RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
AP004290.1-201ENST00000440915 TEFQ10587 303 aa13.37□□□□□ -0.27
AP004290.1-201ENST00000440915 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
AP004290.1-201ENST00000440915 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
AP004290.1-201ENST00000440915 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
AP004290.1-201ENST00000440915 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
AP004290.1-201ENST00000440915 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
AP004290.1-201ENST00000440915 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
AP004290.1-201ENST00000440915 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
AP004290.1-201ENST00000440915 A0A0G2JS52 829 aa13.35□□□□□ -0.27
AP004290.1-201ENST00000440915 MYT1Q01538 1121 aa13.35□□□□□ -0.27
AP004290.1-201ENST00000440915 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
AP004290.1-201ENST00000440915 MRC1P22897 1456 aa13.35□□□□□ -0.27
AP004290.1-201ENST00000440915 SIPA1L3O60292 1781 aaPredicted RBP13.34□□□□□ -0.27
AP004290.1-201ENST00000440915 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
AP004290.1-201ENST00000440915 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
AP004290.1-201ENST00000440915 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.28
AP004290.1-201ENST00000440915 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
AP004290.1-201ENST00000440915 CABP4P57796 275 aa13.33□□□□□ -0.28
AP004290.1-201ENST00000440915 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
AP004290.1-201ENST00000440915 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
AP004290.1-201ENST00000440915 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
AP004290.1-201ENST00000440915 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
AP004290.1-201ENST00000440915 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
AP004290.1-201ENST00000440915 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
AP004290.1-201ENST00000440915 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
AP004290.1-201ENST00000440915 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
AP004290.1-201ENST00000440915 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 KCNQ3O43525 872 aa13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
AP004290.1-201ENST00000440915 ELL2O00472 640 aaPredicted RBP13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 VAMP4O75379 141 aa13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 RXRBP28702 533 aa13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 EIF4A1P60842 406 aaKnown RBP13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 POTEAQ6S8J7 498 aa13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 SUPT16HQ9Y5B9 1047 aaKnown RBP13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
AP004290.1-201ENST00000440915 ITGB4P16144 1822 aa13.28□□□□□ -0.28
AP004290.1-201ENST00000440915 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
AP004290.1-201ENST00000440915 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
AP004290.1-201ENST00000440915 PIGBQ92521 554 aa13.27□□□□□ -0.29
AP004290.1-201ENST00000440915 ACSBG1Q96GR2 724 aa13.27□□□□□ -0.29
AP004290.1-201ENST00000440915 PAPPAQ13219 1627 aa13.27□□□□□ -0.29
AP004290.1-201ENST00000440915 BCL9O00512 1426 aa13.27□□□□□ -0.29
AP004290.1-201ENST00000440915 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 FAM182BQ5T319 152 aa13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
AP004290.1-201ENST00000440915 BCAR3O75815 825 aa13.25□□□□□ -0.29
AP004290.1-201ENST00000440915 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
AP004290.1-201ENST00000440915 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
AP004290.1-201ENST00000440915 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
AP004290.1-201ENST00000440915 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
AP004290.1-201ENST00000440915 RGS12O14924 1447 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 KCNQ2O43526 872 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
AP004290.1-201ENST00000440915 HOXB7P09629 217 aa13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
AP004290.1-201ENST00000440915 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 C5P01031 1676 aa13.21□□□□□ -0.3
AP004290.1-201ENST00000440915 PLIN1O60240 522 aa13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
AP004290.1-201ENST00000440915 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
AP004290.1-201ENST00000440915 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
AP004290.1-201ENST00000440915 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
AP004290.1-201ENST00000440915 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
AP004290.1-201ENST00000440915 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
AP004290.1-201ENST00000440915 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms