RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
LINC01055-201ENST00000435067 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
LINC01055-201ENST00000435067 THSD7AQ9UPZ6 1657 aa13.44□□□□□ -0.26
LINC01055-201ENST00000435067 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
LINC01055-201ENST00000435067 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
LINC01055-201ENST00000435067 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
LINC01055-201ENST00000435067 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
LINC01055-201ENST00000435067 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
LINC01055-201ENST00000435067 C8orf58Q8NAV2 365 aa13.43□□□□□ -0.26
LINC01055-201ENST00000435067 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
LINC01055-201ENST00000435067 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
LINC01055-201ENST00000435067 KCNQ3O43525 872 aa13.42□□□□□ -0.26
LINC01055-201ENST00000435067 MRC1P22897 1456 aa13.42□□□□□ -0.26
LINC01055-201ENST00000435067 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
LINC01055-201ENST00000435067 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
LINC01055-201ENST00000435067 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
LINC01055-201ENST00000435067 RGS17Q9UGC6 210 aaPredicted RBP13.42□□□□□ -0.26
LINC01055-201ENST00000435067 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
LINC01055-201ENST00000435067 TWISTNBQ3B726 338 aaPredicted RBP13.41□□□□□ -0.26
LINC01055-201ENST00000435067 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
LINC01055-201ENST00000435067 KDM3BQ7LBC6 1761 aa13.41□□□□□ -0.26
LINC01055-201ENST00000435067 VAMP4O75379 141 aa13.4□□□□□ -0.26
LINC01055-201ENST00000435067 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
LINC01055-201ENST00000435067 ZNF790Q6PG37 636 aa13.4□□□□□ -0.26
LINC01055-201ENST00000435067 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
LINC01055-201ENST00000435067 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
LINC01055-201ENST00000435067 BCAR3O75815 825 aa13.39□□□□□ -0.27
LINC01055-201ENST00000435067 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
LINC01055-201ENST00000435067 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
LINC01055-201ENST00000435067 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
LINC01055-201ENST00000435067 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
LINC01055-201ENST00000435067 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
LINC01055-201ENST00000435067 TTC5Q8N0Z6 440 aa13.39□□□□□ -0.27
LINC01055-201ENST00000435067 PIGBQ92521 554 aa13.39□□□□□ -0.27
LINC01055-201ENST00000435067 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
LINC01055-201ENST00000435067 ITGB4P16144 1822 aa13.38□□□□□ -0.27
LINC01055-201ENST00000435067 RXRBP28702 533 aa13.38□□□□□ -0.27
LINC01055-201ENST00000435067 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
LINC01055-201ENST00000435067 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
LINC01055-201ENST00000435067 BCL9O00512 1426 aa13.37□□□□□ -0.27
LINC01055-201ENST00000435067 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 KCNQ2O43526 872 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 PLIN1O60240 522 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
LINC01055-201ENST00000435067 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
LINC01055-201ENST00000435067 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
LINC01055-201ENST00000435067 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
LINC01055-201ENST00000435067 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
LINC01055-201ENST00000435067 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
LINC01055-201ENST00000435067 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
LINC01055-201ENST00000435067 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
LINC01055-201ENST00000435067 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
LINC01055-201ENST00000435067 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
LINC01055-201ENST00000435067 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
LINC01055-201ENST00000435067 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
LINC01055-201ENST00000435067 HEG1Q9ULI3 1381 aa13.34□□□□□ -0.27
LINC01055-201ENST00000435067 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
LINC01055-201ENST00000435067 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.27
LINC01055-201ENST00000435067 ALDH1L2Q3SY69 923 aa13.33□□□□□ -0.27
LINC01055-201ENST00000435067 FRAT1Q92837 279 aaPredicted RBP13.33□□□□□ -0.27
LINC01055-201ENST00000435067 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
LINC01055-201ENST00000435067 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
LINC01055-201ENST00000435067 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
LINC01055-201ENST00000435067 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
LINC01055-201ENST00000435067 RGS12O14924 1447 aa13.32□□□□□ -0.28
LINC01055-201ENST00000435067 HOXB7P09629 217 aa13.32□□□□□ -0.28
LINC01055-201ENST00000435067 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
LINC01055-201ENST00000435067 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
LINC01055-201ENST00000435067 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
LINC01055-201ENST00000435067 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
LINC01055-201ENST00000435067 CANXP27824 592 aaKnown RBP13.31□□□□□ -0.28
LINC01055-201ENST00000435067 CCDC30Q5VVM6 783 aa13.31□□□□□ -0.28
LINC01055-201ENST00000435067 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
LINC01055-201ENST00000435067 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.31□□□□□ -0.28
LINC01055-201ENST00000435067 C5P01031 1676 aa13.31□□□□□ -0.28
LINC01055-201ENST00000435067 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
LINC01055-201ENST00000435067 NEFLP07196 543 aa13.3□□□□□ -0.28
LINC01055-201ENST00000435067 STK31Q9BXU1 1019 aa13.3□□□□□ -0.28
LINC01055-201ENST00000435067 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
LINC01055-201ENST00000435067 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
LINC01055-201ENST00000435067 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
LINC01055-201ENST00000435067 SBF2Q86WG5 1849 aa13.29□□□□□ -0.28
LINC01055-201ENST00000435067 FKBP8Q14318 412 aa13.29□□□□□ -0.28
LINC01055-201ENST00000435067 C20orf194Q5TEA3 1177 aa13.29□□□□□ -0.28
LINC01055-201ENST00000435067 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
LINC01055-201ENST00000435067 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
LINC01055-201ENST00000435067 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
LINC01055-201ENST00000435067 EP400Q96L91 3159 aa13.28□□□□□ -0.28
LINC01055-201ENST00000435067 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
LINC01055-201ENST00000435067 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
LINC01055-201ENST00000435067 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
LINC01055-201ENST00000435067 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
LINC01055-201ENST00000435067 ANXA1P04083 346 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 G2E3Q7L622 706 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 SLC4A9Q96Q91 983 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms