RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
R3HDM1-208ENST00000438014 ASTLQ6HA08 431 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-208ENST00000438014 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
R3HDM1-208ENST00000438014 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
R3HDM1-208ENST00000438014 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
R3HDM1-208ENST00000438014 ITSN1Q15811 1721 aa12.08□□□□□ -0.48
R3HDM1-208ENST00000438014 KIF3CO14782 793 aa12.07□□□□□ -0.48
R3HDM1-208ENST00000438014 EVX2Q03828 476 aa12.07□□□□□ -0.48
R3HDM1-208ENST00000438014 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
R3HDM1-208ENST00000438014 PLCG2P16885 1265 aa12.06□□□□□ -0.48
R3HDM1-208ENST00000438014 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
R3HDM1-208ENST00000438014 LRRC37A3O60309 1634 aa12.06□□□□□ -0.48
R3HDM1-208ENST00000438014 UTRNP46939 3433 aa12.06□□□□□ -0.48
R3HDM1-208ENST00000438014 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
R3HDM1-208ENST00000438014 MAP3K9P80192 1104 aa12.05□□□□□ -0.48
R3HDM1-208ENST00000438014 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
R3HDM1-208ENST00000438014 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
R3HDM1-208ENST00000438014 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
R3HDM1-208ENST00000438014 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
R3HDM1-208ENST00000438014 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
R3HDM1-208ENST00000438014 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
R3HDM1-208ENST00000438014 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
R3HDM1-208ENST00000438014 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-208ENST00000438014 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
R3HDM1-208ENST00000438014 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
R3HDM1-208ENST00000438014 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-208ENST00000438014 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
R3HDM1-208ENST00000438014 USP6P35125 1406 aa12.03□□□□□ -0.48
R3HDM1-208ENST00000438014 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
R3HDM1-208ENST00000438014 PPIP5K1Q6PFW1 1433 aa12.02□□□□□ -0.49
R3HDM1-208ENST00000438014 CEP350Q5VT06 3117 aa12.01□□□□□ -0.49
R3HDM1-208ENST00000438014 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
R3HDM1-208ENST00000438014 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
R3HDM1-208ENST00000438014 TRIM66O15016 1216 aa12□□□□□ -0.49
R3HDM1-208ENST00000438014 APLP1P51693 650 aa12□□□□□ -0.49
R3HDM1-208ENST00000438014 PNPLA7Q6ZV29 1317 aa12□□□□□ -0.49
R3HDM1-208ENST00000438014 IL2RBP14784 551 aa11.99□□□□□ -0.49
R3HDM1-208ENST00000438014 ZNF526Q8TF50 670 aaPredicted RBP11.99□□□□□ -0.49
R3HDM1-208ENST00000438014 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
R3HDM1-208ENST00000438014 TNS2Q63HR2 1409 aa11.99□□□□□ -0.49
R3HDM1-208ENST00000438014 SLIT3O75094 1523 aa11.99□□□□□ -0.49
R3HDM1-208ENST00000438014 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
R3HDM1-208ENST00000438014 GPR37O15354 613 aa11.98□□□□□ -0.49
R3HDM1-208ENST00000438014 CD2APQ9Y5K6 639 aa11.98□□□□□ -0.49
R3HDM1-208ENST00000438014 PDE4DQ08499 809 aa11.97□□□□□ -0.49
R3HDM1-208ENST00000438014 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
R3HDM1-208ENST00000438014 NLRP2Q9NX02 1062 aa11.97□□□□□ -0.49
R3HDM1-208ENST00000438014 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
R3HDM1-208ENST00000438014 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
R3HDM1-208ENST00000438014 HMGB2P26583 209 aaKnown RBP11.96□□□□□ -0.49
R3HDM1-208ENST00000438014 COL18A1P39060 1754 aa11.95□□□□□ -0.5
R3HDM1-208ENST00000438014 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
R3HDM1-208ENST00000438014 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
R3HDM1-208ENST00000438014 SEC24BO95487 1268 aa11.95□□□□□ -0.5
R3HDM1-208ENST00000438014 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
R3HDM1-208ENST00000438014 ADCY9O60503 1353 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
R3HDM1-208ENST00000438014 TBC1D12O60347 775 aa11.93□□□□□ -0.5
R3HDM1-208ENST00000438014 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
R3HDM1-208ENST00000438014 ABCC6O95255 1503 aa11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 TOMM70O94826 608 aa11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 OSBPP22059 807 aa11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 FLAD1Q8NFF5 587 aa11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
R3HDM1-208ENST00000438014 ERBB3P21860 1342 aa11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 KCNQ4P56696 695 aa11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
R3HDM1-208ENST00000438014 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 GABBR2O75899 941 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 PRELPP51888 382 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 COL24A1Q17RW2 1714 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 COL13A1Q5TAT6 717 aaPredicted RBP11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 DDX12PQ92771 950 aa11.9□□□□□ -0.5
R3HDM1-208ENST00000438014 BTAF1O14981 1849 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 ANKRD24Q8TF21 1146 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
R3HDM1-208ENST00000438014 GNPATO15228 680 aa11.88□□□□□ -0.51
R3HDM1-208ENST00000438014 FCHSD2O94868 740 aa11.88□□□□□ -0.51
R3HDM1-208ENST00000438014 IRF6O14896 467 aa11.87□□□□□ -0.51
R3HDM1-208ENST00000438014 EVI5O60447 810 aa11.87□□□□□ -0.51
R3HDM1-208ENST00000438014 HIC1Q14526 733 aa11.87□□□□□ -0.51
R3HDM1-208ENST00000438014 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
R3HDM1-208ENST00000438014 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
R3HDM1-208ENST00000438014 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms