RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
NELFE-205ENST00000441998 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
NELFE-205ENST00000441998 ITPK1Q13572 414 aa15□□□□□ -0.01
NELFE-205ENST00000441998 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
NELFE-205ENST00000441998 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
NELFE-205ENST00000441998 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
NELFE-205ENST00000441998 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
NELFE-205ENST00000441998 TOGARAM1Q9Y4F4 1720 aa14.99□□□□□ -0.01
NELFE-205ENST00000441998 HMOX1P09601 288 aa14.98□□□□□ -0.01
NELFE-205ENST00000441998 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
NELFE-205ENST00000441998 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
NELFE-205ENST00000441998 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
NELFE-205ENST00000441998 SLC4A9Q96Q91 983 aa14.98□□□□□ -0.01
NELFE-205ENST00000441998 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
NELFE-205ENST00000441998 RTCBQ9Y3I0 505 aaKnown RBP14.98□□□□□ -0.01
NELFE-205ENST00000441998 GNPATO15228 680 aa14.97□□□□□ -0.01
NELFE-205ENST00000441998 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
NELFE-205ENST00000441998 RPS6KA4O75676 772 aa14.97□□□□□ -0.01
NELFE-205ENST00000441998 YY1P25490 414 aa14.97□□□□□ -0.01
NELFE-205ENST00000441998 NLGN1Q8N2Q7 840 aa14.97□□□□□ -0.01
NELFE-205ENST00000441998 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
NELFE-205ENST00000441998 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
NELFE-205ENST00000441998 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
NELFE-205ENST00000441998 ITGB4P16144 1822 aa14.96□□□□□ -0.01
NELFE-205ENST00000441998 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
NELFE-205ENST00000441998 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
NELFE-205ENST00000441998 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
NELFE-205ENST00000441998 FCHSD2O94868 740 aa14.95□□□□□ -0.02
NELFE-205ENST00000441998 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
NELFE-205ENST00000441998 C5P01031 1676 aa14.94□□□□□ -0.02
NELFE-205ENST00000441998 ZNF831Q5JPB2 1677 aa14.94□□□□□ -0.02
NELFE-205ENST00000441998 GRIN3BO60391 1043 aa14.94□□□□□ -0.02
NELFE-205ENST00000441998 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
NELFE-205ENST00000441998 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
NELFE-205ENST00000441998 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
NELFE-205ENST00000441998 PHF14O94880 888 aa14.93□□□□□ -0.02
NELFE-205ENST00000441998 GPR162Q16538 588 aa14.93□□□□□ -0.02
NELFE-205ENST00000441998 RFC4P35249 363 aa14.92□□□□□ -0.02
NELFE-205ENST00000441998 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
NELFE-205ENST00000441998 ARHGEF1Q92888 912 aaKnown RBP14.92□□□□□ -0.02
NELFE-205ENST00000441998 MRC1P22897 1456 aa14.91□□□□□ -0.02
NELFE-205ENST00000441998 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
NELFE-205ENST00000441998 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
NELFE-205ENST00000441998 TAF1LQ8IZX4 1826 aa14.9□□□□□ -0.02
NELFE-205ENST00000441998 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
NELFE-205ENST00000441998 CRKLP46109 303 aaKnown RBP14.9□□□□□ -0.02
NELFE-205ENST00000441998 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
NELFE-205ENST00000441998 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
NELFE-205ENST00000441998 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
NELFE-205ENST00000441998 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
NELFE-205ENST00000441998 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
NELFE-205ENST00000441998 TEFQ10587 303 aa14.89□□□□□ -0.03
NELFE-205ENST00000441998 NLGN2Q8NFZ4 835 aa14.89□□□□□ -0.03
NELFE-205ENST00000441998 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 MMP10P09238 476 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 GYS1P13807 737 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 TGFB2P61812 414 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
NELFE-205ENST00000441998 RALBP1Q15311 655 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 INTS5Q6P9B9 1019 aaKnown RBP14.88□□□□□ -0.03
NELFE-205ENST00000441998 TTC5Q8N0Z6 440 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 PNNQ9H307 717 aaKnown RBP14.88□□□□□ -0.03
NELFE-205ENST00000441998 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
NELFE-205ENST00000441998 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 UTRNP46939 3433 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 STARD3NLO95772 234 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 CYP19A1P11511 503 aaPredicted RBP14.87□□□□□ -0.03
NELFE-205ENST00000441998 ZNF790Q6PG37 636 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
NELFE-205ENST00000441998 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
NELFE-205ENST00000441998 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
NELFE-205ENST00000441998 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
NELFE-205ENST00000441998 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
NELFE-205ENST00000441998 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
NELFE-205ENST00000441998 ADAMTS7Q9UKP4 1686 aa14.85□□□□□ -0.03
NELFE-205ENST00000441998 NEFMP07197 916 aa14.85□□□□□ -0.03
NELFE-205ENST00000441998 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
NELFE-205ENST00000441998 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
NELFE-205ENST00000441998 ZPR1O75312 459 aa14.84□□□□□ -0.03
NELFE-205ENST00000441998 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
NELFE-205ENST00000441998 PARP3Q9Y6F1 533 aa14.84□□□□□ -0.03
NELFE-205ENST00000441998 SOS1Q07889 1333 aaPredicted RBP14.84□□□□□ -0.03
NELFE-205ENST00000441998 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.03
NELFE-205ENST00000441998 A0A087WZG4 1122 aa14.83□□□□□ -0.04
NELFE-205ENST00000441998 YBX3P16989 372 aaKnown RBP eCLIP14.83□□□□□ -0.042e-7■■■■□ 20.6
NELFE-205ENST00000441998 NARFQ9UHQ1 456 aa14.83□□□□□ -0.04
NELFE-205ENST00000441998 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
NELFE-205ENST00000441998 TM4SF1P30408 202 aa14.82□□□□□ -0.04
NELFE-205ENST00000441998 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
NELFE-205ENST00000441998 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
NELFE-205ENST00000441998 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
NELFE-205ENST00000441998 HEG1Q9ULI3 1381 aa14.82□□□□□ -0.04
NELFE-205ENST00000441998 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
NELFE-205ENST00000441998 EIF5P55010 431 aaKnown RBP14.81□□□□□ -0.04
NELFE-205ENST00000441998 IL6STP40189 918 aaPredicted RBP14.8□□□□□ -0.04
NELFE-205ENST00000441998 FKBP8Q14318 412 aa14.8□□□□□ -0.04
NELFE-205ENST00000441998 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
NELFE-205ENST00000441998 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
NELFE-205ENST00000441998 RGL2O15211 777 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms