RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 BAG6P46379 1132 aa19.24■□□□□ 0.67
SKA2-202ENST00000437036 PTF1AQ7RTS3 328 aa19.24■□□□□ 0.67
SKA2-202ENST00000437036 UPF1Q92900 1129 aaKnown RBP eCLIP19.24■□□□□ 0.67
SKA2-202ENST00000437036 ADAMTS7Q9UKP4 1686 aa19.24■□□□□ 0.67
SKA2-202ENST00000437036 MRC1P22897 1456 aa19.23■□□□□ 0.67
SKA2-202ENST00000437036 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
SKA2-202ENST00000437036 BTBD11A6QL63 1104 aa19.23■□□□□ 0.67
SKA2-202ENST00000437036 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
SKA2-202ENST00000437036 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
SKA2-202ENST00000437036 TTC5Q8N0Z6 440 aa19.22■□□□□ 0.67
SKA2-202ENST00000437036 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
SKA2-202ENST00000437036 PLSCR1O15162 318 aa19.21■□□□□ 0.67
SKA2-202ENST00000437036 WDR63Q8IWG1 891 aa19.21■□□□□ 0.67
SKA2-202ENST00000437036 ATG3Q9NT62 314 aa19.21■□□□□ 0.67
SKA2-202ENST00000437036 ASAP1Q9ULH1 1129 aa19.21■□□□□ 0.67
SKA2-202ENST00000437036 ITGB4P16144 1822 aa19.21■□□□□ 0.67
SKA2-202ENST00000437036 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
SKA2-202ENST00000437036 GNAI1P63096 354 aa19.19■□□□□ 0.66
SKA2-202ENST00000437036 TSPYL4Q9UJ04 414 aa19.19■□□□□ 0.66
SKA2-202ENST00000437036 IL16Q14005 1332 aa19.19■□□□□ 0.66
SKA2-202ENST00000437036 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
SKA2-202ENST00000437036 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
SKA2-202ENST00000437036 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
SKA2-202ENST00000437036 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
SKA2-202ENST00000437036 CFAP44Q96MT7 982 aa19.18■□□□□ 0.66
SKA2-202ENST00000437036 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
SKA2-202ENST00000437036 BTAF1O14981 1849 aa19.18■□□□□ 0.66
SKA2-202ENST00000437036 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
SKA2-202ENST00000437036 RBM42Q9BTD8 480 aaKnown RBP19.17■□□□□ 0.66
SKA2-202ENST00000437036 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
SKA2-202ENST00000437036 CHL1O00533 1208 aa19.16■□□□□ 0.66
SKA2-202ENST00000437036 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
SKA2-202ENST00000437036 EN1Q05925 392 aaPredicted RBP19.16■□□□□ 0.66
SKA2-202ENST00000437036 TNS1Q9HBL0 1735 aaKnown RBP19.15■□□□□ 0.66
SKA2-202ENST00000437036 LOC102724428A0A0B4J2F2 783 aa19.15■□□□□ 0.66
SKA2-202ENST00000437036 SIK1P57059 783 aa19.15■□□□□ 0.66
SKA2-202ENST00000437036 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
SKA2-202ENST00000437036 DEFB132Q7Z7B7 95 aa19.15■□□□□ 0.66
SKA2-202ENST00000437036 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
SKA2-202ENST00000437036 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
SKA2-202ENST00000437036 TXNRD1Q16881 649 aa19.14■□□□□ 0.65
SKA2-202ENST00000437036 CAMKK2Q96RR4 588 aa19.14■□□□□ 0.65
SKA2-202ENST00000437036 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
SKA2-202ENST00000437036 SOCS7O14512 581 aa19.13■□□□□ 0.65
SKA2-202ENST00000437036 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
SKA2-202ENST00000437036 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
SKA2-202ENST00000437036 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
SKA2-202ENST00000437036 ZNF521Q96K83 1311 aa19.13■□□□□ 0.65
SKA2-202ENST00000437036 SIPA1L3O60292 1781 aaPredicted RBP19.13■□□□□ 0.65
SKA2-202ENST00000437036 KCNQ3O43525 872 aa19.12■□□□□ 0.65
SKA2-202ENST00000437036 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
SKA2-202ENST00000437036 VSIG10Q8N0Z9 540 aa19.12■□□□□ 0.65
SKA2-202ENST00000437036 E9PSI1 815 aa19.11■□□□□ 0.65
SKA2-202ENST00000437036 ZNF496Q96IT1 587 aaPredicted RBP19.11■□□□□ 0.65
SKA2-202ENST00000437036 TEX13AQ9BXU3 409 aaPredicted RBP19.11■□□□□ 0.65
SKA2-202ENST00000437036 MBIPQ9NS73 344 aa19.11■□□□□ 0.65
SKA2-202ENST00000437036 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
SKA2-202ENST00000437036 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
SKA2-202ENST00000437036 HEG1Q9ULI3 1381 aa19.09■□□□□ 0.65
SKA2-202ENST00000437036 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
SKA2-202ENST00000437036 PROM2Q8N271 834 aa19.09■□□□□ 0.65
SKA2-202ENST00000437036 PAPPAQ13219 1627 aa19.09■□□□□ 0.65
SKA2-202ENST00000437036 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
SKA2-202ENST00000437036 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
SKA2-202ENST00000437036 KCPQ6ZWJ8 1503 aa19.07■□□□□ 0.64
SKA2-202ENST00000437036 STARD3NLO95772 234 aa19.07■□□□□ 0.64
SKA2-202ENST00000437036 TSR2Q969E8 191 aaKnown RBP19.07■□□□□ 0.64
SKA2-202ENST00000437036 KCNQ4P56696 695 aa19.06■□□□□ 0.64
SKA2-202ENST00000437036 SLFN5Q08AF3 891 aa19.06■□□□□ 0.64
SKA2-202ENST00000437036 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
SKA2-202ENST00000437036 SLC4A9Q96Q91 983 aa19.06■□□□□ 0.64
SKA2-202ENST00000437036 LRRC4BQ9NT99 713 aa19.06■□□□□ 0.64
SKA2-202ENST00000437036 LY75O60449 1722 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
SKA2-202ENST00000437036 ITPK1Q13572 414 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 NBPF14Q5TI25 921 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
SKA2-202ENST00000437036 KDM3BQ7LBC6 1761 aa19.05■□□□□ 0.64
SKA2-202ENST00000437036 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
SKA2-202ENST00000437036 HOXB7P09629 217 aa19.04■□□□□ 0.64
SKA2-202ENST00000437036 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
SKA2-202ENST00000437036 DUSP27Q5VZP5 1158 aa19.03■□□□□ 0.64
SKA2-202ENST00000437036 LINC00116Q8NCU8 138 aa19.03■□□□□ 0.64
SKA2-202ENST00000437036 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
SKA2-202ENST00000437036 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
SKA2-202ENST00000437036 RC3H1Q5TC82 1133 aaKnown RBP19.02■□□□□ 0.64
SKA2-202ENST00000437036 AK7Q96M32 723 aa19.02■□□□□ 0.64
SKA2-202ENST00000437036 STK32BQ9NY57 414 aa19.02■□□□□ 0.64
SKA2-202ENST00000437036 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
SKA2-202ENST00000437036 USP16Q9Y5T5 823 aa19.01■□□□□ 0.63
SKA2-202ENST00000437036 CNTNAP4Q9C0A0 1308 aa19■□□□□ 0.63
SKA2-202ENST00000437036 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
SKA2-202ENST00000437036 CRKLP46109 303 aaKnown RBP19■□□□□ 0.63
SKA2-202ENST00000437036 EXOSC9Q06265 439 aaKnown RBP19■□□□□ 0.63
SKA2-202ENST00000437036 KRT24Q2M2I5 525 aa19■□□□□ 0.63
SKA2-202ENST00000437036 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
SKA2-202ENST00000437036 CCDC87Q9NVE4 849 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms