7	840 aa		28.26	■■■□□ 2.11
UBA1-206	ENST00000442035	PRKAR2B	P31323	418 aa		28.25	■■■□□ 2.11
UBA1-206	ENST00000442035	ZNF831	Q5JPB2	1677 aa		28.25	■■■□□ 2.11
UBA1-206	ENST00000442035	SCN11A	Q9UI33	1791 aa		28.24	■■■□□ 2.11
UBA1-206	ENST00000442035	TEF	Q10587	303 aa		28.24	■■■□□ 2.11
UBA1-206	ENST00000442035	MMP10	P09238	476 aa		28.23	■■■□□ 2.11
UBA1-206	ENST00000442035	DNAJC10	Q8IXB1	793 aa		28.23	■■■□□ 2.11
UBA1-206	ENST00000442035	RSPH6A	Q9H0K4	717 aa		28.23	■■■□□ 2.11
UBA1-206	ENST00000442035	GRIN3B	O60391	1043 aa		28.22	■■■□□ 2.11
UBA1-206	ENST00000442035	TTC5	Q8N0Z6	440 aa		28.22	■■■□□ 2.11
UBA1-206	ENST00000442035	IL17RE	Q8NFR9	667 aa		28.21	■■■□□ 2.11
UBA1-206	ENST00000442035	PHACTR3	Q96KR7	559 aa		28.21	■■■□□ 2.11
UBA1-206	ENST00000442035	MRC1	P22897	1456 aa		28.21	■■■□□ 2.11
UBA1-206	ENST00000442035	FCHSD2	O94868	740 aa		28.2	■■■□□ 2.1
UBA1-206	ENST00000442035	INTS5	Q6P9B9	1019 aa	Known RBP	28.19	■■■□□ 2.1
UBA1-206	ENST00000442035	CCDC87	Q9NVE4	849 aa		28.19	■■■□□ 2.1
UBA1-206	ENST00000442035	UTRN	P46939	3433 aa		28.18	■■■□□ 2.1
UBA1-206	ENST00000442035	GYS1	P13807	737 aa		28.18	■■■□□ 2.1
UBA1-206	ENST00000442035	VSIG10	Q8N0Z9	540 aa		28.18	■■■□□ 2.1
UBA1-206	ENST00000442035	YBX3	P16989	372 aa	Known RBP eCLIP	28.17	■■■□□ 2.1	2e-7	■□□□□ 9.3
UBA1-206	ENST00000442035	COL5A3	P25940	1745 aa	Predicted RBP	28.16	■■■□□ 2.1
UBA1-206	ENST00000442035	CYP19A1	P11511	503 aa	Predicted RBP	28.16	■■■□□ 2.1
UBA1-206	ENST00000442035	PARP3	Q9Y6F1	533 aa		28.16	■■■□□ 2.1
UBA1-206	ENST00000442035	RTF1	Q92541	710 aa	Known RBP	28.15	■■■□□ 2.1
UBA1-206	ENST00000442035	ZNF790	Q6PG37	636 aa		28.14	■■■□□ 2.1
UBA1-206	ENST00000442035	SRP68	Q9UHB9	627 aa	Known RBP	28.14	■■■□□ 2.1
UBA1-206	ENST00000442035	ZPR1	O75312	459 aa		28.13	■■■□□ 2.09
UBA1-206	ENST00000442035	STARD3NL	O95772	234 aa		28.13	■■■□□ 2.09
UBA1-206	ENST00000442035	NEFM	P07197	916 aa		28.13	■■■□□ 2.09
UBA1-206	ENST00000442035	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.12	■■■□□ 2.09
UBA1-206	ENST00000442035	ADAMTS7	Q9UKP4	1686 aa		28.12	■■■□□ 2.09
UBA1-206	ENST00000442035	USP42	Q9H9J4	1324 aa	Known RBP	28.12	■■■□□ 2.09
UBA1-206	ENST00000442035	MYH14	Q7Z406	1995 aa	Known RBP	28.11	■■■□□ 2.09
UBA1-206	ENST00000442035	KCP	Q6ZWJ8	1503 aa		28.1	■■■□□ 2.09
UBA1-206	ENST00000442035	BTBD11	A6QL63	1104 aa		28.1	■■■□□ 2.09
UBA1-206	ENST00000442035	ZNF496	Q96IT1	587 aa	Predicted RBP	28.1	■■■□□ 2.09
UBA1-206	ENST00000442035	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.1	■■■□□ 2.09
UBA1-206	ENST00000442035	SOS1	Q07889	1333 aa	Predicted RBP	28.1	■■■□□ 2.09
UBA1-206	ENST00000442035	TJP1	Q07157	1748 aa		28.09	■■■□□ 2.09
UBA1-206	ENST00000442035	FKBP8	Q14318	412 aa		28.09	■■■□□ 2.09
UBA1-206	ENST00000442035	WWC3	Q9ULE0	1092 aa		28.09	■■■□□ 2.09
UBA1-206	ENST00000442035	ZBTB1	Q9Y2K1	713 aa		28.09	■■■□□ 2.09
UBA1-206	ENST00000442035	CEMIP	Q8WUJ3	1361 aa		28.09	■■■□□ 2.09
UBA1-206	ENST00000442035	TGFB2	P61812	414 aa		28.08	■■■□□ 2.09
UBA1-206	ENST00000442035	DDX10	Q13206	875 aa	Known RBP	28.08	■■■□□ 2.09
UBA1-206	ENST00000442035	FMNL2	Q96PY5	1086 aa		28.08	■■■□□ 2.09
UBA1-206	ENST00000442035	CANX	P27824	592 aa	Known RBP	28.07	■■■□□ 2.08
UBA1-206	ENST00000442035	RALBP1	Q15311	655 aa		28.07	■■■□□ 2.08
UBA1-206	ENST00000442035	USPL1	Q5W0Q7	1092 aa		28.07	■■■□□ 2.08
UBA1-206	ENST00000442035	CIC	Q96RK0	1608 aa	Predicted RBP	28.07	■■■□□ 2.08
UBA1-206	ENST00000442035	HTATSF1	O43719	755 aa	Known RBP	28.06	■■■□□ 2.08
UBA1-206	ENST00000442035	MCM10	Q7L590	875 aa		28.06	■■■□□ 2.08
UBA1-206	ENST00000442035	HEG1	Q9ULI3	1381 aa		28.06	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms