RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 NFATC2IPQ8NCF5 419 aa30.16■■■□□ 2.42
LONRF3-204ENST00000439603 RCAN3Q9UKA8 241 aa30.16■■■□□ 2.42
LONRF3-204ENST00000439603 MARCH10Q8NA82 808 aaPredicted RBP30.16■■■□□ 2.42
LONRF3-204ENST00000439603 MRC1P22897 1456 aa30.15■■■□□ 2.42
LONRF3-204ENST00000439603 CT47B1P0C2W7 299 aaPredicted RBP30.14■■■□□ 2.42
LONRF3-204ENST00000439603 SIPA1L3O60292 1781 aaPredicted RBP30.14■■■□□ 2.42
LONRF3-204ENST00000439603 SEPT12Q8IYM1 358 aa30.11■■■□□ 2.41
LONRF3-204ENST00000439603 C8orf58Q8NAV2 365 aa30.11■■■□□ 2.41
LONRF3-204ENST00000439603 RBM6P78332 1123 aaKnown RBP30.1■■■□□ 2.41
LONRF3-204ENST00000439603 SUPT16HQ9Y5B9 1047 aaKnown RBP30.1■■■□□ 2.41
LONRF3-204ENST00000439603 TSPYL6Q8N831 410 aa30.1■■■□□ 2.41
LONRF3-204ENST00000439603 TOGARAM1Q9Y4F4 1720 aa30.09■■■□□ 2.41
LONRF3-204ENST00000439603 KDM3BQ7LBC6 1761 aa30.08■■■□□ 2.41
LONRF3-204ENST00000439603 ELL2O00472 640 aaPredicted RBP30.08■■■□□ 2.41
LONRF3-204ENST00000439603 KCNQ3O43525 872 aa30.08■■■□□ 2.41
LONRF3-204ENST00000439603 KRT24Q2M2I5 525 aa30.08■■■□□ 2.41
LONRF3-204ENST00000439603 TWISTNBQ3B726 338 aaPredicted RBP30.08■■■□□ 2.41
LONRF3-204ENST00000439603 VAMP4O75379 141 aa30.07■■■□□ 2.4
LONRF3-204ENST00000439603 RGS17Q9UGC6 210 aaPredicted RBP30.07■■■□□ 2.4
LONRF3-204ENST00000439603 TMOD3Q9NYL9 352 aa30.06■■■□□ 2.4
LONRF3-204ENST00000439603 EIF4A1P60842 406 aaKnown RBP30.06■■■□□ 2.4
LONRF3-204ENST00000439603 ZNF790Q6PG37 636 aa30.06■■■□□ 2.4
LONRF3-204ENST00000439603 SLC39A6Q13433 755 aa30.05■■■□□ 2.4
LONRF3-204ENST00000439603 ILDR1Q86SU0 546 aaPredicted RBP30.05■■■□□ 2.4
LONRF3-204ENST00000439603 RARSP54136 660 aaKnown RBP30.04■■■□□ 2.4
LONRF3-204ENST00000439603 ZNF428Q96B54 188 aa30.03■■■□□ 2.4
LONRF3-204ENST00000439603 RXRBP28702 533 aa30.02■■■□□ 2.4
LONRF3-204ENST00000439603 PIGBQ92521 554 aa30.02■■■□□ 2.4
LONRF3-204ENST00000439603 PRIM1P49642 420 aaKnown RBP30.02■■■□□ 2.4
LONRF3-204ENST00000439603 TTC5Q8N0Z6 440 aa30.02■■■□□ 2.4
LONRF3-204ENST00000439603 SYTL4Q96C24 671 aaPredicted RBP30.01■■■□□ 2.39
LONRF3-204ENST00000439603 ITGB4P16144 1822 aa30■■■□□ 2.39
LONRF3-204ENST00000439603 DOT1LQ8TEK3 1739 aa30■■■□□ 2.39
LONRF3-204ENST00000439603 BCL9O00512 1426 aa30■■■□□ 2.39
LONRF3-204ENST00000439603 ACSBG1Q96GR2 724 aa29.99■■■□□ 2.39
LONRF3-204ENST00000439603 SOS1Q07889 1333 aaPredicted RBP29.99■■■□□ 2.39
LONRF3-204ENST00000439603 BCAR3O75815 825 aa29.99■■■□□ 2.39
LONRF3-204ENST00000439603 RNF123Q5XPI4 1314 aa29.98■■■□□ 2.39
LONRF3-204ENST00000439603 ALDH1L2Q3SY69 923 aa29.97■■■□□ 2.39
LONRF3-204ENST00000439603 POTEAQ6S8J7 498 aa29.97■■■□□ 2.39
LONRF3-204ENST00000439603 HEG1Q9ULI3 1381 aa29.97■■■□□ 2.39
LONRF3-204ENST00000439603 KAT6BQ8WYB5 2073 aa29.97■■■□□ 2.39
LONRF3-204ENST00000439603 SSH1Q8WYL5 1049 aa29.96■■■□□ 2.39
LONRF3-204ENST00000439603 FAM182BQ5T319 152 aa29.95■■■□□ 2.39
LONRF3-204ENST00000439603 ZNF496Q96IT1 587 aaPredicted RBP29.95■■■□□ 2.39
LONRF3-204ENST00000439603 BCL2L13Q9BXK5 485 aa29.95■■■□□ 2.39
LONRF3-204ENST00000439603 HOXB7P09629 217 aa29.95■■■□□ 2.38
LONRF3-204ENST00000439603 KRT27Q7Z3Y8 459 aa29.95■■■□□ 2.38
LONRF3-204ENST00000439603 FMNL2Q96PY5 1086 aa29.95■■■□□ 2.38
LONRF3-204ENST00000439603 GIGYF1O75420 1035 aaPredicted RBP29.94■■■□□ 2.38
LONRF3-204ENST00000439603 RRP1P56182 461 aaKnown RBP29.94■■■□□ 2.38
LONRF3-204ENST00000439603 SMC4Q9NTJ3 1288 aa29.94■■■□□ 2.38
LONRF3-204ENST00000439603 PAPPAQ13219 1627 aa29.94■■■□□ 2.38
LONRF3-204ENST00000439603 ASAP1Q9ULH1 1129 aa29.93■■■□□ 2.38
LONRF3-204ENST00000439603 ATG3Q9NT62 314 aa29.93■■■□□ 2.38
LONRF3-204ENST00000439603 KCNQ2O43526 872 aa29.92■■■□□ 2.38
LONRF3-204ENST00000439603 BRWD3Q6RI45 1802 aa29.91■■■□□ 2.38
LONRF3-204ENST00000439603 TCERG1O14776 1098 aaKnown RBP29.9■■■□□ 2.38
LONRF3-204ENST00000439603 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.89■■■□□ 2.38
LONRF3-204ENST00000439603 UBR2Q8IWV8 1755 aa29.89■■■□□ 2.38
LONRF3-204ENST00000439603 KCPQ6ZWJ8 1503 aa29.89■■■□□ 2.38
LONRF3-204ENST00000439603 SNRPA1P09661 255 aaKnown RBP29.89■■■□□ 2.37
LONRF3-204ENST00000439603 CCDC30Q5VVM6 783 aa29.89■■■□□ 2.37
LONRF3-204ENST00000439603 CHMP4AQ9BY43 222 aa29.89■■■□□ 2.37
LONRF3-204ENST00000439603 PRAMEF22A3QJZ6 481 aa29.88■■■□□ 2.37
LONRF3-204ENST00000439603 PLIN1O60240 522 aa29.88■■■□□ 2.37
LONRF3-204ENST00000439603 PTCD1O75127 700 aaKnown RBP29.88■■■□□ 2.37
LONRF3-204ENST00000439603 BRPF1P55201 1214 aaPredicted RBP29.88■■■□□ 2.37
LONRF3-204ENST00000439603 HDGFL1Q5TGJ6 251 aa29.88■■■□□ 2.37
LONRF3-204ENST00000439603 MRPL50Q8N5N7 158 aaKnown RBP29.88■■■□□ 2.37
LONRF3-204ENST00000439603 EIF2S2P20042 333 aaKnown RBP29.87■■■□□ 2.37
LONRF3-204ENST00000439603 RGS12O14924 1447 aa29.86■■■□□ 2.37
LONRF3-204ENST00000439603 FAM196AQ6ZSG2 479 aa29.86■■■□□ 2.37
LONRF3-204ENST00000439603 NECTIN2Q92692 538 aa29.86■■■□□ 2.37
LONRF3-204ENST00000439603 FRAT1Q92837 279 aaPredicted RBP29.86■■■□□ 2.37
LONRF3-204ENST00000439603 NEFLP07196 543 aa29.85■■■□□ 2.37
LONRF3-204ENST00000439603 STK31Q9BXU1 1019 aa29.85■■■□□ 2.37
LONRF3-204ENST00000439603 CANXP27824 592 aaKnown RBP29.83■■■□□ 2.37
LONRF3-204ENST00000439603 KIF16BQ96L93 1317 aa29.83■■■□□ 2.37
LONRF3-204ENST00000439603 SLC4A2P04920 1241 aa29.82■■■□□ 2.37
LONRF3-204ENST00000439603 NHSQ6T4R5 1651 aa29.82■■■□□ 2.37
LONRF3-204ENST00000439603 VSIG10Q8N0Z9 540 aa29.82■■■□□ 2.37
LONRF3-204ENST00000439603 RBM42Q9BTD8 480 aaKnown RBP29.82■■■□□ 2.37
LONRF3-204ENST00000439603 NOB1Q9ULX3 412 aaKnown RBP29.82■■■□□ 2.37
LONRF3-204ENST00000439603 PTF1AQ7RTS3 328 aa29.82■■■□□ 2.36
LONRF3-204ENST00000439603 USP16Q9Y5T5 823 aa29.82■■■□□ 2.36
LONRF3-204ENST00000439603 SMARCC1Q92922 1105 aaPredicted RBP29.81■■■□□ 2.36
LONRF3-204ENST00000439603 C5P01031 1676 aa29.81■■■□□ 2.36
LONRF3-204ENST00000439603 SBF2Q86WG5 1849 aa29.8■■■□□ 2.36
LONRF3-204ENST00000439603 IRX6P78412 446 aaPredicted RBP29.8■■■□□ 2.36
LONRF3-204ENST00000439603 ZKSCAN2Q63HK3 967 aa29.8■■■□□ 2.36
LONRF3-204ENST00000439603 IPO8O15397 1037 aaKnown RBP29.79■■■□□ 2.36
LONRF3-204ENST00000439603 PALLDQ8WX93 1383 aa29.78■■■□□ 2.36
LONRF3-204ENST00000439603 BCL11BQ9C0K0 894 aaPredicted RBP29.78■■■□□ 2.36
LONRF3-204ENST00000439603 CHPF2Q9P2E5 772 aa29.78■■■□□ 2.36
LONRF3-204ENST00000439603 DBF4Q9UBU7 674 aaPredicted RBP29.77■■■□□ 2.36
LONRF3-204ENST00000439603 SLC4A9Q96Q91 983 aa29.76■■■□□ 2.36
LONRF3-204ENST00000439603 TEX13AQ9BXU3 409 aaPredicted RBP29.76■■■□□ 2.36
LONRF3-204ENST00000439603 ARHGAP45Q92619 1136 aa29.76■■■□□ 2.35
LONRF3-204ENST00000439603 ATF7IPQ6VMQ6 1270 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms