RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
FAM3A-212ENST00000434658 TRIM27P14373 513 aa23.59■■□□□ 1.37
FAM3A-212ENST00000434658 NBR1Q14596 966 aa23.59■■□□□ 1.37
FAM3A-212ENST00000434658 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
FAM3A-212ENST00000434658 EYA1Q99502 592 aa23.59■■□□□ 1.37
FAM3A-212ENST00000434658 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
FAM3A-212ENST00000434658 EXOC5O00471 708 aa23.58■■□□□ 1.37
FAM3A-212ENST00000434658 ALDH1L2Q3SY69 923 aa23.58■■□□□ 1.37
FAM3A-212ENST00000434658 KIF16BQ96L93 1317 aa23.58■■□□□ 1.36
FAM3A-212ENST00000434658 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
FAM3A-212ENST00000434658 ZNF428Q96B54 188 aa23.57■■□□□ 1.36
FAM3A-212ENST00000434658 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
FAM3A-212ENST00000434658 HMOX1P09601 288 aa23.56■■□□□ 1.36
FAM3A-212ENST00000434658 DDX19BQ9UMR2 479 aa23.56■■□□□ 1.36
FAM3A-212ENST00000434658 LRRC37A3O60309 1634 aa23.55■■□□□ 1.36
FAM3A-212ENST00000434658 UPF1Q92900 1129 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■■■□□ 18.4
FAM3A-212ENST00000434658 BRPF1P55201 1214 aaPredicted RBP23.54■■□□□ 1.36
FAM3A-212ENST00000434658 NOB1Q9ULX3 412 aaKnown RBP23.54■■□□□ 1.36
FAM3A-212ENST00000434658 IPO8O15397 1037 aaKnown RBP23.54■■□□□ 1.36
FAM3A-212ENST00000434658 RAPGEF4Q8WZA2 1011 aa23.54■■□□□ 1.36
FAM3A-212ENST00000434658 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
FAM3A-212ENST00000434658 TATP17735 454 aaPredicted RBP23.52■■□□□ 1.36
FAM3A-212ENST00000434658 MARCH10Q8NA82 808 aaPredicted RBP23.52■■□□□ 1.36
FAM3A-212ENST00000434658 IFT57Q9NWB7 429 aa23.52■■□□□ 1.36
FAM3A-212ENST00000434658 MEGF6O75095 1541 aa23.51■■□□□ 1.35
FAM3A-212ENST00000434658 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
FAM3A-212ENST00000434658 HDAC1Q13547 482 aaPredicted RBP23.51■■□□□ 1.35
FAM3A-212ENST00000434658 FAM196AQ6ZSG2 479 aa23.51■■□□□ 1.35
FAM3A-212ENST00000434658 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
FAM3A-212ENST00000434658 TNS2Q63HR2 1409 aa23.5■■□□□ 1.35
FAM3A-212ENST00000434658 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
FAM3A-212ENST00000434658 GNAI1P63096 354 aa23.5■■□□□ 1.35
FAM3A-212ENST00000434658 ITPRIPQ8IWB1 547 aa23.5■■□□□ 1.35
FAM3A-212ENST00000434658 ZNF853P0CG23 659 aa23.49■■□□□ 1.35
FAM3A-212ENST00000434658 RGPD1P0DJD0 1748 aa23.49■■□□□ 1.35
FAM3A-212ENST00000434658 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
FAM3A-212ENST00000434658 ZCRB1Q8TBF4 217 aaKnown RBP23.49■■□□□ 1.35
FAM3A-212ENST00000434658 TMEM57Q8N5G2 664 aa23.48■■□□□ 1.35
FAM3A-212ENST00000434658 OVOS2A0A0G2JMS6 1433 aa23.48■■□□□ 1.35
FAM3A-212ENST00000434658 DDX54Q8TDD1 881 aaKnown RBP23.47■■□□□ 1.35
FAM3A-212ENST00000434658 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
FAM3A-212ENST00000434658 ZBTB40Q9NUA8 1239 aa23.46■■□□□ 1.35
FAM3A-212ENST00000434658 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
FAM3A-212ENST00000434658 CCDC125Q86Z20 511 aa23.45■■□□□ 1.34
FAM3A-212ENST00000434658 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
FAM3A-212ENST00000434658 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
FAM3A-212ENST00000434658 VAMP4O75379 141 aa23.45■■□□□ 1.34
FAM3A-212ENST00000434658 ARHGAP45Q92619 1136 aa23.44■■□□□ 1.34
FAM3A-212ENST00000434658 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
FAM3A-212ENST00000434658 EP400Q96L91 3159 aa23.43■■□□□ 1.34
FAM3A-212ENST00000434658 TRIM37O94972 964 aa23.43■■□□□ 1.34
FAM3A-212ENST00000434658 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
FAM3A-212ENST00000434658 MBIPQ9NS73 344 aa23.43■■□□□ 1.34
FAM3A-212ENST00000434658 SF3B2Q13435 895 aaKnown RBP23.42■■□□□ 1.34
FAM3A-212ENST00000434658 SMC5Q8IY18 1101 aa23.42■■□□□ 1.34
FAM3A-212ENST00000434658 MRPL50Q8N5N7 158 aaKnown RBP23.42■■□□□ 1.34
FAM3A-212ENST00000434658 DEKP35659 375 aaKnown RBP23.41■■□□□ 1.34
FAM3A-212ENST00000434658 SPG7Q9UQ90 795 aa23.41■■□□□ 1.34
FAM3A-212ENST00000434658 SEC24BO95487 1268 aa23.4■■□□□ 1.34
FAM3A-212ENST00000434658 TSPYL6Q8N831 410 aa23.4■■□□□ 1.34
FAM3A-212ENST00000434658 KDRP35968 1356 aa23.39■■□□□ 1.34
FAM3A-212ENST00000434658 BCL9O00512 1426 aa23.39■■□□□ 1.34
FAM3A-212ENST00000434658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
FAM3A-212ENST00000434658 PCDH11XQ9BZA7 1347 aa23.39■■□□□ 1.33
FAM3A-212ENST00000434658 PCDH11YQ9BZA8 1340 aa23.39■■□□□ 1.33
FAM3A-212ENST00000434658 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.33
FAM3A-212ENST00000434658 SLC4A3P48751 1232 aa23.38■■□□□ 1.33
FAM3A-212ENST00000434658 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
FAM3A-212ENST00000434658 TWISTNBQ3B726 338 aaPredicted RBP23.37■■□□□ 1.33
FAM3A-212ENST00000434658 CYP27B1O15528 508 aa23.36■■□□□ 1.33
FAM3A-212ENST00000434658 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-212ENST00000434658 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
FAM3A-212ENST00000434658 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
FAM3A-212ENST00000434658 ABCC4O15439 1325 aa23.35■■□□□ 1.33
FAM3A-212ENST00000434658 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
FAM3A-212ENST00000434658 PLEKHG2Q9H7P9 1386 aa23.35■■□□□ 1.33
FAM3A-212ENST00000434658 SBF2Q86WG5 1849 aa23.35■■□□□ 1.33
FAM3A-212ENST00000434658 PTF1AQ7RTS3 328 aa23.34■■□□□ 1.33
FAM3A-212ENST00000434658 DEFB132Q7Z7B7 95 aa23.34■■□□□ 1.33
FAM3A-212ENST00000434658 BCL11BQ9C0K0 894 aaPredicted RBP23.34■■□□□ 1.33
FAM3A-212ENST00000434658 UPF2Q9HAU5 1272 aaKnown RBP23.34■■□□□ 1.33
FAM3A-212ENST00000434658 KCNQ2O43526 872 aa23.33■■□□□ 1.33
FAM3A-212ENST00000434658 APBA3O96018 575 aa23.33■■□□□ 1.33
FAM3A-212ENST00000434658 C8orf58Q8NAV2 365 aa23.33■■□□□ 1.33
FAM3A-212ENST00000434658 ZBTB7BO15156 539 aaPredicted RBP23.33■■□□□ 1.32
FAM3A-212ENST00000434658 BAG6P46379 1132 aa23.33■■□□□ 1.32
FAM3A-212ENST00000434658 IFNL2Q8IZJ0 200 aa23.33■■□□□ 1.32
FAM3A-212ENST00000434658 TNS1Q9HBL0 1735 aaKnown RBP23.31■■□□□ 1.32
FAM3A-212ENST00000434658 PHKG2P15735 406 aa23.31■■□□□ 1.32
FAM3A-212ENST00000434658 TBC1D32Q96NH3 1257 aa23.31■■□□□ 1.32
FAM3A-212ENST00000434658 NUCB1Q02818 461 aa23.31■■□□□ 1.32
FAM3A-212ENST00000434658 ELL2O00472 640 aaPredicted RBP23.3■■□□□ 1.32
FAM3A-212ENST00000434658 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
FAM3A-212ENST00000434658 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
FAM3A-212ENST00000434658 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
FAM3A-212ENST00000434658 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
FAM3A-212ENST00000434658 EN1Q05925 392 aaPredicted RBP23.29■■□□□ 1.32
FAM3A-212ENST00000434658 NKX1-1Q15270 411 aaPredicted RBP23.29■■□□□ 1.32
FAM3A-212ENST00000434658 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
FAM3A-212ENST00000434658 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms