RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 CABP4P57796 275 aa30.24■■■□□ 2.43
SMARCAL1-208ENST00000434435 LAS1LQ9Y4W2 734 aaKnown RBP30.24■■■□□ 2.43
SMARCAL1-208ENST00000434435 TAF7Q15545 349 aaPredicted RBP30.23■■■□□ 2.43
SMARCAL1-208ENST00000434435 CDCA7LQ96GN5 454 aa30.23■■■□□ 2.43
SMARCAL1-208ENST00000434435 CFAP44Q96MT7 982 aa30.23■■■□□ 2.43
SMARCAL1-208ENST00000434435 SLFN5Q08AF3 891 aa30.22■■■□□ 2.43
SMARCAL1-208ENST00000434435 MYH16Q9H6N6 1097 aa30.22■■■□□ 2.43
SMARCAL1-208ENST00000434435 SPINK5Q9NQ38 1064 aaPredicted RBP30.21■■■□□ 2.43
SMARCAL1-208ENST00000434435 ZNF853P0CG23 659 aa30.2■■■□□ 2.43
SMARCAL1-208ENST00000434435 BABAM1Q9NWV8 329 aa30.2■■■□□ 2.43
SMARCAL1-208ENST00000434435 TMOD3Q9NYL9 352 aa30.2■■■□□ 2.43
SMARCAL1-208ENST00000434435 UBR2Q8IWV8 1755 aa30.19■■■□□ 2.42
SMARCAL1-208ENST00000434435 NFATC2IPQ8NCF5 419 aa30.19■■■□□ 2.42
SMARCAL1-208ENST00000434435 BTAF1O14981 1849 aa30.19■■■□□ 2.42
SMARCAL1-208ENST00000434435 FAM182BQ5T319 152 aa30.18■■■□□ 2.42
SMARCAL1-208ENST00000434435 TSPYL4Q9UJ04 414 aa30.18■■■□□ 2.42
SMARCAL1-208ENST00000434435 CHL1O00533 1208 aa30.17■■■□□ 2.42
SMARCAL1-208ENST00000434435 ACSBG1Q96GR2 724 aa30.17■■■□□ 2.42
SMARCAL1-208ENST00000434435 FANCIQ9NVI1 1328 aa30.17■■■□□ 2.42
SMARCAL1-208ENST00000434435 BTBD11A6QL63 1104 aa30.16■■■□□ 2.42
SMARCAL1-208ENST00000434435 SYTL4Q96C24 671 aaPredicted RBP30.16■■■□□ 2.42
SMARCAL1-208ENST00000434435 MBIPQ9NS73 344 aa30.16■■■□□ 2.42
SMARCAL1-208ENST00000434435 PRIM1P49642 420 aaKnown RBP30.15■■■□□ 2.42
SMARCAL1-208ENST00000434435 FAM196AQ6ZSG2 479 aa30.15■■■□□ 2.42
SMARCAL1-208ENST00000434435 TRMT2AQ8IZ69 625 aaKnown RBP30.15■■■□□ 2.42
SMARCAL1-208ENST00000434435 TSR2Q969E8 191 aaKnown RBP30.15■■■□□ 2.42
SMARCAL1-208ENST00000434435 DUSP27Q5VZP5 1158 aa30.14■■■□□ 2.42
SMARCAL1-208ENST00000434435 MIS18AQ9NYP9 233 aa30.14■■■□□ 2.42
SMARCAL1-208ENST00000434435 PIGBQ92521 554 aa30.12■■■□□ 2.41
SMARCAL1-208ENST00000434435 TTC5Q8N0Z6 440 aa30.09■■■□□ 2.41
SMARCAL1-208ENST00000434435 ZNF790Q6PG37 636 aa30.08■■■□□ 2.41
SMARCAL1-208ENST00000434435 KCPQ6ZWJ8 1503 aa30.07■■■□□ 2.4
SMARCAL1-208ENST00000434435 KCNQ2O43526 872 aa30.07■■■□□ 2.4
SMARCAL1-208ENST00000434435 SLC39A6Q13433 755 aa30.07■■■□□ 2.4
SMARCAL1-208ENST00000434435 LAMB4A4D0S4 1761 aa30.07■■■□□ 2.4
SMARCAL1-208ENST00000434435 C5P01031 1676 aa30.07■■■□□ 2.4
SMARCAL1-208ENST00000434435 TNS1Q9HBL0 1735 aaKnown RBP30.06■■■□□ 2.4
SMARCAL1-208ENST00000434435 KCNQ3O43525 872 aa30.05■■■□□ 2.4
SMARCAL1-208ENST00000434435 EXOSC9Q06265 439 aaKnown RBP30.04■■■□□ 2.4
SMARCAL1-208ENST00000434435 LY75O60449 1722 aa30.03■■■□□ 2.4
SMARCAL1-208ENST00000434435 EIF4A1P60842 406 aaKnown RBP30.03■■■□□ 2.4
SMARCAL1-208ENST00000434435 CENPBP07199 599 aaPredicted RBP30.02■■■□□ 2.4
SMARCAL1-208ENST00000434435 BCL11BQ9C0K0 894 aaPredicted RBP30.02■■■□□ 2.4
SMARCAL1-208ENST00000434435 ATG3Q9NT62 314 aa30.02■■■□□ 2.4
SMARCAL1-208ENST00000434435 ASAP1Q9ULH1 1129 aa30.02■■■□□ 2.4
SMARCAL1-208ENST00000434435 ZNF831Q5JPB2 1677 aa30.01■■■□□ 2.39
SMARCAL1-208ENST00000434435 CICQ96RK0 1608 aaPredicted RBP30■■■□□ 2.39
SMARCAL1-208ENST00000434435 SMARCC1Q92922 1105 aaPredicted RBP30■■■□□ 2.39
SMARCAL1-208ENST00000434435 FMNL2Q96PY5 1086 aa30■■■□□ 2.39
SMARCAL1-208ENST00000434435 CACNA1FO60840 1977 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 TRIM37O94972 964 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 PTF1AQ7RTS3 328 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 ZNF496Q96IT1 587 aaPredicted RBP29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 TJP1Q07157 1748 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 PALLDQ8WX93 1383 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 HEG1Q9ULI3 1381 aa29.98■■■□□ 2.39
SMARCAL1-208ENST00000434435 SOS1Q07889 1333 aaPredicted RBP29.97■■■□□ 2.39
SMARCAL1-208ENST00000434435 CT47B1P0C2W7 299 aaPredicted RBP29.97■■■□□ 2.39
SMARCAL1-208ENST00000434435 KRT24Q2M2I5 525 aa29.97■■■□□ 2.39
SMARCAL1-208ENST00000434435 TWISTNBQ3B726 338 aaPredicted RBP29.97■■■□□ 2.39
SMARCAL1-208ENST00000434435 C8orf58Q8NAV2 365 aa29.97■■■□□ 2.39
SMARCAL1-208ENST00000434435 EP400Q96L91 3159 aa29.96■■■□□ 2.39
SMARCAL1-208ENST00000434435 RGPD3A6NKT7 1758 aaPredicted RBP29.96■■■□□ 2.39
SMARCAL1-208ENST00000434435 RGPD4Q7Z3J3 1758 aa29.96■■■□□ 2.39
SMARCAL1-208ENST00000434435 PTCD1O75127 700 aaKnown RBP29.95■■■□□ 2.39
SMARCAL1-208ENST00000434435 TSPYL6Q8N831 410 aa29.95■■■□□ 2.39
SMARCAL1-208ENST00000434435 HOXB7P09629 217 aa29.94■■■□□ 2.38
SMARCAL1-208ENST00000434435 ELL2O00472 640 aaPredicted RBP29.93■■■□□ 2.38
SMARCAL1-208ENST00000434435 RBM42Q9BTD8 480 aaKnown RBP29.93■■■□□ 2.38
SMARCAL1-208ENST00000434435 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
SMARCAL1-208ENST00000434435 GIGYF1O75420 1035 aaPredicted RBP29.92■■■□□ 2.38
SMARCAL1-208ENST00000434435 COL5A3P25940 1745 aaPredicted RBP29.92■■■□□ 2.38
SMARCAL1-208ENST00000434435 VAMP4O75379 141 aa29.91■■■□□ 2.38
SMARCAL1-208ENST00000434435 SNRPA1P09661 255 aaKnown RBP29.91■■■□□ 2.38
SMARCAL1-208ENST00000434435 VSIG10Q8N0Z9 540 aa29.91■■■□□ 2.38
SMARCAL1-208ENST00000434435 ZNF428Q96B54 188 aa29.89■■■□□ 2.38
SMARCAL1-208ENST00000434435 LOC102724428A0A0B4J2F2 783 aa29.88■■■□□ 2.37
SMARCAL1-208ENST00000434435 SIK1P57059 783 aa29.88■■■□□ 2.37
SMARCAL1-208ENST00000434435 CHMP4AQ9BY43 222 aa29.87■■■□□ 2.37
SMARCAL1-208ENST00000434435 RCAN3Q9UKA8 241 aa29.86■■■□□ 2.37
SMARCAL1-208ENST00000434435 PRAMEF22A3QJZ6 481 aa29.85■■■□□ 2.37
SMARCAL1-208ENST00000434435 HDGFL1Q5TGJ6 251 aa29.85■■■□□ 2.37
SMARCAL1-208ENST00000434435 TEX13AQ9BXU3 409 aaPredicted RBP29.85■■■□□ 2.37
SMARCAL1-208ENST00000434435 SLC4A9Q96Q91 983 aa29.84■■■□□ 2.37
SMARCAL1-208ENST00000434435 RREB1Q92766 1687 aa29.83■■■□□ 2.37
SMARCAL1-208ENST00000434435 APBA3O96018 575 aa29.83■■■□□ 2.37
SMARCAL1-208ENST00000434435 EIF2S2P20042 333 aaKnown RBP29.83■■■□□ 2.37
SMARCAL1-208ENST00000434435 ATP6V1AP38606 617 aa29.83■■■□□ 2.37
SMARCAL1-208ENST00000434435 CCDC30Q5VVM6 783 aa29.83■■■□□ 2.37
SMARCAL1-208ENST00000434435 ALDH1L2Q3SY69 923 aa29.82■■■□□ 2.36
SMARCAL1-208ENST00000434435 DNAJC10Q8IXB1 793 aa29.82■■■□□ 2.36
SMARCAL1-208ENST00000434435 RARSP54136 660 aaKnown RBP29.81■■■□□ 2.36
SMARCAL1-208ENST00000434435 USP16Q9Y5T5 823 aa29.81■■■□□ 2.36
SMARCAL1-208ENST00000434435 PLSCR1O15162 318 aa29.8■■■□□ 2.36
SMARCAL1-208ENST00000434435 SF3B2Q13435 895 aaKnown RBP29.8■■■□□ 2.36
SMARCAL1-208ENST00000434435 NECTIN2Q92692 538 aa29.8■■■□□ 2.36
SMARCAL1-208ENST00000434435 CCNL1Q9UK58 526 aaPredicted RBP29.8■■■□□ 2.36
SMARCAL1-208ENST00000434435 MYH14Q7Z406 1995 aaKnown RBP29.79■■■□□ 2.36
SMARCAL1-208ENST00000434435 STARD3NLO95772 234 aa29.79■■■□□ 2.36
SMARCAL1-208ENST00000434435 STK31Q9BXU1 1019 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms