RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 COL14A1Q05707 1796 aaKnown RBP24.9■■□□□ 1.58
CHRNA7-202ENST00000437966 ARHGAP45Q92619 1136 aa24.9■■□□□ 1.58
CHRNA7-202ENST00000437966 VIRMAQ69YN4 1812 aaKnown RBP24.9■■□□□ 1.58
CHRNA7-202ENST00000437966 G2E3Q7L622 706 aa24.89■■□□□ 1.57
CHRNA7-202ENST00000437966 NFATC2IPQ8NCF5 419 aa24.89■■□□□ 1.57
CHRNA7-202ENST00000437966 DDX54Q8TDD1 881 aaKnown RBP24.88■■□□□ 1.57
CHRNA7-202ENST00000437966 SLC52A2Q9HAB3 445 aa24.88■■□□□ 1.57
CHRNA7-202ENST00000437966 PKD1L3Q7Z443 1732 aa24.87■■□□□ 1.57
CHRNA7-202ENST00000437966 SLC39A6Q13433 755 aa24.87■■□□□ 1.57
CHRNA7-202ENST00000437966 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
CHRNA7-202ENST00000437966 PCDHB15Q9Y5E8 787 aa24.87■■□□□ 1.57
CHRNA7-202ENST00000437966 IGHDP01880 384 aa24.86■■□□□ 1.57
CHRNA7-202ENST00000437966 EIF2S2P20042 333 aaKnown RBP24.86■■□□□ 1.57
CHRNA7-202ENST00000437966 KDM3BQ7LBC6 1761 aa24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 SKAP1Q86WV1 359 aa24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 API5Q9BZZ5 524 aaKnown RBP24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 ADAMTS7Q9UKP4 1686 aa24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 KDM2BQ8NHM5 1336 aa24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 CCDC30Q5VVM6 783 aa24.85■■□□□ 1.57
CHRNA7-202ENST00000437966 PARP4Q9UKK3 1724 aaKnown RBP24.84■■□□□ 1.57
CHRNA7-202ENST00000437966 STK31Q9BXU1 1019 aa24.84■■□□□ 1.57
CHRNA7-202ENST00000437966 DDX19BQ9UMR2 479 aa24.84■■□□□ 1.57
CHRNA7-202ENST00000437966 PCDH11XQ9BZA7 1347 aa24.84■■□□□ 1.57
CHRNA7-202ENST00000437966 PCDH11YQ9BZA8 1340 aa24.84■■□□□ 1.57
CHRNA7-202ENST00000437966 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.57
CHRNA7-202ENST00000437966 HDGFL1Q5TGJ6 251 aa24.83■■□□□ 1.57
CHRNA7-202ENST00000437966 SCN11AQ9UI33 1791 aa24.83■■□□□ 1.57
CHRNA7-202ENST00000437966 ABCC4O15439 1325 aa24.83■■□□□ 1.57
CHRNA7-202ENST00000437966 HSP90AB1P08238 724 aaKnown RBP24.82■■□□□ 1.56
CHRNA7-202ENST00000437966 PLEKHG2Q9H7P9 1386 aa24.82■■□□□ 1.56
CHRNA7-202ENST00000437966 SIPA1L3O60292 1781 aaPredicted RBP24.82■■□□□ 1.56
CHRNA7-202ENST00000437966 CABP4P57796 275 aa24.81■■□□□ 1.56
CHRNA7-202ENST00000437966 CENPQQ7L2Z9 268 aaPredicted RBP24.8■■□□□ 1.56
CHRNA7-202ENST00000437966 RGS12O14924 1447 aa24.8■■□□□ 1.56
CHRNA7-202ENST00000437966 ZNF790Q6PG37 636 aa24.79■■□□□ 1.56
CHRNA7-202ENST00000437966 SOS1Q07889 1333 aaPredicted RBP24.79■■□□□ 1.56
CHRNA7-202ENST00000437966 F6X3S4 739 aa24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 AAMPQ13685 434 aa24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 ZBTB40Q9NUA8 1239 aa24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 PTPRCP08575 1304 aa24.78■■□□□ 1.56
CHRNA7-202ENST00000437966 ZBTB7BO15156 539 aaPredicted RBP24.77■■□□□ 1.56
CHRNA7-202ENST00000437966 ANXA1P04083 346 aa24.77■■□□□ 1.56
CHRNA7-202ENST00000437966 PHAXQ9H814 394 aaKnown RBP24.77■■□□□ 1.56
CHRNA7-202ENST00000437966 TSHZ2Q9NRE2 1034 aa24.77■■□□□ 1.56
CHRNA7-202ENST00000437966 FLIIQ13045 1269 aa24.76■■□□□ 1.55
CHRNA7-202ENST00000437966 CHPF2Q9P2E5 772 aa24.76■■□□□ 1.55
CHRNA7-202ENST00000437966 JCADQ9P266 1359 aa24.76■■□□□ 1.55
CHRNA7-202ENST00000437966 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 SHANK3Q9BYB0 1731 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 HEG1Q9ULI3 1381 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 HOXB7P09629 217 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 SLC4A10Q6U841 1118 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 C8orf37Q96NL8 207 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
CHRNA7-202ENST00000437966 FKBP5Q13451 457 aaPredicted RBP24.74■■□□□ 1.55
CHRNA7-202ENST00000437966 ZNF496Q96IT1 587 aaPredicted RBP24.74■■□□□ 1.55
CHRNA7-202ENST00000437966 CCDC9Q9Y3X0 531 aaKnown RBP24.74■■□□□ 1.55
CHRNA7-202ENST00000437966 DISP2A7MBM2 1401 aa24.74■■□□□ 1.55
CHRNA7-202ENST00000437966 INTS3Q68E01 1043 aaKnown RBP24.73■■□□□ 1.55
CHRNA7-202ENST00000437966 MRC1P22897 1456 aa24.73■■□□□ 1.55
CHRNA7-202ENST00000437966 SPATA31A1Q5TZJ5 1347 aa24.72■■□□□ 1.55
CHRNA7-202ENST00000437966 TTC5Q8N0Z6 440 aa24.72■■□□□ 1.55
CHRNA7-202ENST00000437966 ERVV-2B6SEH9 535 aa24.72■■□□□ 1.55
CHRNA7-202ENST00000437966 HSPA1LP34931 641 aa24.72■■□□□ 1.55
CHRNA7-202ENST00000437966 NGLY1Q96IV0 654 aa24.71■■□□□ 1.55
CHRNA7-202ENST00000437966 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
CHRNA7-202ENST00000437966 EXOC5O00471 708 aa24.7■■□□□ 1.55
CHRNA7-202ENST00000437966 PROSER3Q2NL68 480 aa24.7■■□□□ 1.55
CHRNA7-202ENST00000437966 RWDD1Q9H446 243 aaPredicted RBP24.7■■□□□ 1.55
CHRNA7-202ENST00000437966 SLIT2O94813 1529 aa24.69■■□□□ 1.54
CHRNA7-202ENST00000437966 SPATA31A5Q5VU36 1347 aa24.68■■□□□ 1.54
CHRNA7-202ENST00000437966 SPATA31A7Q8IWB4 1347 aa24.68■■□□□ 1.54
CHRNA7-202ENST00000437966 FMNL2Q96PY5 1086 aa24.67■■□□□ 1.54
CHRNA7-202ENST00000437966 DBF4Q9UBU7 674 aaPredicted RBP24.67■■□□□ 1.54
CHRNA7-202ENST00000437966 USP16Q9Y5T5 823 aa24.67■■□□□ 1.54
CHRNA7-202ENST00000437966 UNC5CLQ8IV45 518 aa24.66■■□□□ 1.54
CHRNA7-202ENST00000437966 SNRPA1P09661 255 aaKnown RBP24.65■■□□□ 1.54
CHRNA7-202ENST00000437966 MEIS3Q99687 375 aa24.65■■□□□ 1.54
CHRNA7-202ENST00000437966 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
CHRNA7-202ENST00000437966 CHMP4BQ9H444 224 aaKnown RBP24.65■■□□□ 1.54
CHRNA7-202ENST00000437966 LRP6O75581 1613 aa24.64■■□□□ 1.54
CHRNA7-202ENST00000437966 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.53
CHRNA7-202ENST00000437966 CCT4P50991 539 aaKnown RBP24.64■■□□□ 1.53
CHRNA7-202ENST00000437966 TMOD3Q9NYL9 352 aa24.64■■□□□ 1.53
CHRNA7-202ENST00000437966 THRAP3Q9Y2W1 955 aaKnown RBP24.64■■□□□ 1.53
CHRNA7-202ENST00000437966 C5P01031 1676 aa24.64■■□□□ 1.53
CHRNA7-202ENST00000437966 PTCD1O75127 700 aaKnown RBP24.63■■□□□ 1.53
CHRNA7-202ENST00000437966 HDAC1Q13547 482 aaPredicted RBP24.63■■□□□ 1.53
CHRNA7-202ENST00000437966 PDIA6Q15084 440 aa24.63■■□□□ 1.53
CHRNA7-202ENST00000437966 TOGARAM1Q9Y4F4 1720 aa24.63■■□□□ 1.53
CHRNA7-202ENST00000437966 MYL6BP14649 208 aa24.62■■□□□ 1.53
CHRNA7-202ENST00000437966 RGS3P49796 1198 aa24.62■■□□□ 1.53
CHRNA7-202ENST00000437966 PIGBQ92521 554 aa24.62■■□□□ 1.53
CHRNA7-202ENST00000437966 DDB1Q16531 1140 aa24.62■■□□□ 1.53
CHRNA7-202ENST00000437966 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
CHRNA7-202ENST00000437966 NWD2Q9ULI1 1742 aa24.61■■□□□ 1.53
CHRNA7-202ENST00000437966 BCL9LQ86UU0 1499 aa24.61■■□□□ 1.53
CHRNA7-202ENST00000437966 PI4KAP2A4QPH2 592 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms