RNA–Protein interactions for RNA: ENST00000433669.1

LINC00954-201, long intergenic non-protein coding RNA 954, humanhuman

TSL 2 BASIC

Gene LINC00954, Length 2,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-201ENST00000433669 RGPD5Q99666 1765 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
LINC00954-201ENST00000433669 KCNQ3O43525 872 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 BECN1Q14457 450 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
LINC00954-201ENST00000433669 EIF4A1P60842 406 aaKnown RBP15.23■□□□□ 0.03
LINC00954-201ENST00000433669 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
LINC00954-201ENST00000433669 PHAXQ9H814 394 aaKnown RBP15.22■□□□□ 0.03
LINC00954-201ENST00000433669 NLRP2Q9NX02 1062 aa15.22■□□□□ 0.03
LINC00954-201ENST00000433669 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
LINC00954-201ENST00000433669 ERBB3P21860 1342 aa15.22■□□□□ 0.03
LINC00954-201ENST00000433669 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
LINC00954-201ENST00000433669 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
LINC00954-201ENST00000433669 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
LINC00954-201ENST00000433669 HMMRO75330 724 aa15.21■□□□□ 0.02
LINC00954-201ENST00000433669 GNAI2P04899 355 aa15.21■□□□□ 0.02
LINC00954-201ENST00000433669 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
LINC00954-201ENST00000433669 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 ALS2Q96Q42 1657 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 PXDNQ92626 1479 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 CHRNA2Q15822 529 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 RAPGEF4Q8WZA2 1011 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 DCCP43146 1447 aa15.2■□□□□ 0.02
LINC00954-201ENST00000433669 MED1Q15648 1581 aaPredicted RBP15.2■□□□□ 0.02
LINC00954-201ENST00000433669 GNAI3P08754 354 aa15.19■□□□□ 0.02
LINC00954-201ENST00000433669 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
LINC00954-201ENST00000433669 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
LINC00954-201ENST00000433669 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
LINC00954-201ENST00000433669 ANXA1P04083 346 aa15.18■□□□□ 0.02
LINC00954-201ENST00000433669 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
LINC00954-201ENST00000433669 HOXB7P09629 217 aa15.17■□□□□ 0.02
LINC00954-201ENST00000433669 OTUD7AQ8TE49 926 aaPredicted RBP15.17■□□□□ 0.02
LINC00954-201ENST00000433669 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
LINC00954-201ENST00000433669 GSPT1P15170 499 aaKnown RBP15.16■□□□□ 0.02
LINC00954-201ENST00000433669 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
LINC00954-201ENST00000433669 KDM3BQ7LBC6 1761 aa15.16■□□□□ 0.02
LINC00954-201ENST00000433669 TATP17735 454 aaPredicted RBP15.16■□□□□ 0.02
LINC00954-201ENST00000433669 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
LINC00954-201ENST00000433669 SLKQ9H2G2 1235 aaPredicted RBP15.16■□□□□ 0.02
LINC00954-201ENST00000433669 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
LINC00954-201ENST00000433669 LRRFIP2Q9Y608 721 aaKnown RBP15.16■□□□□ 0.02
LINC00954-201ENST00000433669 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
LINC00954-201ENST00000433669 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 USP44Q9H0E7 712 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 SPATA31A3Q5VYP0 1347 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 PI4KAP2A4QPH2 592 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 TTC22Q5TAA0 569 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 PI4KAP1Q8N8J0 262 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
LINC00954-201ENST00000433669 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 BRINP3Q76B58 766 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 CDC45O75419 566 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 GIGYF1O75420 1035 aaPredicted RBP15.14■□□□□ 0.01
LINC00954-201ENST00000433669 ATP8B2P98198 1209 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
LINC00954-201ENST00000433669 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
LINC00954-201ENST00000433669 DBF4Q9UBU7 674 aaPredicted RBP15.14■□□□□ 0.01
LINC00954-201ENST00000433669 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
LINC00954-201ENST00000433669 CAMTA1Q9Y6Y1 1673 aa15.13■□□□□ 0.01
LINC00954-201ENST00000433669 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
LINC00954-201ENST00000433669 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
LINC00954-201ENST00000433669 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
LINC00954-201ENST00000433669 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
LINC00954-201ENST00000433669 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
LINC00954-201ENST00000433669 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
LINC00954-201ENST00000433669 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
LINC00954-201ENST00000433669 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
LINC00954-201ENST00000433669 XIRP1Q702N8 1843 aaKnown RBP15.11■□□□□ 0.01
LINC00954-201ENST00000433669 OVOS2A0A0G2JMS6 1433 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 PHKG2P15735 406 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 PROSER3Q2NL68 480 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
LINC00954-201ENST00000433669 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 SLC52A2Q9HAB3 445 aa15.1■□□□□ 0.01
LINC00954-201ENST00000433669 NBPF7P0C2Y1 421 aaPredicted RBP15.09■□□□□ 0.01
LINC00954-201ENST00000433669 BEND3Q5T5X7 828 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 COL18A1P39060 1754 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 MEGF6O75095 1541 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 SDSP20132 328 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
LINC00954-201ENST00000433669 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0.01
LINC00954-201ENST00000433669 HSCBQ8IWL3 235 aa15.08■□□□□ 0.01
LINC00954-201ENST00000433669 PRDM11Q9NQV5 511 aa15.08■□□□□ 0.01
LINC00954-201ENST00000433669 MAP3K2Q9Y2U5 619 aa15.08■□□□□ 0.01
LINC00954-201ENST00000433669 STRCQ7RTU9 1775 aa15.08■□□□□ 0.01
LINC00954-201ENST00000433669 PDE1AP54750 535 aa15.08■□□□□ 0
LINC00954-201ENST00000433669 PPP1R42Q7Z4L9 355 aa15.08■□□□□ 0
LINC00954-201ENST00000433669 ADCY9O60503 1353 aa15.08■□□□□ 0
LINC00954-201ENST00000433669 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
LINC00954-201ENST00000433669 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
LINC00954-201ENST00000433669 CASC1Q6TDU7 716 aa15.07■□□□□ 0
LINC00954-201ENST00000433669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms