RNA–Protein interactions for RNA: ENST00000437568.6

PMS2P3-205, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, human

TSL 5

Gene PMS2P3, Length 1,185 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMS2P3-205	ENST00000437568	ATP6V1A	P38606	617 aa		33.93	■■■■□ 3.02
PMS2P3-205	ENST00000437568	AMIGO3	Q86WK7	504 aa		33.93	■■■■□ 3.02
PMS2P3-205	ENST00000437568	FLAD1	Q8NFF5	587 aa		33.93	■■■■□ 3.02
PMS2P3-205	ENST00000437568	POLD1	P28340	1107 aa		33.92	■■■■□ 3.02
PMS2P3-205	ENST00000437568	AKAP4	Q5JQC9	854 aa		33.92	■■■■□ 3.02
PMS2P3-205	ENST00000437568	AK7	Q96M32	723 aa		33.92	■■■■□ 3.02
PMS2P3-205	ENST00000437568	SLC4A9	Q96Q91	983 aa		33.91	■■■■□ 3.02
PMS2P3-205	ENST00000437568	NFATC2IP	Q8NCF5	419 aa		33.9	■■■■□ 3.02
PMS2P3-205	ENST00000437568	MAP3K5	Q99683	1374 aa		33.89	■■■■□ 3.02
PMS2P3-205	ENST00000437568	MTHFSD	Q2M296	383 aa	Known RBP	33.88	■■■■□ 3.01
PMS2P3-205	ENST00000437568	SMIM5	Q71RC9	77 aa		33.87	■■■■□ 3.01
PMS2P3-205	ENST00000437568	RBM42	Q9BTD8	480 aa	Known RBP	33.86	■■■■□ 3.01
PMS2P3-205	ENST00000437568	LGR6	Q9HBX8	967 aa		33.86	■■■■□ 3.01
PMS2P3-205	ENST00000437568	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.85	■■■■□ 3.01
PMS2P3-205	ENST00000437568	DCAF8L1	A6NGE4	600 aa		33.85	■■■■□ 3.01
PMS2P3-205	ENST00000437568	U2SURP	O15042	1029 aa	Known RBP	33.85	■■■■□ 3.01
PMS2P3-205	ENST00000437568	PPP2R1A	P30153	589 aa		33.85	■■■■□ 3.01
PMS2P3-205	ENST00000437568	SSFA2	P28290	1259 aa		33.84	■■■■□ 3.01
PMS2P3-205	ENST00000437568	MSL1	Q68DK7	614 aa		33.84	■■■■□ 3.01
PMS2P3-205	ENST00000437568	RNMT	O43148	476 aa	Known RBP	33.82	■■■■□ 3
PMS2P3-205	ENST00000437568	PHF14	O94880	888 aa		33.82	■■■■□ 3
PMS2P3-205	ENST00000437568	CFAP53	Q96M91	514 aa		33.82	■■■■□ 3
PMS2P3-205	ENST00000437568	UBR3	Q6ZT12	1888 aa		33.82	■■■■□ 3
PMS2P3-205	ENST00000437568	GNPAT	O15228	680 aa		33.81	■■■■□ 3
PMS2P3-205	ENST00000437568	SLC52A2	Q9HAB3	445 aa		33.81	■■■■□ 3
PMS2P3-205	ENST00000437568	ZNF831	Q5JPB2	1677 aa		33.8	■■■■□ 3
PMS2P3-205	ENST00000437568	SCN11A	Q9UI33	1791 aa		33.8	■■■■□ 3
PMS2P3-205	ENST00000437568	PTCD1	O75127	700 aa	Known RBP	33.78	■■■■□ 3
PMS2P3-205	ENST00000437568	RC3H1	Q5TC82	1133 aa	Known RBP	33.78	■■■■□ 3
PMS2P3-205	ENST00000437568	KLHL34	Q8N239	644 aa		33.76	■■■□□ 2.99
PMS2P3-205	ENST00000437568	CNTNAP4	Q9C0A0	1308 aa		33.75	■■■□□ 2.99
PMS2P3-205	ENST00000437568	MRC1	P22897	1456 aa		33.75	■■■□□ 2.99
PMS2P3-205	ENST00000437568	RSPH6A	Q9H0K4	717 aa		33.73	■■■□□ 2.99
PMS2P3-205	ENST00000437568	NUDC	Q9Y266	331 aa		33.73	■■■□□ 2.99
PMS2P3-205	ENST00000437568	RTCB	Q9Y3I0	505 aa	Known RBP	33.73	■■■□□ 2.99
PMS2P3-205	ENST00000437568	ADAMTS7	Q9UKP4	1686 aa		33.73	■■■□□ 2.99
PMS2P3-205	ENST00000437568	GAS2L2	Q8NHY3	880 aa		33.72	■■■□□ 2.99
PMS2P3-205	ENST00000437568	NLGN2	Q8NFZ4	835 aa		33.71	■■■□□ 2.99
PMS2P3-205	ENST00000437568	PHACTR3	Q96KR7	559 aa		33.71	■■■□□ 2.99
PMS2P3-205	ENST00000437568	COL5A3	P25940	1745 aa	Predicted RBP	33.7	■■■□□ 2.99
PMS2P3-205	ENST00000437568	RPS6KA4	O75676	772 aa		33.7	■■■□□ 2.99
PMS2P3-205	ENST00000437568	TRAPPC3L	Q5T215	181 aa		33.7	■■■□□ 2.99
PMS2P3-205	ENST00000437568	PRKAR2B	P31323	418 aa		33.69	■■■□□ 2.98
PMS2P3-205	ENST00000437568	SLC39A6	Q13433	755 aa		33.69	■■■□□ 2.98
PMS2P3-205	ENST00000437568	IL17RE	Q8NFR9	667 aa		33.68	■■■□□ 2.98
PMS2P3-205	ENST00000437568	GNAT3	A8MTJ3	354 aa		33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	ADRA2B	P18089	450 aa		33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	YY1	P25490	414 aa		33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	ARHGEF1	Q92888	912 aa	Known RBP	33.67	■■■□□ 2.98
PMS2P3-205	ENST00000437568	CRKL	P46109	303 aa	Known RBP	33.66	■■■□□ 2.98
PMS2P3-205	ENST00000437568	CD2AP	Q9Y5K6	639 aa		33.65	■■■□□ 2.98
PMS2P3-205	ENST00000437568	CIC	Q96RK0	1608 aa	Predicted RBP	33.64	■■■□□ 2.98
PMS2P3-205	ENST00000437568	TJP1	Q07157	1748 aa		33.63	■■■□□ 2.97
PMS2P3-205	ENST00000437568	FCHSD2	O94868	740 aa		33.63	■■■□□ 2.97
PMS2P3-205	ENST00000437568	DNAJC10	Q8IXB1	793 aa		33.63	■■■□□ 2.97
PMS2P3-205	ENST00000437568	MYH14	Q7Z406	1995 aa	Known RBP	33.62	■■■□□ 2.97
PMS2P3-205	ENST00000437568	VIRMA	Q69YN4	1812 aa	Known RBP	33.62	■■■□□ 2.97
PMS2P3-205	ENST00000437568	GPR162	Q16538	588 aa		33.61	■■■□□ 2.97
PMS2P3-205	ENST00000437568	INTS5	Q6P9B9	1019 aa	Known RBP	33.61	■■■□□ 2.97
PMS2P3-205	ENST00000437568	KCP	Q6ZWJ8	1503 aa		33.61	■■■□□ 2.97
PMS2P3-205	ENST00000437568	RFC4	P35249	363 aa		33.59	■■■□□ 2.97
PMS2P3-205	ENST00000437568	TEF	Q10587	303 aa		33.58	■■■□□ 2.97
PMS2P3-205	ENST00000437568	NLGN1	Q8N2Q7	840 aa		33.58	■■■□□ 2.97
PMS2P3-205	ENST00000437568	CEMIP	Q8WUJ3	1361 aa		33.58	■■■□□ 2.97
PMS2P3-205	ENST00000437568	CYP19A1	P11511	503 aa	Predicted RBP	33.57	■■■□□ 2.96
PMS2P3-205	ENST00000437568	GYS1	P13807	737 aa		33.57	■■■□□ 2.96
PMS2P3-205	ENST00000437568	VSIG10	Q8N0Z9	540 aa		33.57	■■■□□ 2.96
PMS2P3-205	ENST00000437568	MMP10	P09238	476 aa		33.56	■■■□□ 2.96
PMS2P3-205	ENST00000437568	DDX10	Q13206	875 aa	Known RBP	33.56	■■■□□ 2.96
PMS2P3-205	ENST00000437568	CCDC87	Q9NVE4	849 aa		33.55	■■■□□ 2.96
PMS2P3-205	ENST00000437568	PELP1	Q8IZL8	1130 aa	Known RBP	33.53	■■■□□ 2.96
PMS2P3-205	ENST00000437568	TTC5	Q8N0Z6	440 aa		33.53	■■■□□ 2.96
PMS2P3-205	ENST00000437568	ZNF790	Q6PG37	636 aa		33.52	■■■□□ 2.96
PMS2P3-205	ENST00000437568	YBX3	P16989	372 aa	Known RBP eCLIP	33.51	■■■□□ 2.95
PMS2P3-205	ENST00000437568	RALBP1	Q15311	655 aa		33.51	■■■□□ 2.95
PMS2P3-205	ENST00000437568	SRP68	Q9UHB9	627 aa	Known RBP	33.51	■■■□□ 2.95
PMS2P3-205	ENST00000437568	UBR2	Q8IWV8	1755 aa		33.5	■■■□□ 2.95
PMS2P3-205	ENST00000437568	ZNF496	Q96IT1	587 aa	Predicted RBP	33.5	■■■□□ 2.95
PMS2P3-205	ENST00000437568	SOS1	Q07889	1333 aa	Predicted RBP	33.5	■■■□□ 2.95
PMS2P3-205	ENST00000437568	USP42	Q9H9J4	1324 aa	Known RBP	33.5	■■■□□ 2.95
PMS2P3-205	ENST00000437568	SIPA1L3	O60292	1781 aa	Predicted RBP	33.49	■■■□□ 2.95
PMS2P3-205	ENST00000437568	C4A	P0C0L4	1744 aa		33.48	■■■□□ 2.95
PMS2P3-205	ENST00000437568	ZBTB1	Q9Y2K1	713 aa		33.47	■■■□□ 2.95
PMS2P3-205	ENST00000437568	HTATSF1	O43719	755 aa	Known RBP	33.46	■■■□□ 2.95
PMS2P3-205	ENST00000437568	MCM10	Q7L590	875 aa		33.46	■■■□□ 2.95
PMS2P3-205	ENST00000437568	HEG1	Q9ULI3	1381 aa		33.46	■■■□□ 2.95
PMS2P3-205	ENST00000437568	BTBD11	A6QL63	1104 aa		33.45	■■■□□ 2.95
PMS2P3-205	ENST00000437568	KCNQ3	O43525	872 aa		33.45	■■■□□ 2.95
PMS2P3-205	ENST00000437568	FKBP8	Q14318	412 aa		33.45	■■■□□ 2.95
PMS2P3-205	ENST00000437568	RTF1	Q92541	710 aa	Known RBP	33.45	■■■□□ 2.95
PMS2P3-205	ENST00000437568	PLEKHF1	Q96S99	279 aa		33.45	■■■□□ 2.95
PMS2P3-205	ENST00000437568	GRIN3B	O60391	1043 aa		33.44	■■■□□ 2.94
PMS2P3-205	ENST00000437568	STARD3NL	O95772	234 aa		33.43	■■■□□ 2.94
PMS2P3-205	ENST00000437568	DCTN1	Q14203	1278 aa		33.43	■■■□□ 2.94
PMS2P3-205	ENST00000437568	FMNL2	Q96PY5	1086 aa		33.42	■■■□□ 2.94
PMS2P3-205	ENST00000437568	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.42	■■■□□ 2.94
PMS2P3-205	ENST00000437568	PARP3	Q9Y6F1	533 aa		33.42	■■■□□ 2.94
PMS2P3-205	ENST00000437568	USPL1	Q5W0Q7	1092 aa		33.41	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms