RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IL2RAP01589 272 aa6.37□□□□□ -1.39
HMGB3P11-201ENST00000440127 MAP3K10Q02779 954 aa6.37□□□□□ -1.39
HMGB3P11-201ENST00000440127 KCTD17Q8N5Z5 321 aa6.37□□□□□ -1.39
HMGB3P11-201ENST00000440127 SKIP12755 728 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 GDF10P55107 478 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 PSME1Q06323 249 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 EFHC2Q5JST6 749 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 C1orf216Q8TAB5 229 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 ZNF837Q96EG3 531 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 NUCKS1Q9H1E3 243 aaKnown RBP6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 ENAMQ9NRM1 1142 aa6.36□□□□□ -1.39
HMGB3P11-201ENST00000440127 INHAP05111 366 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 NBPF1Q3BBV0 1214 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 TBC1D9Q6ZT07 1266 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 PPARGC1BQ86YN6 1023 aaKnown RBP6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 SVOPQ8N4V2 548 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 ALG2Q9H553 416 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 MBIPQ9NS73 344 aa6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
HMGB3P11-201ENST00000440127 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
HMGB3P11-201ENST00000440127 KCNMA1Q12791 1236 aa6.34□□□□□ -1.39
HMGB3P11-201ENST00000440127 NIFKQ9BYG3 293 aaKnown RBP6.34□□□□□ -1.39
HMGB3P11-201ENST00000440127 FHDC1Q9C0D6 1143 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P11-201ENST00000440127 HRH3Q9Y5N1 445 aa6.34□□□□□ -1.39
HMGB3P11-201ENST00000440127 USP17L5A8MUK1 530 aa6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 GTF2IP78347 998 aa6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 TMEM151AQ8N4L1 468 aa6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 GPR161Q8N6U8 529 aaKnown RBP6.33□□□□□ -1.4
HMGB3P11-201ENST00000440127 ADAMTS2O95450 1211 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 TATP17735 454 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 MAP2K3P46734 347 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 SMTNP53814 917 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 C4orf17Q53FE4 359 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 PLEKHM2Q8IWE5 1019 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 GTPBP3Q969Y2 492 aaKnown RBP6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 POM121Q96HA1 1249 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 CFHR5Q9BXR6 569 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 TIMELESSQ9UNS1 1208 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 CHMP3Q9Y3E7 222 aa6.32□□□□□ -1.4
HMGB3P11-201ENST00000440127 GDF11O95390 407 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 MX2P20592 715 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 PHKA2P46019 1235 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 PLA2G4AP47712 749 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 SCNN1DP51172 638 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 KRT76Q01546 638 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 NCOA4Q13772 614 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 LRRC4BQ9NT99 713 aa6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 CUEDC1Q9NWM3 386 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P11-201ENST00000440127 CDK2AP1O14519 115 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 ATP9BO43861 1147 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 MARSP56192 900 aaKnown RBP6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 DBN1Q16643 649 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 TSGA10IPQ3SY00 556 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 SLC4A9Q96Q91 983 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 ZDHHC3Q9NYG2 299 aa6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P11-201ENST00000440127 USP17L3A6NCW0 530 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 USP17L4A6NCW7 530 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 A6NJR5 290 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 A6NJY4 79 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 PIK3CDO00329 1044 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 MSX1P28360 303 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 RASSF7Q02833 373 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 HDGFL1Q5TGJ6 251 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 USP17L1Q7RTZ2 530 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 PODNQ7Z5L7 613 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 NLRP8Q86W28 1048 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 SCARF2Q96GP6 870 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 IGF1RP08069 1367 aa6.29□□□□□ -1.4
HMGB3P11-201ENST00000440127 GAS6Q14393 721 aa6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 MTFR1Q15390 333 aa6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 SERTAD1Q9UHV2 236 aa6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 GDF2Q9UK05 429 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 ADAMTS8Q9UP79 889 aa6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 PCDHGA11Q9Y5H2 935 aa6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P11-201ENST00000440127 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 GPR25O00155 361 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 GSK3AP49840 483 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 ARSJQ5FYB0 599 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 ZNF385CQ66K41 422 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 LARGE2Q8N3Y3 721 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 GLMNQ92990 594 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 AIDAQ96BJ3 306 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 RUBCNLQ9H714 662 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 CABP1Q9NZU7 370 aa6.27□□□□□ -1.41
HMGB3P11-201ENST00000440127 POM121CA8CG34 1229 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 PHF20L1A8MW92 1017 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 TMEM229AB2RXF0 380 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 M0R2N6 131 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms