RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PHF14O94880 888 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 NPATQ14207 1427 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
ACTN1-204ENST00000438964 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-204ENST00000438964 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
ACTN1-204ENST00000438964 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-204ENST00000438964 UTP14CQ5TAP6 766 aaKnown RBP16.12■□□□□ 0.17
ACTN1-204ENST00000438964 DRC7Q8IY82 874 aa16.12■□□□□ 0.17
ACTN1-204ENST00000438964 ZCCHC11Q5TAX3 1644 aaKnown RBP16.12■□□□□ 0.17
ACTN1-204ENST00000438964 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 NRXN1Q9ULB1 1477 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 VPS37CA5D8V6 355 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-204ENST00000438964 LARGE1O95461 756 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 CHMLP26374 656 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 IDI1Q13907 227 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 GLI2P10070 1586 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 FANCAO15360 1455 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 MX1P20591 662 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 MCCP23508 829 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 CHAF1AQ13111 956 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-204ENST00000438964 CUL4AQ13619 759 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
ACTN1-204ENST00000438964 FGD1P98174 961 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
ACTN1-204ENST00000438964 FOXO3O43524 673 aa16.1■□□□□ 0.17
ACTN1-204ENST00000438964 SYT1P21579 422 aa16.1■□□□□ 0.17
ACTN1-204ENST00000438964 IL13P35225 146 aa16.1■□□□□ 0.17
ACTN1-204ENST00000438964 WDR33Q9C0J8 1336 aaKnown RBP16.1■□□□□ 0.17
ACTN1-204ENST00000438964 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
ACTN1-204ENST00000438964 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-204ENST00000438964 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
ACTN1-204ENST00000438964 IFT172Q9UG01 1749 aa16.08■□□□□ 0.17
ACTN1-204ENST00000438964 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.17
ACTN1-204ENST00000438964 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.17
ACTN1-204ENST00000438964 AK2P54819 239 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 CCDC186Q7Z3E2 898 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-204ENST00000438964 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 GTF2F1P35269 517 aaKnown RBP eCLIP16.08■□□□□ 0.16
ACTN1-204ENST00000438964 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
ACTN1-204ENST00000438964 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 STX6O43752 255 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 NCBP1Q09161 790 aaKnown RBP16.07■□□□□ 0.16
ACTN1-204ENST00000438964 TCEANC2Q96MN5 208 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
ACTN1-204ENST00000438964 ZSCAN22P10073 491 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-204ENST00000438964 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-204ENST00000438964 A0A087WWV3 80 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 CWC27Q6UX04 472 aaKnown RBP16.06■□□□□ 0.16
ACTN1-204ENST00000438964 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 GTPBP4Q9BZE4 634 aaKnown RBP16.06■□□□□ 0.16
ACTN1-204ENST00000438964 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 USP32Q8NFA0 1604 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 SYTL4Q96C24 671 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-204ENST00000438964 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 RGS12O14924 1447 aa16.06■□□□□ 0.16
ACTN1-204ENST00000438964 HMMRO75330 724 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-204ENST00000438964 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
ACTN1-204ENST00000438964 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
ACTN1-204ENST00000438964 UBE2HP62256 183 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 DIAPH3Q9NSV4 1193 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
ACTN1-204ENST00000438964 F13A1P00488 732 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 CASTP20810 708 aaKnown RBP16.04■□□□□ 0.16
ACTN1-204ENST00000438964 GJB2P29033 226 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
ACTN1-204ENST00000438964 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
ACTN1-204ENST00000438964 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
ACTN1-204ENST00000438964 LIG1P18858 919 aa16.03■□□□□ 0.16
ACTN1-204ENST00000438964 MCM2P49736 904 aa16.03■□□□□ 0.16
ACTN1-204ENST00000438964 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
ACTN1-204ENST00000438964 LETM1O95202 739 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-204ENST00000438964 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
ACTN1-204ENST00000438964 RAPGEF3O95398 923 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 TNNT1P13805 278 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 TRIM5Q9C035 493 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 SNX14Q9Y5W7 946 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 ABCC3O15438 1527 aa16.02■□□□□ 0.16
ACTN1-204ENST00000438964 PPLO60437 1756 aa16.02■□□□□ 0.15
ACTN1-204ENST00000438964 GNAI2P04899 355 aa16.02■□□□□ 0.15
ACTN1-204ENST00000438964 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.15
ACTN1-204ENST00000438964 ANKRD7Q92527 254 aa16.02■□□□□ 0.15
ACTN1-204ENST00000438964 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms