RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SFI1A8K8P3 1242 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 MEN1O00255 615 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 GPC1P35052 558 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 SCNN1DP51172 638 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 SMTNP53814 917 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 KDF1Q8NAX2 398 aaPredicted RBP7□□□□□ -1.29
LSM1P1-201ENST00000438629 GAS2L2Q8NHY3 880 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
LSM1P1-201ENST00000438629 AGBL1Q96MI9 1066 aa7□□□□□ -1.29
LSM1P1-201ENST00000438629 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 SPINT1O43278 529 aa6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 STK32AQ8WU08 396 aa6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 SERTAD1Q9UHV2 236 aa6.99□□□□□ -1.29
LSM1P1-201ENST00000438629 A6NJY4 79 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 CDK2AP1O14519 115 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 IL2RAP01589 272 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 BMP2P12643 396 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 CENPCQ03188 943 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 FAM69CQ0P6D2 419 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 NBPF15Q8N660 670 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 RAB6BQ9NRW1 208 aa6.98□□□□□ -1.29
LSM1P1-201ENST00000438629 BRD1O95696 1058 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 MTFR1Q15390 333 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 TLR1Q15399 786 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 KCTD17Q8N5Z5 321 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 TSEN2Q8NCE0 465 aaKnown RBP6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 ZSCAN10Q96SZ4 725 aaPredicted RBP6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 CHMP3Q9Y3E7 222 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
LSM1P1-201ENST00000438629 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.3
LSM1P1-201ENST00000438629 TNS4Q8IZW8 715 aa6.96□□□□□ -1.3
LSM1P1-201ENST00000438629 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.3
LSM1P1-201ENST00000438629 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
LSM1P1-201ENST00000438629 IGFBP4P22692 258 aa6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 C6orf118Q5T5N4 469 aa6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 TMEM214Q6NUQ4 689 aaKnown RBP6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 PPARGC1BQ86YN6 1023 aaKnown RBP6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
LSM1P1-201ENST00000438629 STAU1O95793 577 aaKnown RBP6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 ATP2B4P23634 1241 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 WEE1P30291 646 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 EPHA4P54764 986 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 GNASQ5JWF2 1037 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 STAG2Q8N3U4 1231 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 AAASQ9NRG9 546 aa6.94□□□□□ -1.3
LSM1P1-201ENST00000438629 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 FOXO3O43524 673 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 SSFA2P28290 1259 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 FOXK2Q01167 660 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 SCG3Q8WXD2 468 aaKnown RBP6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 PURBQ96QR8 312 aaKnown RBP6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 SENP2Q9HC62 589 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
LSM1P1-201ENST00000438629 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 PPP1R12BO60237 982 aaPredicted RBP6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 PRMT3O60678 531 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 PSMA6P60900 246 aaKnown RBP6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 KCNA1Q09470 495 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 LYSMD3Q7Z3D4 306 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 TRIM46Q7Z4K8 759 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 SLC9A9Q8IVB4 645 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 RHBDD1Q8TEB9 315 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 KIFC2Q96AC6 838 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 VTI1AQ96AJ9 217 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 PRIMPOLQ96LW4 560 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 ZFP42Q96MM3 310 aa6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 CXXC1Q9P0U4 656 aaPredicted RBP6.92□□□□□ -1.3
LSM1P1-201ENST00000438629 PTCD1O75127 700 aaKnown RBP6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 BMP1P13497 986 aa6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 TEAD4Q15561 434 aa6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 Q6ZNB5 142 aa6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 CABP1Q9NZU7 370 aa6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 SOS2Q07890 1332 aaPredicted RBP6.91□□□□□ -1.3
LSM1P1-201ENST00000438629 ZBTB7CA1YPR0 619 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 OCLNQ16625 522 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 RNF217Q8TC41 542 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 CCER1Q8TC90 406 aaPredicted RBP6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
LSM1P1-201ENST00000438629 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms