RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
EXT1-202ENST00000436216 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
EXT1-202ENST00000436216 LGR6Q9HBX8 967 aa16.63■□□□□ 0.25
EXT1-202ENST00000436216 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
EXT1-202ENST00000436216 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
EXT1-202ENST00000436216 ITPK1Q13572 414 aa16.62■□□□□ 0.25
EXT1-202ENST00000436216 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
EXT1-202ENST00000436216 FCHSD2O94868 740 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
EXT1-202ENST00000436216 LINC00116Q8NCU8 138 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 MRC1P22897 1456 aa16.61■□□□□ 0.25
EXT1-202ENST00000436216 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
EXT1-202ENST00000436216 RALBP1Q15311 655 aa16.6■□□□□ 0.25
EXT1-202ENST00000436216 FLAD1Q8NFF5 587 aa16.6■□□□□ 0.25
EXT1-202ENST00000436216 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
EXT1-202ENST00000436216 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
EXT1-202ENST00000436216 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
EXT1-202ENST00000436216 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
EXT1-202ENST00000436216 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
EXT1-202ENST00000436216 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
EXT1-202ENST00000436216 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
EXT1-202ENST00000436216 UBR3Q6ZT12 1888 aa16.57■□□□□ 0.24
EXT1-202ENST00000436216 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
EXT1-202ENST00000436216 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
EXT1-202ENST00000436216 RC3H1Q5TC82 1133 aaKnown RBP16.57■□□□□ 0.24
EXT1-202ENST00000436216 IL17REQ8NFR9 667 aa16.57■□□□□ 0.24
EXT1-202ENST00000436216 AK7Q96M32 723 aa16.57■□□□□ 0.24
EXT1-202ENST00000436216 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
EXT1-202ENST00000436216 SSFA2P28290 1259 aa16.56■□□□□ 0.24
EXT1-202ENST00000436216 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
EXT1-202ENST00000436216 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
EXT1-202ENST00000436216 ARXQ96QS3 562 aa16.55■□□□□ 0.24
EXT1-202ENST00000436216 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
EXT1-202ENST00000436216 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
EXT1-202ENST00000436216 COL5A3P25940 1745 aaPredicted RBP16.54■□□□□ 0.24
EXT1-202ENST00000436216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.54■□□□□ 0.24
EXT1-202ENST00000436216 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
EXT1-202ENST00000436216 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
EXT1-202ENST00000436216 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
EXT1-202ENST00000436216 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.24
EXT1-202ENST00000436216 GNPATO15228 680 aa16.52■□□□□ 0.24
EXT1-202ENST00000436216 MSH5O43196 834 aa16.52■□□□□ 0.24
EXT1-202ENST00000436216 POLD1P28340 1107 aa16.52■□□□□ 0.24
EXT1-202ENST00000436216 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
EXT1-202ENST00000436216 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
EXT1-202ENST00000436216 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
EXT1-202ENST00000436216 UTRNP46939 3433 aa16.51■□□□□ 0.23
EXT1-202ENST00000436216 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
EXT1-202ENST00000436216 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
EXT1-202ENST00000436216 RPS6KA4O75676 772 aa16.51■□□□□ 0.23
EXT1-202ENST00000436216 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
EXT1-202ENST00000436216 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
EXT1-202ENST00000436216 TJP1Q07157 1748 aa16.5■□□□□ 0.23
EXT1-202ENST00000436216 PHF14O94880 888 aa16.5■□□□□ 0.23
EXT1-202ENST00000436216 TEFQ10587 303 aa16.5■□□□□ 0.23
EXT1-202ENST00000436216 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
EXT1-202ENST00000436216 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
EXT1-202ENST00000436216 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
EXT1-202ENST00000436216 ADRA2BP18089 450 aa16.49■□□□□ 0.23
EXT1-202ENST00000436216 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
EXT1-202ENST00000436216 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
EXT1-202ENST00000436216 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
EXT1-202ENST00000436216 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
EXT1-202ENST00000436216 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
EXT1-202ENST00000436216 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
EXT1-202ENST00000436216 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
EXT1-202ENST00000436216 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
EXT1-202ENST00000436216 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
EXT1-202ENST00000436216 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
EXT1-202ENST00000436216 DNAJC10Q8IXB1 793 aa16.47■□□□□ 0.23
EXT1-202ENST00000436216 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
EXT1-202ENST00000436216 NEFMP07197 916 aa16.45■□□□□ 0.22
EXT1-202ENST00000436216 MCM10Q7L590 875 aa16.45■□□□□ 0.22
EXT1-202ENST00000436216 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
EXT1-202ENST00000436216 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
EXT1-202ENST00000436216 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
EXT1-202ENST00000436216 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
EXT1-202ENST00000436216 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
EXT1-202ENST00000436216 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
EXT1-202ENST00000436216 NFE2L2Q16236 605 aa16.44■□□□□ 0.22
EXT1-202ENST00000436216 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
EXT1-202ENST00000436216 RFC4P35249 363 aa16.43■□□□□ 0.22
EXT1-202ENST00000436216 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
EXT1-202ENST00000436216 KCNQ3O43525 872 aa16.42■□□□□ 0.22
EXT1-202ENST00000436216 GYS1P13807 737 aa16.42■□□□□ 0.22
EXT1-202ENST00000436216 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
EXT1-202ENST00000436216 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
EXT1-202ENST00000436216 CD2APQ9Y5K6 639 aa16.42■□□□□ 0.22
EXT1-202ENST00000436216 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
EXT1-202ENST00000436216 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
EXT1-202ENST00000436216 STARD3NLO95772 234 aa16.41■□□□□ 0.22
EXT1-202ENST00000436216 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
EXT1-202ENST00000436216 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
EXT1-202ENST00000436216 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
EXT1-202ENST00000436216 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
EXT1-202ENST00000436216 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
EXT1-202ENST00000436216 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms