RNA–Protein interactions for RNA: ENST00000433061.1

LINC01278-201, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 3 BASIC

Gene LINC01278, Length 529 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-201ENST00000433061 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
LINC01278-201ENST00000433061 HOXC9P31274 260 aa17.94■□□□□ 0.46
LINC01278-201ENST00000433061 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
LINC01278-201ENST00000433061 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 SIK1P57059 783 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
LINC01278-201ENST00000433061 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
LINC01278-201ENST00000433061 LBX1P52954 281 aa17.92■□□□□ 0.46
LINC01278-201ENST00000433061 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
LINC01278-201ENST00000433061 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
LINC01278-201ENST00000433061 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
LINC01278-201ENST00000433061 CCDC85CA6NKD9 419 aa17.91■□□□□ 0.46
LINC01278-201ENST00000433061 RASSF7Q02833 373 aa17.91■□□□□ 0.46
LINC01278-201ENST00000433061 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
LINC01278-201ENST00000433061 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
LINC01278-201ENST00000433061 PIGBQ92521 554 aa17.91■□□□□ 0.46
LINC01278-201ENST00000433061 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
LINC01278-201ENST00000433061 RGPD2P0DJD1 1756 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 GLTPD2A6NH11 291 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 FBLN1P23142 703 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 ATP6V1AP38606 617 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 ITPK1Q13572 414 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
LINC01278-201ENST00000433061 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
LINC01278-201ENST00000433061 BRCA1P38398 1863 aaKnown RBP17.88■□□□□ 0.45
LINC01278-201ENST00000433061 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
LINC01278-201ENST00000433061 CYP27B1O15528 508 aa17.87■□□□□ 0.45
LINC01278-201ENST00000433061 CHRNA5P30532 468 aa17.87■□□□□ 0.45
LINC01278-201ENST00000433061 ZC3H4Q9UPT8 1303 aaKnown RBP17.87■□□□□ 0.45
LINC01278-201ENST00000433061 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
LINC01278-201ENST00000433061 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
LINC01278-201ENST00000433061 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
LINC01278-201ENST00000433061 GYS1P13807 737 aa17.85■□□□□ 0.45
LINC01278-201ENST00000433061 RFC4P35249 363 aa17.85■□□□□ 0.45
LINC01278-201ENST00000433061 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
LINC01278-201ENST00000433061 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
LINC01278-201ENST00000433061 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
LINC01278-201ENST00000433061 LMNB1P20700 586 aa17.84■□□□□ 0.45
LINC01278-201ENST00000433061 COG3Q96JB2 828 aa17.84■□□□□ 0.45
LINC01278-201ENST00000433061 SLC12A5Q9H2X9 1139 aa17.84■□□□□ 0.45
LINC01278-201ENST00000433061 SBF1O95248 1867 aa17.84■□□□□ 0.45
LINC01278-201ENST00000433061 VEGFBP49765 207 aa17.83■□□□□ 0.44
LINC01278-201ENST00000433061 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
LINC01278-201ENST00000433061 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
LINC01278-201ENST00000433061 ITGB4P16144 1822 aa17.82■□□□□ 0.44
LINC01278-201ENST00000433061 POTECB2RU33 542 aa17.82■□□□□ 0.44
LINC01278-201ENST00000433061 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
LINC01278-201ENST00000433061 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
LINC01278-201ENST00000433061 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
LINC01278-201ENST00000433061 RGS19P49795 217 aa17.81■□□□□ 0.44
LINC01278-201ENST00000433061 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
LINC01278-201ENST00000433061 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
LINC01278-201ENST00000433061 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
LINC01278-201ENST00000433061 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
LINC01278-201ENST00000433061 DPY19L2Q6NUT2 758 aa17.79■□□□□ 0.44
LINC01278-201ENST00000433061 KDM6AO15550 1401 aaPredicted RBP17.79■□□□□ 0.44
LINC01278-201ENST00000433061 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
LINC01278-201ENST00000433061 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
LINC01278-201ENST00000433061 POTEJP0CG39 1038 aa17.78■□□□□ 0.44
LINC01278-201ENST00000433061 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
LINC01278-201ENST00000433061 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
LINC01278-201ENST00000433061 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
LINC01278-201ENST00000433061 DDR1Q08345 913 aa17.76■□□□□ 0.43
LINC01278-201ENST00000433061 RTL1A6NKG5 1358 aa17.76■□□□□ 0.43
LINC01278-201ENST00000433061 FKBP8Q14318 412 aa17.75■□□□□ 0.43
LINC01278-201ENST00000433061 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
LINC01278-201ENST00000433061 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
LINC01278-201ENST00000433061 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
LINC01278-201ENST00000433061 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
LINC01278-201ENST00000433061 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
LINC01278-201ENST00000433061 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
LINC01278-201ENST00000433061 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
LINC01278-201ENST00000433061 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
LINC01278-201ENST00000433061 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
LINC01278-201ENST00000433061 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
LINC01278-201ENST00000433061 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
LINC01278-201ENST00000433061 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
LINC01278-201ENST00000433061 NFKBIEO00221 500 aa17.7■□□□□ 0.42
LINC01278-201ENST00000433061 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
LINC01278-201ENST00000433061 KDRP35968 1356 aa17.69■□□□□ 0.42
LINC01278-201ENST00000433061 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
LINC01278-201ENST00000433061 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
LINC01278-201ENST00000433061 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
LINC01278-201ENST00000433061 DDNO94850 711 aaPredicted RBP17.68■□□□□ 0.42
LINC01278-201ENST00000433061 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
LINC01278-201ENST00000433061 TNRC18O15417 2968 aaPredicted RBP17.68■□□□□ 0.42
LINC01278-201ENST00000433061 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
LINC01278-201ENST00000433061 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
LINC01278-201ENST00000433061 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
LINC01278-201ENST00000433061 INSRP06213 1382 aa17.66■□□□□ 0.42
LINC01278-201ENST00000433061 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
LINC01278-201ENST00000433061 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
LINC01278-201ENST00000433061 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
LINC01278-201ENST00000433061 CCDC88AQ3V6T2 1871 aa17.66■□□□□ 0.42
LINC01278-201ENST00000433061 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
LINC01278-201ENST00000433061 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms