RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 PARP3Q9Y6F1 533 aa12.61□□□□□ -0.39
GABRE-203ENST00000441219 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
GABRE-203ENST00000441219 RASSF7Q02833 373 aa12.6□□□□□ -0.39
GABRE-203ENST00000441219 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
GABRE-203ENST00000441219 COG3Q96JB2 828 aa12.6□□□□□ -0.39
GABRE-203ENST00000441219 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
GABRE-203ENST00000441219 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
GABRE-203ENST00000441219 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
GABRE-203ENST00000441219 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
GABRE-203ENST00000441219 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
GABRE-203ENST00000441219 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
GABRE-203ENST00000441219 GYS1P13807 737 aa12.58□□□□□ -0.4
GABRE-203ENST00000441219 CHRNA5P30532 468 aa12.58□□□□□ -0.4
GABRE-203ENST00000441219 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
GABRE-203ENST00000441219 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
GABRE-203ENST00000441219 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
GABRE-203ENST00000441219 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
GABRE-203ENST00000441219 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 N4BP2Q86UW6 1770 aaPredicted RBP12.57□□□□□ -0.4
GABRE-203ENST00000441219 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
GABRE-203ENST00000441219 ABHD8Q96I13 439 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
GABRE-203ENST00000441219 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
GABRE-203ENST00000441219 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
GABRE-203ENST00000441219 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
GABRE-203ENST00000441219 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
GABRE-203ENST00000441219 RFC4P35249 363 aa12.55□□□□□ -0.4
GABRE-203ENST00000441219 LBX1P52954 281 aa12.55□□□□□ -0.4
GABRE-203ENST00000441219 L3MBTL2Q969R5 705 aa12.55□□□□□ -0.4
GABRE-203ENST00000441219 LMNB1P20700 586 aa12.54□□□□□ -0.4
GABRE-203ENST00000441219 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
GABRE-203ENST00000441219 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
GABRE-203ENST00000441219 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
GABRE-203ENST00000441219 POTECB2RU33 542 aa12.53□□□□□ -0.4
GABRE-203ENST00000441219 ADRA2BP18089 450 aa12.53□□□□□ -0.4
GABRE-203ENST00000441219 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
GABRE-203ENST00000441219 CNTNAP1P78357 1384 aa12.53□□□□□ -0.4
GABRE-203ENST00000441219 KIF13BQ9NQT8 1826 aa12.52□□□□□ -0.4
GABRE-203ENST00000441219 DDR1Q08345 913 aa12.52□□□□□ -0.41
GABRE-203ENST00000441219 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
GABRE-203ENST00000441219 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
GABRE-203ENST00000441219 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
GABRE-203ENST00000441219 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
GABRE-203ENST00000441219 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
GABRE-203ENST00000441219 FKBP8Q14318 412 aa12.51□□□□□ -0.41
GABRE-203ENST00000441219 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
GABRE-203ENST00000441219 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
GABRE-203ENST00000441219 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
GABRE-203ENST00000441219 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
GABRE-203ENST00000441219 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
GABRE-203ENST00000441219 VEGFBP49765 207 aa12.5□□□□□ -0.41
GABRE-203ENST00000441219 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
GABRE-203ENST00000441219 INSRP06213 1382 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 KDRP35968 1356 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
GABRE-203ENST00000441219 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 RGPD2P0DJD1 1756 aa12.49□□□□□ -0.41
GABRE-203ENST00000441219 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
GABRE-203ENST00000441219 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
GABRE-203ENST00000441219 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
GABRE-203ENST00000441219 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
GABRE-203ENST00000441219 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
GABRE-203ENST00000441219 NFKBIEO00221 500 aa12.47□□□□□ -0.41
GABRE-203ENST00000441219 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
GABRE-203ENST00000441219 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.42
GABRE-203ENST00000441219 FLT4P35916 1363 aa12.46□□□□□ -0.42
GABRE-203ENST00000441219 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
GABRE-203ENST00000441219 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
GABRE-203ENST00000441219 PHKG2P15735 406 aa12.45□□□□□ -0.42
GABRE-203ENST00000441219 RGS19P49795 217 aa12.45□□□□□ -0.42
GABRE-203ENST00000441219 IFNL2Q8IZJ0 200 aa12.45□□□□□ -0.42
GABRE-203ENST00000441219 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
GABRE-203ENST00000441219 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
GABRE-203ENST00000441219 PASKQ96RG2 1323 aa12.44□□□□□ -0.42
GABRE-203ENST00000441219 FYB1O15117 783 aa12.44□□□□□ -0.42
GABRE-203ENST00000441219 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
GABRE-203ENST00000441219 TMEM88BA6NKF7 163 aa12.43□□□□□ -0.42
GABRE-203ENST00000441219 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
GABRE-203ENST00000441219 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
GABRE-203ENST00000441219 ITGB4P16144 1822 aa12.42□□□□□ -0.42
GABRE-203ENST00000441219 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
GABRE-203ENST00000441219 TM4SF1P30408 202 aa12.42□□□□□ -0.42
GABRE-203ENST00000441219 PUS7Q96PZ0 661 aaKnown RBP12.42□□□□□ -0.42
GABRE-203ENST00000441219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.429e-9■□□□□ 10.9
GABRE-203ENST00000441219 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
GABRE-203ENST00000441219 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
GABRE-203ENST00000441219 PTCD1O75127 700 aaKnown RBP12.41□□□□□ -0.42
GABRE-203ENST00000441219 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
GABRE-203ENST00000441219 SIN3AQ96ST3 1273 aa12.41□□□□□ -0.42
GABRE-203ENST00000441219 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
GABRE-203ENST00000441219 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
GABRE-203ENST00000441219 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
GABRE-203ENST00000441219 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
GABRE-203ENST00000441219 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.42
GABRE-203ENST00000441219 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms