RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 PTPN14Q15678 1187 aa12□□□□□ -0.49
LINC00494-203ENST00000433094 NEK11Q8NG66 645 aa12□□□□□ -0.49
LINC00494-203ENST00000433094 PTPRTO14522 1441 aa11.99□□□□□ -0.49
LINC00494-203ENST00000433094 VAMP4O75379 141 aa11.99□□□□□ -0.49
LINC00494-203ENST00000433094 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
LINC00494-203ENST00000433094 CACTINQ8WUQ7 758 aaKnown RBP11.99□□□□□ -0.49
LINC00494-203ENST00000433094 C10orf67Q8IYJ2 551 aa11.99□□□□□ -0.49
LINC00494-203ENST00000433094 GEMIN8Q9NWZ8 242 aaKnown RBP11.99□□□□□ -0.49
LINC00494-203ENST00000433094 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
LINC00494-203ENST00000433094 GTF2A1P52655 376 aaPredicted RBP11.98□□□□□ -0.49
LINC00494-203ENST00000433094 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
LINC00494-203ENST00000433094 SLU7O95391 586 aaKnown RBP11.98□□□□□ -0.49
LINC00494-203ENST00000433094 SYT10Q6XYQ8 523 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 ANO2Q9NQ90 1003 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 ABCC4O15439 1325 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 PIK3R4Q99570 1358 aa11.98□□□□□ -0.49
LINC00494-203ENST00000433094 POLR3GO15318 223 aaPredicted RBP11.97□□□□□ -0.49
LINC00494-203ENST00000433094 DHX16O60231 1041 aaKnown RBP11.97□□□□□ -0.49
LINC00494-203ENST00000433094 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 TSPYL6Q8N831 410 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 STX6O43752 255 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 NOP2P46087 812 aaKnown RBP11.97□□□□□ -0.49
LINC00494-203ENST00000433094 ZNF75DP51815 510 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 CLIP2Q9UDT6 1046 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 ANAPC15P60006 121 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 FHOD1Q9Y613 1164 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
LINC00494-203ENST00000433094 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 USP27XA6NNY8 438 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 TRIM66O15016 1216 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 SYT1P21579 422 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 TYRO3Q06418 890 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 CAMK4Q16566 473 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 RNF20Q5VTR2 975 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 API5Q9BZZ5 524 aaKnown RBP11.96□□□□□ -0.49
LINC00494-203ENST00000433094 UHRF1BP1LA0JNW5 1464 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 UNC13BO14795 1591 aa11.96□□□□□ -0.49
LINC00494-203ENST00000433094 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 MYO1CO00159 1063 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 SOX12O15370 315 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.5
LINC00494-203ENST00000433094 MAP3K11Q16584 847 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 MUM1L1Q5H9M0 696 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 JPH4Q96JJ6 628 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 CBX8Q9HC52 389 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 TRMT1Q9NXH9 659 aaKnown RBP11.96□□□□□ -0.5
LINC00494-203ENST00000433094 MRVI1Q9Y6F6 885 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 ADAMTS12P58397 1594 aa11.96□□□□□ -0.5
LINC00494-203ENST00000433094 F13A1P00488 732 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 DNM1Q05193 864 aaKnown RBP11.95□□□□□ -0.5
LINC00494-203ENST00000433094 ERCC6LQ2NKX8 1250 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 ESYT1Q9BSJ8 1104 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 PNMA6AP0CW24 399 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-203ENST00000433094 TPM4P67936 248 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-203ENST00000433094 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 H2AFXP16104 143 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-203ENST00000433094 CASQ1P31415 396 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 PLA2G4AP47712 749 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 CLCN6P51797 869 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 GYS2P54840 703 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 CCDC144BQ3MJ40 725 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 CTR9Q6PD62 1173 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 HDAC5Q9UQL6 1122 aa11.95□□□□□ -0.5
LINC00494-203ENST00000433094 IQGAP3Q86VI3 1631 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 RGS12O14924 1447 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 GPS2Q13227 327 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 MLECQ14165 292 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 ANO6Q4KMQ2 910 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-203ENST00000433094 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
LINC00494-203ENST00000433094 PTPRCP08575 1304 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 MMP14P50281 582 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 ICE2Q659A1 982 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
LINC00494-203ENST00000433094 ADGRF5Q8IZF2 1346 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 APPP05067 770 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 SKILP12757 684 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 PDE1AP54750 535 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 ZSCAN26Q16670 478 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 LRRC8AQ8IWT6 810 aa11.93□□□□□ -0.5
LINC00494-203ENST00000433094 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms