RNA–Protein interactions for RNA: ENST00000434205.7

TSEN54-202, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-202ENST00000434205 LOC102724428A0A0B4J2F2 783 aa22.11■■□□□ 1.13
TSEN54-202ENST00000434205 SIK1P57059 783 aa22.11■■□□□ 1.13
TSEN54-202ENST00000434205 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
TSEN54-202ENST00000434205 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
TSEN54-202ENST00000434205 HMGB2P26583 209 aaKnown RBP22.1■■□□□ 1.13
TSEN54-202ENST00000434205 SPON1Q9HCB6 807 aa22.1■■□□□ 1.13
TSEN54-202ENST00000434205 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
TSEN54-202ENST00000434205 PNPLA7Q6ZV29 1317 aa22.09■■□□□ 1.13
TSEN54-202ENST00000434205 UBR3Q6ZT12 1888 aa22.09■■□□□ 1.13
TSEN54-202ENST00000434205 RNMTO43148 476 aaKnown RBP22.09■■□□□ 1.13
TSEN54-202ENST00000434205 FCHSD2O94868 740 aa22.09■■□□□ 1.13
TSEN54-202ENST00000434205 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
TSEN54-202ENST00000434205 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
TSEN54-202ENST00000434205 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
TSEN54-202ENST00000434205 SLC52A2Q9HAB3 445 aa22.08■■□□□ 1.13
TSEN54-202ENST00000434205 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.13
TSEN54-202ENST00000434205 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
TSEN54-202ENST00000434205 TJP1Q07157 1748 aa22.07■■□□□ 1.12
TSEN54-202ENST00000434205 ZBTB7AO95365 584 aa22.07■■□□□ 1.12
TSEN54-202ENST00000434205 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-202ENST00000434205 GNAT3A8MTJ3 354 aa22.06■■□□□ 1.12
TSEN54-202ENST00000434205 ITPK1Q13572 414 aa22.06■■□□□ 1.12
TSEN54-202ENST00000434205 MTFR1LQ9H019 292 aa22.06■■□□□ 1.12
TSEN54-202ENST00000434205 UBR2Q8IWV8 1755 aa22.06■■□□□ 1.12
TSEN54-202ENST00000434205 ATP6V1AP38606 617 aa22.05■■□□□ 1.12
TSEN54-202ENST00000434205 LINC00116Q8NCU8 138 aa22.05■■□□□ 1.12
TSEN54-202ENST00000434205 SLC4A9Q96Q91 983 aa22.04■■□□□ 1.12
TSEN54-202ENST00000434205 RBM42Q9BTD8 480 aaKnown RBP22.04■■□□□ 1.12
TSEN54-202ENST00000434205 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-202ENST00000434205 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
TSEN54-202ENST00000434205 CEMIPQ8WUJ3 1361 aa22.03■■□□□ 1.12
TSEN54-202ENST00000434205 AK7Q96M32 723 aa22.03■■□□□ 1.12
TSEN54-202ENST00000434205 DLG5Q8TDM6 1919 aa22.02■■□□□ 1.12
TSEN54-202ENST00000434205 PTGER2P43116 358 aa22.02■■□□□ 1.12
TSEN54-202ENST00000434205 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
TSEN54-202ENST00000434205 IL17REQ8NFR9 667 aa22.01■■□□□ 1.11
TSEN54-202ENST00000434205 ATF5Q9Y2D1 282 aaPredicted RBP22.01■■□□□ 1.11
TSEN54-202ENST00000434205 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
TSEN54-202ENST00000434205 SGIP1Q9BQI5 828 aa22■■□□□ 1.11
TSEN54-202ENST00000434205 COL23A1Q86Y22 540 aaPredicted RBP21.99■■□□□ 1.11
TSEN54-202ENST00000434205 FLAD1Q8NFF5 587 aa21.99■■□□□ 1.11
TSEN54-202ENST00000434205 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
TSEN54-202ENST00000434205 PPP1R1BQ9UD71 204 aaPredicted RBP21.99■■□□□ 1.11
TSEN54-202ENST00000434205 NEFMP07197 916 aa21.98■■□□□ 1.11
TSEN54-202ENST00000434205 TEFQ10587 303 aa21.98■■□□□ 1.11
TSEN54-202ENST00000434205 AMIGO3Q86WK7 504 aa21.98■■□□□ 1.11
TSEN54-202ENST00000434205 CNTNAP4Q9C0A0 1308 aa21.98■■□□□ 1.11
TSEN54-202ENST00000434205 SSFA2P28290 1259 aa21.97■■□□□ 1.11
TSEN54-202ENST00000434205 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
TSEN54-202ENST00000434205 MYH14Q7Z406 1995 aaKnown RBP21.97■■□□□ 1.11
TSEN54-202ENST00000434205 GNPATO15228 680 aa21.96■■□□□ 1.11
TSEN54-202ENST00000434205 MSH5O43196 834 aa21.96■■□□□ 1.11
TSEN54-202ENST00000434205 PNNQ9H307 717 aaKnown RBP21.96■■□□□ 1.11
TSEN54-202ENST00000434205 C4AP0C0L4 1744 aa21.95■■□□□ 1.1
TSEN54-202ENST00000434205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.95■■□□□ 1.1
TSEN54-202ENST00000434205 PHF14O94880 888 aa21.95■■□□□ 1.1
TSEN54-202ENST00000434205 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
TSEN54-202ENST00000434205 MAPK8IP3Q9UPT6 1336 aa21.95■■□□□ 1.1
TSEN54-202ENST00000434205 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
TSEN54-202ENST00000434205 RC3H1Q5TC82 1133 aaKnown RBP21.94■■□□□ 1.1
TSEN54-202ENST00000434205 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
TSEN54-202ENST00000434205 MCM10Q7L590 875 aa21.93■■□□□ 1.1
TSEN54-202ENST00000434205 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
TSEN54-202ENST00000434205 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
TSEN54-202ENST00000434205 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
TSEN54-202ENST00000434205 RTCBQ9Y3I0 505 aaKnown RBP21.91■■□□□ 1.1
TSEN54-202ENST00000434205 POLD1P28340 1107 aa21.9■■□□□ 1.1
TSEN54-202ENST00000434205 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
TSEN54-202ENST00000434205 DCTN1Q14203 1278 aa21.9■■□□□ 1.1
TSEN54-202ENST00000434205 WDR43Q15061 677 aaKnown RBP eCLIP21.9■■□□□ 1.1
TSEN54-202ENST00000434205 DNAJC10Q8IXB1 793 aa21.9■■□□□ 1.1
TSEN54-202ENST00000434205 VSIG10Q8N0Z9 540 aa21.9■■□□□ 1.1
TSEN54-202ENST00000434205 ARXQ96QS3 562 aa21.9■■□□□ 1.1
TSEN54-202ENST00000434205 MSL1Q68DK7 614 aa21.89■■□□□ 1.09
TSEN54-202ENST00000434205 KDM3BQ7LBC6 1761 aa21.89■■□□□ 1.09
TSEN54-202ENST00000434205 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
TSEN54-202ENST00000434205 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
TSEN54-202ENST00000434205 RPS6KA4O75676 772 aa21.88■■□□□ 1.09
TSEN54-202ENST00000434205 ADRA2BP18089 450 aa21.88■■□□□ 1.09
TSEN54-202ENST00000434205 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
TSEN54-202ENST00000434205 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
TSEN54-202ENST00000434205 INTS5Q6P9B9 1019 aaKnown RBP21.86■■□□□ 1.09
TSEN54-202ENST00000434205 FHDC1Q9C0D6 1143 aaPredicted RBP21.86■■□□□ 1.09
TSEN54-202ENST00000434205 CCDC87Q9NVE4 849 aa21.86■■□□□ 1.09
TSEN54-202ENST00000434205 TRAPPC3LQ5T215 181 aa21.85■■□□□ 1.09
TSEN54-202ENST00000434205 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
TSEN54-202ENST00000434205 KCNQ3O43525 872 aa21.84■■□□□ 1.09
TSEN54-202ENST00000434205 CCDC146Q8IYE0 955 aa21.84■■□□□ 1.09
TSEN54-202ENST00000434205 ARHGEF1Q92888 912 aaKnown RBP21.84■■□□□ 1.09
TSEN54-202ENST00000434205 ADAMTS8Q9UP79 889 aa21.84■■□□□ 1.09
TSEN54-202ENST00000434205 LAMB4A4D0S4 1761 aa21.84■■□□□ 1.09
TSEN54-202ENST00000434205 RUNDC1Q96C34 613 aa21.83■■□□□ 1.09
TSEN54-202ENST00000434205 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
TSEN54-202ENST00000434205 ANP32CO43423 234 aa21.82■■□□□ 1.08
TSEN54-202ENST00000434205 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
TSEN54-202ENST00000434205 TAF7Q15545 349 aaPredicted RBP21.82■■□□□ 1.08
TSEN54-202ENST00000434205 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
TSEN54-202ENST00000434205 ZBTB1Q9Y2K1 713 aa21.82■■□□□ 1.08
TSEN54-202ENST00000434205 RFC4P35249 363 aa21.81■■□□□ 1.08
TSEN54-202ENST00000434205 RIPK4P57078 832 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms