RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DMTNQ08495 405 aa24.62■■□□□ 1.53
SHOX2-203ENST00000441443 KRT24Q2M2I5 525 aa24.62■■□□□ 1.53
SHOX2-203ENST00000441443 TSHZ3Q63HK5 1081 aa24.61■■□□□ 1.53
SHOX2-203ENST00000441443 SYAP1Q96A49 352 aaPredicted RBP24.61■■□□□ 1.53
SHOX2-203ENST00000441443 AGLP35573 1532 aa24.61■■□□□ 1.53
SHOX2-203ENST00000441443 PIBF1Q8WXW3 757 aa24.61■■□□□ 1.53
SHOX2-203ENST00000441443 LTKP29376 864 aa24.61■■□□□ 1.53
SHOX2-203ENST00000441443 ATP10DQ9P241 1426 aa24.6■■□□□ 1.53
SHOX2-203ENST00000441443 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
SHOX2-203ENST00000441443 PALD1Q9ULE6 856 aa24.6■■□□□ 1.53
SHOX2-203ENST00000441443 SPATA31D1Q6ZQQ2 1576 aa24.59■■□□□ 1.53
SHOX2-203ENST00000441443 RPAP2Q8IXW5 612 aaPredicted RBP24.59■■□□□ 1.53
SHOX2-203ENST00000441443 MEIS3Q99687 375 aa24.59■■□□□ 1.53
SHOX2-203ENST00000441443 USP48Q86UV5 1035 aa24.59■■□□□ 1.53
SHOX2-203ENST00000441443 PRIMPOLQ96LW4 560 aa24.59■■□□□ 1.53
SHOX2-203ENST00000441443 IL13P35225 146 aa24.58■■□□□ 1.53
SHOX2-203ENST00000441443 ADCY5O95622 1261 aa24.58■■□□□ 1.52
SHOX2-203ENST00000441443 PPP4R3BQ5MIZ7 849 aa24.58■■□□□ 1.52
SHOX2-203ENST00000441443 AEBP1Q8IUX7 1158 aa24.58■■□□□ 1.52
SHOX2-203ENST00000441443 PLEKHG5O94827 1062 aa24.57■■□□□ 1.52
SHOX2-203ENST00000441443 ATP2B3Q16720 1220 aa24.56■■□□□ 1.52
SHOX2-203ENST00000441443 ROBO2Q9HCK4 1378 aa24.56■■□□□ 1.52
SHOX2-203ENST00000441443 PLCB2Q00722 1185 aa24.56■■□□□ 1.52
SHOX2-203ENST00000441443 HMGN5P82970 282 aaKnown RBP24.56■■□□□ 1.52
SHOX2-203ENST00000441443 UPF3BQ9BZI7 483 aaKnown RBP24.56■■□□□ 1.52
SHOX2-203ENST00000441443 CUL4AQ13619 759 aa24.55■■□□□ 1.52
SHOX2-203ENST00000441443 UTP14CQ5TAP6 766 aaKnown RBP24.55■■□□□ 1.52
SHOX2-203ENST00000441443 MSH6P52701 1360 aa24.55■■□□□ 1.52
SHOX2-203ENST00000441443 PHF14O94880 888 aa24.55■■□□□ 1.52
SHOX2-203ENST00000441443 HCLS1P14317 486 aaPredicted RBP24.55■■□□□ 1.52
SHOX2-203ENST00000441443 EDC4Q6P2E9 1401 aaKnown RBP24.55■■□□□ 1.52
SHOX2-203ENST00000441443 KIF3AQ9Y496 699 aa24.54■■□□□ 1.52
SHOX2-203ENST00000441443 ATP7BP35670 1465 aa24.54■■□□□ 1.52
SHOX2-203ENST00000441443 PDE1AP54750 535 aa24.54■■□□□ 1.52
SHOX2-203ENST00000441443 SULT6B1Q6IMI4 303 aa24.54■■□□□ 1.52
SHOX2-203ENST00000441443 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
SHOX2-203ENST00000441443 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
SHOX2-203ENST00000441443 MAP2P11137 1827 aaKnown RBP24.53■■□□□ 1.52
SHOX2-203ENST00000441443 ACEP12821 1306 aa24.53■■□□□ 1.52
SHOX2-203ENST00000441443 SPDYE4A6NLX3 237 aa24.53■■□□□ 1.52
SHOX2-203ENST00000441443 ANO2Q9NQ90 1003 aa24.53■■□□□ 1.52
SHOX2-203ENST00000441443 KIF24Q5T7B8 1368 aa24.52■■□□□ 1.52
SHOX2-203ENST00000441443 MCM2P49736 904 aa24.52■■□□□ 1.52
SHOX2-203ENST00000441443 GTF2F1P35269 517 aaKnown RBP eCLIP24.52■■□□□ 1.52
SHOX2-203ENST00000441443 BCL2L12Q9HB09 334 aa24.52■■□□□ 1.52
SHOX2-203ENST00000441443 CPS1P31327 1500 aa24.52■■□□□ 1.52
SHOX2-203ENST00000441443 ANKRD26Q9UPS8 1709 aa24.51■■□□□ 1.51
SHOX2-203ENST00000441443 CPSF1Q10570 1443 aaKnown RBP24.51■■□□□ 1.51
SHOX2-203ENST00000441443 FAM184AQ8NB25 1140 aa24.51■■□□□ 1.51
SHOX2-203ENST00000441443 ESYT1Q9BSJ8 1104 aa24.51■■□□□ 1.51
SHOX2-203ENST00000441443 KIF20BQ96Q89 1820 aa24.5■■□□□ 1.51
SHOX2-203ENST00000441443 FKBP5Q13451 457 aaPredicted RBP24.5■■□□□ 1.51
SHOX2-203ENST00000441443 UVSSAQ2YD98 709 aa24.5■■□□□ 1.51
SHOX2-203ENST00000441443 HSP90AB2PQ58FF8 381 aa24.5■■□□□ 1.51
SHOX2-203ENST00000441443 CDC42BPGQ6DT37 1551 aa24.5■■□□□ 1.51
SHOX2-203ENST00000441443 DLC1Q96QB1 1528 aa24.49■■□□□ 1.51
SHOX2-203ENST00000441443 EID1Q9Y6B2 187 aa24.49■■□□□ 1.51
SHOX2-203ENST00000441443 RILPL2Q969X0 211 aa24.49■■□□□ 1.51
SHOX2-203ENST00000441443 INTS4Q96HW7 963 aaKnown RBP24.49■■□□□ 1.51
SHOX2-203ENST00000441443 EXOC6BQ9Y2D4 811 aa24.49■■□□□ 1.51
SHOX2-203ENST00000441443 CNPY2Q9Y2B0 182 aa24.48■■□□□ 1.51
SHOX2-203ENST00000441443 MCCP23508 829 aa24.48■■□□□ 1.51
SHOX2-203ENST00000441443 NUTM2GQ5VZR2 741 aa24.48■■□□□ 1.51
SHOX2-203ENST00000441443 RGS12O14924 1447 aa24.48■■□□□ 1.51
SHOX2-203ENST00000441443 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
SHOX2-203ENST00000441443 TTC21BQ7Z4L5 1316 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 MCM10Q7L590 875 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 SRCIN1Q9C0H9 1055 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 TRIM6-TRIM34B2RNG4 842 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 CCDC183Q5T5S1 534 aa24.47■■□□□ 1.51
SHOX2-203ENST00000441443 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
SHOX2-203ENST00000441443 SLC4A10Q6U841 1118 aa24.46■■□□□ 1.51
SHOX2-203ENST00000441443 SPTLC3Q9NUV7 552 aa24.46■■□□□ 1.51
SHOX2-203ENST00000441443 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
SHOX2-203ENST00000441443 NGDNQ8NEJ9 315 aaKnown RBP24.46■■□□□ 1.51
SHOX2-203ENST00000441443 WDR33Q9C0J8 1336 aaKnown RBP24.45■■□□□ 1.51
SHOX2-203ENST00000441443 IGSF3O75054 1194 aa24.45■■□□□ 1.5
SHOX2-203ENST00000441443 OSBPL3Q9H4L5 887 aa24.45■■□□□ 1.5
SHOX2-203ENST00000441443 PDCL2Q8N4E4 241 aa24.45■■□□□ 1.5
SHOX2-203ENST00000441443 KDM4AO75164 1064 aa24.44■■□□□ 1.5
SHOX2-203ENST00000441443 TCHHQ07283 1943 aa24.44■■□□□ 1.5
SHOX2-203ENST00000441443 HMMRO75330 724 aa24.44■■□□□ 1.5
SHOX2-203ENST00000441443 PYCARDQ9ULZ3 195 aa24.44■■□□□ 1.5
SHOX2-203ENST00000441443 MX1P20591 662 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 LARP6Q9BRS8 491 aaKnown RBP24.43■■□□□ 1.5
SHOX2-203ENST00000441443 MIS18AQ9NYP9 233 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 F6X3S4 739 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 RIOK3O14730 519 aaKnown RBP24.43■■□□□ 1.5
SHOX2-203ENST00000441443 SPC24Q8NBT2 197 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 AP5Z1O43299 807 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 DTNBO60941 627 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 U2AF2P26368 475 aaKnown RBP eCLIP24.43■■□□□ 1.5
SHOX2-203ENST00000441443 GIMAP6Q6P9H5 292 aa24.43■■□□□ 1.5
SHOX2-203ENST00000441443 RBM33Q96EV2 1170 aaKnown RBP24.43■■□□□ 1.5
SHOX2-203ENST00000441443 GTPBP4Q9BZE4 634 aaKnown RBP24.43■■□□□ 1.5
SHOX2-203ENST00000441443 SETD1AO15047 1707 aaKnown RBP24.42■■□□□ 1.5
SHOX2-203ENST00000441443 CHMLP26374 656 aa24.42■■□□□ 1.5
SHOX2-203ENST00000441443 SLC4A2P04920 1241 aa24.41■■□□□ 1.5
SHOX2-203ENST00000441443 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms