RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
CPSF4-206ENST00000441580 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
CPSF4-206ENST00000441580 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
CPSF4-206ENST00000441580 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
CPSF4-206ENST00000441580 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
CPSF4-206ENST00000441580 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
CPSF4-206ENST00000441580 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
CPSF4-206ENST00000441580 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
CPSF4-206ENST00000441580 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
CPSF4-206ENST00000441580 PRDM11Q9NQV5 511 aa16.56■□□□□ 0.24
CPSF4-206ENST00000441580 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
CPSF4-206ENST00000441580 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
CPSF4-206ENST00000441580 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
CPSF4-206ENST00000441580 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
CPSF4-206ENST00000441580 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
CPSF4-206ENST00000441580 FLIIQ13045 1269 aa16.55■□□□□ 0.24
CPSF4-206ENST00000441580 COL14A1Q05707 1796 aaKnown RBP16.55■□□□□ 0.24
CPSF4-206ENST00000441580 PLCH1Q4KWH8 1693 aa16.55■□□□□ 0.24
CPSF4-206ENST00000441580 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
CPSF4-206ENST00000441580 LTBP4Q8N2S1 1624 aa16.54■□□□□ 0.24
CPSF4-206ENST00000441580 NUCB1Q02818 461 aa16.53■□□□□ 0.24
CPSF4-206ENST00000441580 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
CPSF4-206ENST00000441580 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
CPSF4-206ENST00000441580 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
CPSF4-206ENST00000441580 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
CPSF4-206ENST00000441580 PHKG2P15735 406 aa16.52■□□□□ 0.24
CPSF4-206ENST00000441580 FKBP5Q13451 457 aaPredicted RBP16.52■□□□□ 0.24
CPSF4-206ENST00000441580 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
CPSF4-206ENST00000441580 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.24
CPSF4-206ENST00000441580 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
CPSF4-206ENST00000441580 IPO9Q96P70 1041 aaKnown RBP16.52■□□□□ 0.24
CPSF4-206ENST00000441580 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
CPSF4-206ENST00000441580 C5P01031 1676 aa16.52■□□□□ 0.23
CPSF4-206ENST00000441580 PAPPAQ13219 1627 aa16.52■□□□□ 0.23
CPSF4-206ENST00000441580 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
CPSF4-206ENST00000441580 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
CPSF4-206ENST00000441580 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
CPSF4-206ENST00000441580 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
CPSF4-206ENST00000441580 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
CPSF4-206ENST00000441580 HMMRO75330 724 aa16.5■□□□□ 0.23
CPSF4-206ENST00000441580 G2E3Q7L622 706 aa16.5■□□□□ 0.23
CPSF4-206ENST00000441580 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
CPSF4-206ENST00000441580 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
CPSF4-206ENST00000441580 GNAI3P08754 354 aa16.49■□□□□ 0.23
CPSF4-206ENST00000441580 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
CPSF4-206ENST00000441580 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
CPSF4-206ENST00000441580 GLI3P10071 1580 aa16.48■□□□□ 0.23
CPSF4-206ENST00000441580 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
CPSF4-206ENST00000441580 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
CPSF4-206ENST00000441580 MEIS3Q99687 375 aa16.48■□□□□ 0.23
CPSF4-206ENST00000441580 COL16A1Q07092 1604 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-206ENST00000441580 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
CPSF4-206ENST00000441580 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
CPSF4-206ENST00000441580 UPF2Q9HAU5 1272 aaKnown RBP16.47■□□□□ 0.23
CPSF4-206ENST00000441580 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
CPSF4-206ENST00000441580 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
CPSF4-206ENST00000441580 GNAI2P04899 355 aa16.46■□□□□ 0.23
CPSF4-206ENST00000441580 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
CPSF4-206ENST00000441580 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
CPSF4-206ENST00000441580 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
CPSF4-206ENST00000441580 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-206ENST00000441580 PHLPP1O60346 1717 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 F6X3S4 739 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 MSH5O43196 834 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-206ENST00000441580 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-206ENST00000441580 LRP6O75581 1613 aa16.45■□□□□ 0.22
CPSF4-206ENST00000441580 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
CPSF4-206ENST00000441580 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
CPSF4-206ENST00000441580 CYP27B1O15528 508 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 KCNQ3O43525 872 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 IL2RBP14784 551 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
CPSF4-206ENST00000441580 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 ANKRD45Q5TZF3 282 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
CPSF4-206ENST00000441580 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
CPSF4-206ENST00000441580 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
CPSF4-206ENST00000441580 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
CPSF4-206ENST00000441580 ADCY9O60503 1353 aa16.41■□□□□ 0.22
CPSF4-206ENST00000441580 DDX58O95786 925 aaKnown RBP16.41■□□□□ 0.22
CPSF4-206ENST00000441580 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
CPSF4-206ENST00000441580 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
CPSF4-206ENST00000441580 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
CPSF4-206ENST00000441580 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
CPSF4-206ENST00000441580 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-206ENST00000441580 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
CPSF4-206ENST00000441580 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
CPSF4-206ENST00000441580 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
CPSF4-206ENST00000441580 ALDH1L1O75891 902 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms