RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
NUP50-210ENST00000434760 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
NUP50-210ENST00000434760 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
NUP50-210ENST00000434760 ATG3Q9NT62 314 aa21.44■■□□□ 1.02
NUP50-210ENST00000434760 ITPK1Q13572 414 aa21.43■■□□□ 1.02
NUP50-210ENST00000434760 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
NUP50-210ENST00000434760 LINC00116Q8NCU8 138 aa21.43■■□□□ 1.02
NUP50-210ENST00000434760 ERVV-2B6SEH9 535 aa21.42■■□□□ 1.02
NUP50-210ENST00000434760 UBR2Q8IWV8 1755 aa21.42■■□□□ 1.02
NUP50-210ENST00000434760 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
NUP50-210ENST00000434760 HSP90AB1P08238 724 aaKnown RBP21.41■■□□□ 1.02
NUP50-210ENST00000434760 POLD1P28340 1107 aa21.4■■□□□ 1.02
NUP50-210ENST00000434760 SLC4A9Q96Q91 983 aa21.4■■□□□ 1.02
NUP50-210ENST00000434760 AK7Q96M32 723 aa21.39■■□□□ 1.01
NUP50-210ENST00000434760 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
NUP50-210ENST00000434760 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
NUP50-210ENST00000434760 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
NUP50-210ENST00000434760 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
NUP50-210ENST00000434760 FLAD1Q8NFF5 587 aa21.37■■□□□ 1.01
NUP50-210ENST00000434760 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
NUP50-210ENST00000434760 KCPQ6ZWJ8 1503 aa21.36■■□□□ 1.01
NUP50-210ENST00000434760 SSFA2P28290 1259 aa21.36■■□□□ 1.01
NUP50-210ENST00000434760 C1orf141Q5JVX7 400 aa21.36■■□□□ 1.01
NUP50-210ENST00000434760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
NUP50-210ENST00000434760 MSH5O43196 834 aa21.35■■□□□ 1.01
NUP50-210ENST00000434760 DIAPH1O60610 1272 aaKnown RBP21.35■■□□□ 1.01
NUP50-210ENST00000434760 HMOX1P09601 288 aa21.35■■□□□ 1.01
NUP50-210ENST00000434760 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
NUP50-210ENST00000434760 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
NUP50-210ENST00000434760 PHF14O94880 888 aa21.33■■□□□ 1.01
NUP50-210ENST00000434760 YY1P25490 414 aa21.33■■□□□ 1.01
NUP50-210ENST00000434760 CNTNAP4Q9C0A0 1308 aa21.32■■□□□ 1
NUP50-210ENST00000434760 GNPATO15228 680 aa21.32■■□□□ 1
NUP50-210ENST00000434760 CABP4P57796 275 aa21.32■■□□□ 1
NUP50-210ENST00000434760 AKAP4Q5JQC9 854 aa21.32■■□□□ 1
NUP50-210ENST00000434760 DCAF8L1A6NGE4 600 aa21.31■■□□□ 1
NUP50-210ENST00000434760 KLHL34Q8N239 644 aa21.3■■□□□ 1
NUP50-210ENST00000434760 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
NUP50-210ENST00000434760 NFATC2IPQ8NCF5 419 aa21.29■■□□□ 1
NUP50-210ENST00000434760 CNGB1Q14028 1251 aaPredicted RBP21.28■■□□□ 1
NUP50-210ENST00000434760 RBM42Q9BTD8 480 aaKnown RBP21.28■■□□□ 1
NUP50-210ENST00000434760 SLC52A2Q9HAB3 445 aa21.28■■□□□ 1
NUP50-210ENST00000434760 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
NUP50-210ENST00000434760 LGR6Q9HBX8 967 aa21.27■■□□□ 1
NUP50-210ENST00000434760 RNMTO43148 476 aaKnown RBP21.26■□□□□ 0.99
NUP50-210ENST00000434760 RC3H1Q5TC82 1133 aaKnown RBP21.26■□□□□ 0.99
NUP50-210ENST00000434760 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
NUP50-210ENST00000434760 N4BP2Q86UW6 1770 aaPredicted RBP21.24■□□□□ 0.99
NUP50-210ENST00000434760 CD2APQ9Y5K6 639 aa21.24■□□□□ 0.99
NUP50-210ENST00000434760 C10orf71Q711Q0 1435 aa21.23■□□□□ 0.99
NUP50-210ENST00000434760 ADRA2BP18089 450 aa21.23■□□□□ 0.99
NUP50-210ENST00000434760 PPP2R1AP30153 589 aa21.23■□□□□ 0.99
NUP50-210ENST00000434760 RTCBQ9Y3I0 505 aaKnown RBP21.23■□□□□ 0.99
NUP50-210ENST00000434760 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
NUP50-210ENST00000434760 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
NUP50-210ENST00000434760 YBX3P16989 372 aaKnown RBP eCLIP21.22■□□□□ 0.99
NUP50-210ENST00000434760 CRKLP46109 303 aaKnown RBP21.22■□□□□ 0.99
NUP50-210ENST00000434760 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
NUP50-210ENST00000434760 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
NUP50-210ENST00000434760 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
NUP50-210ENST00000434760 CEMIPQ8WUJ3 1361 aa21.21■□□□□ 0.99
NUP50-210ENST00000434760 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
NUP50-210ENST00000434760 GPR162Q16538 588 aa21.2■□□□□ 0.98
NUP50-210ENST00000434760 ARHGEF1Q92888 912 aaKnown RBP21.2■□□□□ 0.98
NUP50-210ENST00000434760 SLC39A6Q13433 755 aa21.19■□□□□ 0.98
NUP50-210ENST00000434760 NRXN2Q9P2S2 1712 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
NUP50-210ENST00000434760 MMP10P09238 476 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 GYS1P13807 737 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 TRAPPC3LQ5T215 181 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
NUP50-210ENST00000434760 PRKAR2BP31323 418 aa21.17■□□□□ 0.98
NUP50-210ENST00000434760 INTS5Q6P9B9 1019 aaKnown RBP21.17■□□□□ 0.98
NUP50-210ENST00000434760 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
NUP50-210ENST00000434760 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
NUP50-210ENST00000434760 SOS1Q07889 1333 aaPredicted RBP21.16■□□□□ 0.98
NUP50-210ENST00000434760 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
NUP50-210ENST00000434760 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
NUP50-210ENST00000434760 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
NUP50-210ENST00000434760 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
NUP50-210ENST00000434760 IL17REQ8NFR9 667 aa21.15■□□□□ 0.98
NUP50-210ENST00000434760 BCORQ6W2J9 1755 aa21.15■□□□□ 0.98
NUP50-210ENST00000434760 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
NUP50-210ENST00000434760 CYP19A1P11511 503 aaPredicted RBP21.14■□□□□ 0.97
NUP50-210ENST00000434760 CCDC87Q9NVE4 849 aa21.14■□□□□ 0.97
NUP50-210ENST00000434760 LAMB4A4D0S4 1761 aa21.13■□□□□ 0.97
NUP50-210ENST00000434760 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
NUP50-210ENST00000434760 DLEC1Q9Y238 1755 aa21.13■□□□□ 0.97
NUP50-210ENST00000434760 RFC4P35249 363 aa21.13■□□□□ 0.97
NUP50-210ENST00000434760 NLGN1Q8N2Q7 840 aa21.13■□□□□ 0.97
NUP50-210ENST00000434760 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
NUP50-210ENST00000434760 COL15A1P39059 1388 aa21.12■□□□□ 0.97
NUP50-210ENST00000434760 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
NUP50-210ENST00000434760 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
NUP50-210ENST00000434760 ADCY9O60503 1353 aa21.1■□□□□ 0.97
NUP50-210ENST00000434760 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
NUP50-210ENST00000434760 NUDCQ9Y266 331 aa21.1■□□□□ 0.97
NUP50-210ENST00000434760 GRIN3BO60391 1043 aa21.09■□□□□ 0.97
NUP50-210ENST00000434760 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms