RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 CABP4P57796 275 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 SLFN5Q08AF3 891 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 MRC1P22897 1456 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
PLOD3-205ENST00000440925 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
PLOD3-205ENST00000440925 IL16Q14005 1332 aa19.5■□□□□ 0.71
PLOD3-205ENST00000440925 VIRMAQ69YN4 1812 aaKnown RBP19.49■□□□□ 0.71
PLOD3-205ENST00000440925 SBF2Q86WG5 1849 aa19.49■□□□□ 0.71
PLOD3-205ENST00000440925 TRIM37O94972 964 aa19.49■□□□□ 0.71
PLOD3-205ENST00000440925 BCL11BQ9C0K0 894 aaPredicted RBP19.49■□□□□ 0.71
PLOD3-205ENST00000440925 MBIPQ9NS73 344 aa19.49■□□□□ 0.71
PLOD3-205ENST00000440925 SIPA1L3O60292 1781 aaPredicted RBP19.49■□□□□ 0.71
PLOD3-205ENST00000440925 ITGB4P16144 1822 aa19.48■□□□□ 0.71
PLOD3-205ENST00000440925 TEFQ10587 303 aa19.48■□□□□ 0.71
PLOD3-205ENST00000440925 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
PLOD3-205ENST00000440925 BTBD11A6QL63 1104 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 SOCS7O14512 581 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 GOLGA2Q08379 1002 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
PLOD3-205ENST00000440925 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
PLOD3-205ENST00000440925 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
PLOD3-205ENST00000440925 DOT1LQ8TEK3 1739 aa19.47■□□□□ 0.71
PLOD3-205ENST00000440925 KRT24Q2M2I5 525 aa19.46■□□□□ 0.71
PLOD3-205ENST00000440925 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
PLOD3-205ENST00000440925 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
PLOD3-205ENST00000440925 PROM2Q8N271 834 aa19.45■□□□□ 0.7
PLOD3-205ENST00000440925 BABAM1Q9NWV8 329 aa19.45■□□□□ 0.7
PLOD3-205ENST00000440925 HEG1Q9ULI3 1381 aa19.44■□□□□ 0.7
PLOD3-205ENST00000440925 EIF4A1P60842 406 aaKnown RBP19.44■□□□□ 0.7
PLOD3-205ENST00000440925 GNAI1P63096 354 aa19.44■□□□□ 0.7
PLOD3-205ENST00000440925 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
PLOD3-205ENST00000440925 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
PLOD3-205ENST00000440925 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
PLOD3-205ENST00000440925 EP400Q96L91 3159 aa19.42■□□□□ 0.7
PLOD3-205ENST00000440925 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
PLOD3-205ENST00000440925 TSPYL4Q9UJ04 414 aa19.42■□□□□ 0.7
PLOD3-205ENST00000440925 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
PLOD3-205ENST00000440925 NHSQ6T4R5 1651 aa19.42■□□□□ 0.7
PLOD3-205ENST00000440925 E9PSI1 815 aa19.41■□□□□ 0.7
PLOD3-205ENST00000440925 CALD1Q05682 793 aaKnown RBP19.41■□□□□ 0.7
PLOD3-205ENST00000440925 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
PLOD3-205ENST00000440925 KCNQ4P56696 695 aa19.4■□□□□ 0.7
PLOD3-205ENST00000440925 KCPQ6ZWJ8 1503 aa19.4■□□□□ 0.7
PLOD3-205ENST00000440925 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
PLOD3-205ENST00000440925 EXOSC9Q06265 439 aaKnown RBP19.39■□□□□ 0.69
PLOD3-205ENST00000440925 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
PLOD3-205ENST00000440925 BTAF1O14981 1849 aa19.38■□□□□ 0.69
PLOD3-205ENST00000440925 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
PLOD3-205ENST00000440925 LRRC4BQ9NT99 713 aa19.38■□□□□ 0.69
PLOD3-205ENST00000440925 PLSCR1O15162 318 aa19.37■□□□□ 0.69
PLOD3-205ENST00000440925 VAMP4O75379 141 aa19.37■□□□□ 0.69
PLOD3-205ENST00000440925 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
PLOD3-205ENST00000440925 APBA3O96018 575 aa19.37■□□□□ 0.69
PLOD3-205ENST00000440925 ITPK1Q13572 414 aa19.37■□□□□ 0.69
PLOD3-205ENST00000440925 UPF1Q92900 1129 aaKnown RBP eCLIP19.37■□□□□ 0.69
PLOD3-205ENST00000440925 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
PLOD3-205ENST00000440925 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
PLOD3-205ENST00000440925 CAMKK2Q96RR4 588 aa19.36■□□□□ 0.69
PLOD3-205ENST00000440925 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
PLOD3-205ENST00000440925 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
PLOD3-205ENST00000440925 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
PLOD3-205ENST00000440925 LOC102724428A0A0B4J2F2 783 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 SIK1P57059 783 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 DEFB132Q7Z7B7 95 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
PLOD3-205ENST00000440925 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
PLOD3-205ENST00000440925 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
PLOD3-205ENST00000440925 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
PLOD3-205ENST00000440925 EZH2Q15910 746 aaKnown RBP19.32■□□□□ 0.68
PLOD3-205ENST00000440925 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
PLOD3-205ENST00000440925 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
PLOD3-205ENST00000440925 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
PLOD3-205ENST00000440925 TXNRD1Q16881 649 aa19.31■□□□□ 0.68
PLOD3-205ENST00000440925 CYP19A1P11511 503 aaPredicted RBP19.3■□□□□ 0.68
PLOD3-205ENST00000440925 ATP6V1AP38606 617 aa19.3■□□□□ 0.68
PLOD3-205ENST00000440925 PDIA6Q15084 440 aa19.3■□□□□ 0.68
PLOD3-205ENST00000440925 LINC00116Q8NCU8 138 aa19.3■□□□□ 0.68
PLOD3-205ENST00000440925 LY75O60449 1722 aa19.29■□□□□ 0.68
PLOD3-205ENST00000440925 NBPF26B4DH59 902 aa19.29■□□□□ 0.68
PLOD3-205ENST00000440925 TWISTNBQ3B726 338 aaPredicted RBP19.29■□□□□ 0.68
PLOD3-205ENST00000440925 NBPF14Q5TI25 921 aa19.29■□□□□ 0.68
PLOD3-205ENST00000440925 NBPF10Q6P3W6 841 aaKnown RBP19.29■□□□□ 0.68
PLOD3-205ENST00000440925 INTS5Q6P9B9 1019 aaKnown RBP19.29■□□□□ 0.68
PLOD3-205ENST00000440925 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
PLOD3-205ENST00000440925 NBPF15Q8N660 670 aa19.29■□□□□ 0.68
PLOD3-205ENST00000440925 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
PLOD3-205ENST00000440925 A1BGP04217 495 aa19.28■□□□□ 0.68
PLOD3-205ENST00000440925 LRP10Q7Z4F1 713 aa19.28■□□□□ 0.68
PLOD3-205ENST00000440925 SMIM5Q71RC9 77 aa19.27■□□□□ 0.68
PLOD3-205ENST00000440925 AMIGO3Q86WK7 504 aa19.27■□□□□ 0.68
PLOD3-205ENST00000440925 NECTIN2Q92692 538 aa19.27■□□□□ 0.68
PLOD3-205ENST00000440925 CCNL1Q9UK58 526 aaPredicted RBP19.27■□□□□ 0.68
PLOD3-205ENST00000440925 TJP1Q07157 1748 aa19.27■□□□□ 0.68
PLOD3-205ENST00000440925 EIF2S2P20042 333 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms