RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 MPHOSPH9Q99550 1183 aa10.8□□□□□ -0.68
EPHA4-208ENST00000441679 RICTORQ6R327 1708 aa10.79□□□□□ -0.68
EPHA4-208ENST00000441679 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
EPHA4-208ENST00000441679 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-208ENST00000441679 LMOD1P29536 600 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-208ENST00000441679 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
EPHA4-208ENST00000441679 TRAIPQ9BWF2 469 aa10.78□□□□□ -0.68
EPHA4-208ENST00000441679 COL17A1Q9UMD9 1497 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-208ENST00000441679 REREQ9P2R6 1566 aa10.77□□□□□ -0.68
EPHA4-208ENST00000441679 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.77□□□□□ -0.69
EPHA4-208ENST00000441679 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
EPHA4-208ENST00000441679 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
EPHA4-208ENST00000441679 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
EPHA4-208ENST00000441679 AGLP35573 1532 aa10.77□□□□□ -0.69
EPHA4-208ENST00000441679 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.69
EPHA4-208ENST00000441679 EIF2AK4Q9P2K8 1649 aaKnown RBP10.76□□□□□ -0.69
EPHA4-208ENST00000441679 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
EPHA4-208ENST00000441679 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
EPHA4-208ENST00000441679 ATP9BO43861 1147 aa10.75□□□□□ -0.69
EPHA4-208ENST00000441679 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
EPHA4-208ENST00000441679 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-208ENST00000441679 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
EPHA4-208ENST00000441679 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
EPHA4-208ENST00000441679 NFATC2IPQ8NCF5 419 aa10.74□□□□□ -0.69
EPHA4-208ENST00000441679 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
EPHA4-208ENST00000441679 S1PR4O95977 384 aa10.73□□□□□ -0.69
EPHA4-208ENST00000441679 ZBTB33Q86T24 672 aa10.73□□□□□ -0.69
EPHA4-208ENST00000441679 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
EPHA4-208ENST00000441679 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
EPHA4-208ENST00000441679 YEATS2Q9ULM3 1422 aa10.73□□□□□ -0.69
EPHA4-208ENST00000441679 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
EPHA4-208ENST00000441679 PTCRAQ6ISU1 281 aaPredicted RBP10.72□□□□□ -0.69
EPHA4-208ENST00000441679 SLC52A1Q9NWF4 448 aa10.72□□□□□ -0.69
EPHA4-208ENST00000441679 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
EPHA4-208ENST00000441679 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
EPHA4-208ENST00000441679 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
EPHA4-208ENST00000441679 FRMPD1Q5SYB0 1578 aa10.71□□□□□ -0.69
EPHA4-208ENST00000441679 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
EPHA4-208ENST00000441679 ADAM32Q8TC27 787 aa10.71□□□□□ -0.69
EPHA4-208ENST00000441679 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
EPHA4-208ENST00000441679 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
EPHA4-208ENST00000441679 SKIP12755 728 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
EPHA4-208ENST00000441679 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
EPHA4-208ENST00000441679 PIK3CDO00329 1044 aa10.69□□□□□ -0.7
EPHA4-208ENST00000441679 MLECQ14165 292 aa10.69□□□□□ -0.7
EPHA4-208ENST00000441679 AGERQ15109 404 aa10.69□□□□□ -0.7
EPHA4-208ENST00000441679 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
EPHA4-208ENST00000441679 USTQ9Y2C2 406 aa10.69□□□□□ -0.7
EPHA4-208ENST00000441679 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
EPHA4-208ENST00000441679 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
EPHA4-208ENST00000441679 BPHLQ86WA6 291 aaPredicted RBP10.68□□□□□ -0.7
EPHA4-208ENST00000441679 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
EPHA4-208ENST00000441679 VRTNQ9H8Y1 702 aa10.68□□□□□ -0.7
EPHA4-208ENST00000441679 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
EPHA4-208ENST00000441679 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 ATG7O95352 703 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 KCNC4Q03721 635 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 RNF135Q8IUD6 432 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 BAP1Q92560 729 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
EPHA4-208ENST00000441679 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 UNC13BO14795 1591 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 USP17L3A6NCW0 530 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 USP17L4A6NCW7 530 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 USP17L1Q7RTZ2 530 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 PLEKHM2Q8IWE5 1019 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 ZNF511Q8NB15 262 aa10.66□□□□□ -0.7
EPHA4-208ENST00000441679 RNF17Q9BXT8 1623 aaKnown RBP10.66□□□□□ -0.7
EPHA4-208ENST00000441679 PRDM15P57071 1507 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-208ENST00000441679 GGCXP38435 758 aa10.65□□□□□ -0.7
EPHA4-208ENST00000441679 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
EPHA4-208ENST00000441679 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
EPHA4-208ENST00000441679 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
EPHA4-208ENST00000441679 ZBTB24O43167 697 aaPredicted RBP10.64□□□□□ -0.71
EPHA4-208ENST00000441679 LZTS3O60299 673 aaPredicted RBP10.64□□□□□ -0.71
EPHA4-208ENST00000441679 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
EPHA4-208ENST00000441679 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
EPHA4-208ENST00000441679 IQGAP3Q86VI3 1631 aa10.64□□□□□ -0.71
EPHA4-208ENST00000441679 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
EPHA4-208ENST00000441679 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
EPHA4-208ENST00000441679 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
EPHA4-208ENST00000441679 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
EPHA4-208ENST00000441679 NEUROD1Q13562 356 aa10.63□□□□□ -0.71
EPHA4-208ENST00000441679 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
EPHA4-208ENST00000441679 PZPP20742 1482 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 VWDEQ8N2E2 1590 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms