RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
TMEM40-204ENST00000435218 THSD7AQ9UPZ6 1657 aa19.46■□□□□ 0.7
TMEM40-204ENST00000435218 BCAR3O75815 825 aa19.45■□□□□ 0.7
TMEM40-204ENST00000435218 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
TMEM40-204ENST00000435218 FKBP8Q14318 412 aa19.45■□□□□ 0.7
TMEM40-204ENST00000435218 TSPYL6Q8N831 410 aa19.45■□□□□ 0.7
TMEM40-204ENST00000435218 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
TMEM40-204ENST00000435218 GLI3P10071 1580 aa19.43■□□□□ 0.7
TMEM40-204ENST00000435218 MIS18AQ9NYP9 233 aa19.43■□□□□ 0.7
TMEM40-204ENST00000435218 USP21Q9UK80 565 aa19.43■□□□□ 0.7
TMEM40-204ENST00000435218 DOT1LQ8TEK3 1739 aa19.42■□□□□ 0.7
TMEM40-204ENST00000435218 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
TMEM40-204ENST00000435218 ERVV-2B6SEH9 535 aa19.42■□□□□ 0.7
TMEM40-204ENST00000435218 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
TMEM40-204ENST00000435218 EXOC5O00471 708 aa19.41■□□□□ 0.7
TMEM40-204ENST00000435218 SSH1Q8WYL5 1049 aa19.41■□□□□ 0.7
TMEM40-204ENST00000435218 LAMB4A4D0S4 1761 aa19.41■□□□□ 0.7
TMEM40-204ENST00000435218 HOXB7P09629 217 aa19.41■□□□□ 0.7
TMEM40-204ENST00000435218 HEG1Q9ULI3 1381 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 ATRNO75882 1429 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 C5P01031 1676 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 AFF2P51816 1311 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 KIF16BQ96L93 1317 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 SMC4Q9NTJ3 1288 aa19.4■□□□□ 0.7
TMEM40-204ENST00000435218 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
TMEM40-204ENST00000435218 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
TMEM40-204ENST00000435218 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
TMEM40-204ENST00000435218 PLIN1O60240 522 aa19.38■□□□□ 0.69
TMEM40-204ENST00000435218 DDB1Q16531 1140 aa19.38■□□□□ 0.69
TMEM40-204ENST00000435218 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
TMEM40-204ENST00000435218 NFATC2IPQ8NCF5 419 aa19.38■□□□□ 0.69
TMEM40-204ENST00000435218 CCDC9Q9Y3X0 531 aaKnown RBP19.38■□□□□ 0.69
TMEM40-204ENST00000435218 KAT6BQ8WYB5 2073 aa19.38■□□□□ 0.69
TMEM40-204ENST00000435218 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
TMEM40-204ENST00000435218 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
TMEM40-204ENST00000435218 CABP4P57796 275 aa19.36■□□□□ 0.69
TMEM40-204ENST00000435218 BCL2L13Q9BXK5 485 aa19.36■□□□□ 0.69
TMEM40-204ENST00000435218 CHMP4AQ9BY43 222 aa19.36■□□□□ 0.69
TMEM40-204ENST00000435218 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
TMEM40-204ENST00000435218 MRPL50Q8N5N7 158 aaKnown RBP19.35■□□□□ 0.69
TMEM40-204ENST00000435218 N4BP2Q86UW6 1770 aaPredicted RBP19.35■□□□□ 0.69
TMEM40-204ENST00000435218 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
TMEM40-204ENST00000435218 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
TMEM40-204ENST00000435218 KCNQ3O43525 872 aa19.34■□□□□ 0.69
TMEM40-204ENST00000435218 MS4A1P11836 297 aa19.34■□□□□ 0.69
TMEM40-204ENST00000435218 ARHGAP45Q92619 1136 aa19.34■□□□□ 0.69
TMEM40-204ENST00000435218 GJD4Q96KN9 370 aaPredicted RBP19.34■□□□□ 0.69
TMEM40-204ENST00000435218 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.69
TMEM40-204ENST00000435218 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.68
TMEM40-204ENST00000435218 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
TMEM40-204ENST00000435218 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
TMEM40-204ENST00000435218 FAM98CQ17RN3 349 aaKnown RBP19.32■□□□□ 0.68
TMEM40-204ENST00000435218 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
TMEM40-204ENST00000435218 SBF2Q86WG5 1849 aa19.32■□□□□ 0.68
TMEM40-204ENST00000435218 BCL9O00512 1426 aa19.31■□□□□ 0.68
TMEM40-204ENST00000435218 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
TMEM40-204ENST00000435218 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
TMEM40-204ENST00000435218 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
TMEM40-204ENST00000435218 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
TMEM40-204ENST00000435218 NOB1Q9ULX3 412 aaKnown RBP19.3■□□□□ 0.68
TMEM40-204ENST00000435218 CICQ96RK0 1608 aaPredicted RBP19.3■□□□□ 0.68
TMEM40-204ENST00000435218 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
TMEM40-204ENST00000435218 MARCH10Q8NA82 808 aaPredicted RBP19.3■□□□□ 0.68
TMEM40-204ENST00000435218 TMOD3Q9NYL9 352 aa19.3■□□□□ 0.68
TMEM40-204ENST00000435218 TRIM27P14373 513 aa19.29■□□□□ 0.68
TMEM40-204ENST00000435218 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
TMEM40-204ENST00000435218 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
TMEM40-204ENST00000435218 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
TMEM40-204ENST00000435218 BRWD3Q6RI45 1802 aa19.29■□□□□ 0.68
TMEM40-204ENST00000435218 PTPRCP08575 1304 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 NHSQ6T4R5 1651 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 FMNL2Q96PY5 1086 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 ZNF831Q5JPB2 1677 aa19.28■□□□□ 0.68
TMEM40-204ENST00000435218 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
TMEM40-204ENST00000435218 EXOC6Q8TAG9 804 aa19.27■□□□□ 0.68
TMEM40-204ENST00000435218 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
TMEM40-204ENST00000435218 RGS12O14924 1447 aa19.26■□□□□ 0.67
TMEM40-204ENST00000435218 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 AAMPQ13685 434 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 PIGBQ92521 554 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
TMEM40-204ENST00000435218 QTRT2Q9H974 415 aaKnown RBP19.25■□□□□ 0.67
TMEM40-204ENST00000435218 ABCC4O15439 1325 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
TMEM40-204ENST00000435218 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
TMEM40-204ENST00000435218 RLBP1P12271 317 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 ILDR1Q86SU0 546 aaPredicted RBP19.25■□□□□ 0.67
TMEM40-204ENST00000435218 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
TMEM40-204ENST00000435218 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
TMEM40-204ENST00000435218 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
TMEM40-204ENST00000435218 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
TMEM40-204ENST00000435218 TJP1Q07157 1748 aa19.24■□□□□ 0.67
TMEM40-204ENST00000435218 PXDNLA1KZ92 1463 aa19.23■□□□□ 0.67
TMEM40-204ENST00000435218 MVPQ14764 893 aaKnown RBP19.23■□□□□ 0.67
TMEM40-204ENST00000435218 DBF4Q9UBU7 674 aaPredicted RBP19.23■□□□□ 0.67
TMEM40-204ENST00000435218 BTAF1O14981 1849 aa19.23■□□□□ 0.67
TMEM40-204ENST00000435218 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
TMEM40-204ENST00000435218 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms