RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 U2AF1Q01081 240 aaKnown RBP eCLIP26.32■■□□□ 1.8
ARPC4-204ENST00000440787 ZNF831Q5JPB2 1677 aa26.31■■□□□ 1.8
ARPC4-204ENST00000440787 PRKAR2BP31323 418 aa26.31■■□□□ 1.8
ARPC4-204ENST00000440787 PNPLA7Q6ZV29 1317 aa26.31■■□□□ 1.8
ARPC4-204ENST00000440787 GAS2L2Q8NHY3 880 aa26.3■■□□□ 1.8
ARPC4-204ENST00000440787 NFATC2IPQ8NCF5 419 aa26.29■■□□□ 1.8
ARPC4-204ENST00000440787 MAP3K5Q99683 1374 aa26.29■■□□□ 1.8
ARPC4-204ENST00000440787 RNMTO43148 476 aaKnown RBP26.28■■□□□ 1.8
ARPC4-204ENST00000440787 MTFR1LQ9H019 292 aa26.28■■□□□ 1.8
ARPC4-204ENST00000440787 LGR6Q9HBX8 967 aa26.28■■□□□ 1.8
ARPC4-204ENST00000440787 FCHSD2O94868 740 aa26.27■■□□□ 1.8
ARPC4-204ENST00000440787 SLC52A2Q9HAB3 445 aa26.27■■□□□ 1.8
ARPC4-204ENST00000440787 UBR3Q6ZT12 1888 aa26.26■■□□□ 1.79
ARPC4-204ENST00000440787 ATP6V1AP38606 617 aa26.26■■□□□ 1.79
ARPC4-204ENST00000440787 PHACTR3Q96KR7 559 aa26.26■■□□□ 1.79
ARPC4-204ENST00000440787 ATF5Q9Y2D1 282 aaPredicted RBP26.26■■□□□ 1.79
ARPC4-204ENST00000440787 ITPK1Q13572 414 aa26.25■■□□□ 1.79
ARPC4-204ENST00000440787 LINC00116Q8NCU8 138 aa26.25■■□□□ 1.79
ARPC4-204ENST00000440787 PPP1R1BQ9UD71 204 aaPredicted RBP26.25■■□□□ 1.79
ARPC4-204ENST00000440787 COL5A3P25940 1745 aaPredicted RBP26.25■■□□□ 1.79
ARPC4-204ENST00000440787 MYBBP1AQ9BQG0 1328 aaKnown RBP26.24■■□□□ 1.79
ARPC4-204ENST00000440787 GNAT3A8MTJ3 354 aa26.24■■□□□ 1.79
ARPC4-204ENST00000440787 PTGER2P43116 358 aa26.24■■□□□ 1.79
ARPC4-204ENST00000440787 SLC16A10Q8TF71 515 aa26.24■■□□□ 1.79
ARPC4-204ENST00000440787 AK7Q96M32 723 aa26.24■■□□□ 1.79
ARPC4-204ENST00000440787 RBM42Q9BTD8 480 aaKnown RBP26.24■■□□□ 1.79
ARPC4-204ENST00000440787 COL24A1Q17RW2 1714 aa26.23■■□□□ 1.79
ARPC4-204ENST00000440787 CICQ96RK0 1608 aaPredicted RBP26.23■■□□□ 1.79
ARPC4-204ENST00000440787 SLC4A9Q96Q91 983 aa26.22■■□□□ 1.79
ARPC4-204ENST00000440787 SIPA1L3O60292 1781 aaPredicted RBP26.21■■□□□ 1.79
ARPC4-204ENST00000440787 TJP1Q07157 1748 aa26.2■■□□□ 1.79
ARPC4-204ENST00000440787 COL23A1Q86Y22 540 aaPredicted RBP26.2■■□□□ 1.78
ARPC4-204ENST00000440787 FLAD1Q8NFF5 587 aa26.2■■□□□ 1.78
ARPC4-204ENST00000440787 SGIP1Q9BQI5 828 aa26.2■■□□□ 1.78
ARPC4-204ENST00000440787 MSH5O43196 834 aa26.19■■□□□ 1.78
ARPC4-204ENST00000440787 PTCD1O75127 700 aaKnown RBP26.19■■□□□ 1.78
ARPC4-204ENST00000440787 IL17REQ8NFR9 667 aa26.18■■□□□ 1.78
ARPC4-204ENST00000440787 UBR2Q8IWV8 1755 aa26.18■■□□□ 1.78
ARPC4-204ENST00000440787 ZNF316A6NFI3 1004 aaPredicted RBP26.17■■□□□ 1.78
ARPC4-204ENST00000440787 PRKRIP1Q9H875 184 aaPredicted RBP26.17■■□□□ 1.78
ARPC4-204ENST00000440787 CEMIPQ8WUJ3 1361 aa26.17■■□□□ 1.78
ARPC4-204ENST00000440787 KCPQ6ZWJ8 1503 aa26.16■■□□□ 1.78
ARPC4-204ENST00000440787 GNPATO15228 680 aa26.16■■□□□ 1.78
ARPC4-204ENST00000440787 TEFQ10587 303 aa26.16■■□□□ 1.78
ARPC4-204ENST00000440787 AMIGO3Q86WK7 504 aa26.16■■□□□ 1.78
ARPC4-204ENST00000440787 NEFMP07197 916 aa26.15■■□□□ 1.78
ARPC4-204ENST00000440787 SSFA2P28290 1259 aa26.15■■□□□ 1.78
ARPC4-204ENST00000440787 SLC39A6Q13433 755 aa26.15■■□□□ 1.78
ARPC4-204ENST00000440787 CNTNAP4Q9C0A0 1308 aa26.14■■□□□ 1.78
ARPC4-204ENST00000440787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.14■■□□□ 1.78
ARPC4-204ENST00000440787 PHF14O94880 888 aa26.14■■□□□ 1.78
ARPC4-204ENST00000440787 DLG5Q8TDM6 1919 aa26.14■■□□□ 1.77
ARPC4-204ENST00000440787 MYH14Q7Z406 1995 aaKnown RBP26.13■■□□□ 1.77
ARPC4-204ENST00000440787 POLD1P28340 1107 aa26.12■■□□□ 1.77
ARPC4-204ENST00000440787 RC3H1Q5TC82 1133 aaKnown RBP26.12■■□□□ 1.77
ARPC4-204ENST00000440787 SMIM5Q71RC9 77 aa26.12■■□□□ 1.77
ARPC4-204ENST00000440787 RTF1Q92541 710 aaKnown RBP26.12■■□□□ 1.77
ARPC4-204ENST00000440787 PLEKHF1Q96S99 279 aa26.12■■□□□ 1.77
ARPC4-204ENST00000440787 PNNQ9H307 717 aaKnown RBP26.12■■□□□ 1.77
ARPC4-204ENST00000440787 ARXQ96QS3 562 aa26.11■■□□□ 1.77
ARPC4-204ENST00000440787 TTC5Q8N0Z6 440 aa26.09■■□□□ 1.77
ARPC4-204ENST00000440787 RTCBQ9Y3I0 505 aaKnown RBP26.09■■□□□ 1.77
ARPC4-204ENST00000440787 MAPK8IP3Q9UPT6 1336 aa26.09■■□□□ 1.77
ARPC4-204ENST00000440787 HTATSF1O43719 755 aaKnown RBP26.08■■□□□ 1.77
ARPC4-204ENST00000440787 MSL1Q68DK7 614 aa26.08■■□□□ 1.77
ARPC4-204ENST00000440787 MCM10Q7L590 875 aa26.08■■□□□ 1.77
ARPC4-204ENST00000440787 CRKLP46109 303 aaKnown RBP26.07■■□□□ 1.76
ARPC4-204ENST00000440787 DNAJC10Q8IXB1 793 aa26.07■■□□□ 1.76
ARPC4-204ENST00000440787 FHDC1Q9C0D6 1143 aaPredicted RBP26.07■■□□□ 1.76
ARPC4-204ENST00000440787 C4AP0C0L4 1744 aa26.07■■□□□ 1.76
ARPC4-204ENST00000440787 NFE2L2Q16236 605 aa26.06■■□□□ 1.76
ARPC4-204ENST00000440787 ZNF790Q6PG37 636 aa26.06■■□□□ 1.76
ARPC4-204ENST00000440787 VSIG10Q8N0Z9 540 aa26.06■■□□□ 1.76
ARPC4-204ENST00000440787 RPS6KA4O75676 772 aa26.05■■□□□ 1.76
ARPC4-204ENST00000440787 ADRA2BP18089 450 aa26.05■■□□□ 1.76
ARPC4-204ENST00000440787 DCTN1Q14203 1278 aa26.05■■□□□ 1.76
ARPC4-204ENST00000440787 TRAPPC3LQ5T215 181 aa26.04■■□□□ 1.76
ARPC4-204ENST00000440787 BTBD11A6QL63 1104 aa26.03■■□□□ 1.76
ARPC4-204ENST00000440787 WDR43Q15061 677 aaKnown RBP eCLIP26.03■■□□□ 1.76
ARPC4-204ENST00000440787 ZNF496Q96IT1 587 aaPredicted RBP26.03■■□□□ 1.76
ARPC4-204ENST00000440787 SYT17Q9BSW7 474 aa26.02■■□□□ 1.76
ARPC4-204ENST00000440787 CCDC87Q9NVE4 849 aa26.02■■□□□ 1.76
ARPC4-204ENST00000440787 HEG1Q9ULI3 1381 aa26.02■■□□□ 1.76
ARPC4-204ENST00000440787 CYP19A1P11511 503 aaPredicted RBP26.01■■□□□ 1.75
ARPC4-204ENST00000440787 INTS5Q6P9B9 1019 aaKnown RBP26.01■■□□□ 1.75
ARPC4-204ENST00000440787 ARHGEF1Q92888 912 aaKnown RBP26.01■■□□□ 1.75
ARPC4-204ENST00000440787 FMNL2Q96PY5 1086 aa26■■□□□ 1.75
ARPC4-204ENST00000440787 KLHL34Q8N239 644 aa25.99■■□□□ 1.75
ARPC4-204ENST00000440787 KCNQ3O43525 872 aa25.98■■□□□ 1.75
ARPC4-204ENST00000440787 RFC4P35249 363 aa25.98■■□□□ 1.75
ARPC4-204ENST00000440787 KDM3BQ7LBC6 1761 aa25.97■■□□□ 1.75
ARPC4-204ENST00000440787 SOS1Q07889 1333 aaPredicted RBP25.96■■□□□ 1.75
ARPC4-204ENST00000440787 STARD3NLO95772 234 aa25.96■■□□□ 1.75
ARPC4-204ENST00000440787 TAF7Q15545 349 aaPredicted RBP25.96■■□□□ 1.75
ARPC4-204ENST00000440787 CCDC146Q8IYE0 955 aa25.96■■□□□ 1.75
ARPC4-204ENST00000440787 TEX13AQ9BXU3 409 aaPredicted RBP25.96■■□□□ 1.75
ARPC4-204ENST00000440787 ZBTB1Q9Y2K1 713 aa25.96■■□□□ 1.75
ARPC4-204ENST00000440787 ADAMTS8Q9UP79 889 aa25.95■■□□□ 1.74
ARPC4-204ENST00000440787 TMPOP42166 694 aaKnown RBP25.94■■□□□ 1.74
ARPC4-204ENST00000440787 RUNDC1Q96C34 613 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms