RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 USHBP1Q8N6Y0 703 aa17.7■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 KCNA3P22001 575 aa17.69■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 HOXC9P31274 260 aa17.68■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 VASPP50552 380 aaPredicted RBP17.68■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 GNPATO15228 680 aa17.67■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 HMGB2P26583 209 aaKnown RBP17.67■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 BRCA1P38398 1863 aaKnown RBP17.66■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 FOXN1O15353 648 aa17.65■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 ITPK1Q13572 414 aa17.65■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 PIGBQ92521 554 aa17.65■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
SMAD9-IT1-201ENST00000437983 LOC102724428A0A0B4J2F2 783 aa17.64■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 SIK1P57059 783 aa17.64■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 MAP2P11137 1827 aaKnown RBP17.63■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 CYP27B1O15528 508 aa17.63■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 AMPHP49418 695 aa17.63■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 DCAF5Q96JK2 942 aa17.63■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 CCDC87Q9NVE4 849 aa17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 MKRN1Q9UHC7 482 aaKnown RBP17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 ITGB4P16144 1822 aa17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 ARFGEF1Q9Y6D6 1849 aa17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 TATP17735 454 aaPredicted RBP17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 TMF1P82094 1093 aa17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 SBF1O95248 1867 aa17.59■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 PRDM10Q9NQV6 1147 aa17.59■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 C4AP0C0L4 1744 aa17.58■□□□□ 0.41
SMAD9-IT1-201ENST00000437983 A0A1W2PP64 1363 aa17.58■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 RASSF7Q02833 373 aa17.58■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ASAP1Q9ULH1 1129 aa17.58■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 GYS1P13807 737 aa17.57■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 CHRNA5P30532 468 aa17.57■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 TRAPPC3LQ5T215 181 aa17.57■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 POTECB2RU33 542 aa17.56■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ARHGEF1Q92888 912 aaKnown RBP17.56■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 GLTPD2A6NH11 291 aa17.55■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ABHD8Q96I13 439 aa17.55■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 COG3Q96JB2 828 aa17.54■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 L3MBTL2Q969R5 705 aa17.53■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 LBX1P52954 281 aa17.52■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
SMAD9-IT1-201ENST00000437983 KDM6AO15550 1401 aaPredicted RBP17.51■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 RFC4P35249 363 aa17.5■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 MLLT1Q03111 559 aaPredicted RBP17.5■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 ABCB7O75027 752 aa17.49■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 DDR1Q08345 913 aa17.49■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 AIDAQ96BJ3 306 aa17.49■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 LMNB1P20700 586 aa17.48■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 VEGFBP49765 207 aa17.47■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 KDRP35968 1356 aa17.46■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 WBP1LQ9NX94 342 aa17.46■□□□□ 0.39
SMAD9-IT1-201ENST00000437983 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 RGS19P49795 217 aa17.44■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms