RNA–Protein interactions for RNA: ENST00000432827.1

LCNL1-202, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-202ENST00000432827 PRDM11Q9NQV5 511 aa32.93■■■□□ 2.86
LCNL1-202ENST00000432827 PKD1L3Q7Z443 1732 aa32.93■■■□□ 2.86
LCNL1-202ENST00000432827 MEGF6O75095 1541 aa32.91■■■□□ 2.86
LCNL1-202ENST00000432827 EIF4A1P60842 406 aaKnown RBP32.91■■■□□ 2.86
LCNL1-202ENST00000432827 LTBP4Q8N2S1 1624 aa32.89■■■□□ 2.86
LCNL1-202ENST00000432827 SCN11AQ9UI33 1791 aa32.89■■■□□ 2.86
LCNL1-202ENST00000432827 BTBD11A6QL63 1104 aa32.89■■■□□ 2.86
LCNL1-202ENST00000432827 WDR17Q8IZU2 1322 aa32.89■■■□□ 2.86
LCNL1-202ENST00000432827 RGS3P49796 1198 aa32.88■■■□□ 2.85
LCNL1-202ENST00000432827 SMC5Q8IY18 1101 aa32.88■■■□□ 2.85
LCNL1-202ENST00000432827 PDZRN3Q9UPQ7 1066 aa32.88■■■□□ 2.85
LCNL1-202ENST00000432827 AHDC1Q5TGY3 1603 aaPredicted RBP32.87■■■□□ 2.85
LCNL1-202ENST00000432827 COL5A2P05997 1499 aaPredicted RBP32.86■■■□□ 2.85
LCNL1-202ENST00000432827 PARP4Q9UKK3 1724 aaKnown RBP32.86■■■□□ 2.85
LCNL1-202ENST00000432827 IFNL2Q8IZJ0 200 aa32.85■■■□□ 2.85
LCNL1-202ENST00000432827 PHKG2P15735 406 aa32.84■■■□□ 2.85
LCNL1-202ENST00000432827 FAM161AQ3B820 660 aa32.84■■■□□ 2.85
LCNL1-202ENST00000432827 ROBO1Q9Y6N7 1651 aa32.84■■■□□ 2.85
LCNL1-202ENST00000432827 CCT4P50991 539 aaKnown RBP32.84■■■□□ 2.85
LCNL1-202ENST00000432827 HDGFL1Q5TGJ6 251 aa32.83■■■□□ 2.85
LCNL1-202ENST00000432827 G2E3Q7L622 706 aa32.83■■■□□ 2.85
LCNL1-202ENST00000432827 HSP90AB1P08238 724 aaKnown RBP32.82■■■□□ 2.84
LCNL1-202ENST00000432827 FLIIQ13045 1269 aa32.82■■■□□ 2.84
LCNL1-202ENST00000432827 N4BP2Q86UW6 1770 aaPredicted RBP32.81■■■□□ 2.84
LCNL1-202ENST00000432827 HEG1Q9ULI3 1381 aa32.81■■■□□ 2.84
LCNL1-202ENST00000432827 PXDNLA1KZ92 1463 aa32.8■■■□□ 2.84
LCNL1-202ENST00000432827 MRC1P22897 1456 aa32.8■■■□□ 2.84
LCNL1-202ENST00000432827 KDM6AO15550 1401 aaPredicted RBP32.8■■■□□ 2.84
LCNL1-202ENST00000432827 GCC1Q96CN9 775 aa32.79■■■□□ 2.84
LCNL1-202ENST00000432827 COL22A1Q8NFW1 1626 aaPredicted RBP32.78■■■□□ 2.84
LCNL1-202ENST00000432827 DCAF5Q96JK2 942 aa32.78■■■□□ 2.84
LCNL1-202ENST00000432827 CARD10Q9BWT7 1032 aa32.78■■■□□ 2.84
LCNL1-202ENST00000432827 TOM1L2Q6ZVM7 507 aa32.77■■■□□ 2.84
LCNL1-202ENST00000432827 SLC52A2Q9HAB3 445 aa32.77■■■□□ 2.84
LCNL1-202ENST00000432827 KCNQ3O43525 872 aa32.76■■■□□ 2.83
LCNL1-202ENST00000432827 FKBP5Q13451 457 aaPredicted RBP32.74■■■□□ 2.83
LCNL1-202ENST00000432827 C8orf34Q49A92 452 aa32.73■■■□□ 2.83
LCNL1-202ENST00000432827 RPAP2Q8IXW5 612 aaPredicted RBP32.73■■■□□ 2.83
LCNL1-202ENST00000432827 NUCB1Q02818 461 aa32.73■■■□□ 2.83
LCNL1-202ENST00000432827 C1orf115Q9H7X2 142 aa32.73■■■□□ 2.83
LCNL1-202ENST00000432827 CYP27B1O15528 508 aa32.72■■■□□ 2.83
LCNL1-202ENST00000432827 GIGYF1O75420 1035 aaPredicted RBP32.72■■■□□ 2.83
LCNL1-202ENST00000432827 NECTIN2Q92692 538 aa32.72■■■□□ 2.83
LCNL1-202ENST00000432827 COL14A1Q05707 1796 aaKnown RBP32.71■■■□□ 2.83
LCNL1-202ENST00000432827 ANP32AP39687 249 aaKnown RBP32.71■■■□□ 2.83
LCNL1-202ENST00000432827 SIRT2Q8IXJ6 389 aa32.7■■■□□ 2.83
LCNL1-202ENST00000432827 PCDH11XQ9BZA7 1347 aa32.7■■■□□ 2.83
LCNL1-202ENST00000432827 PCDH11YQ9BZA8 1340 aa32.7■■■□□ 2.83
LCNL1-202ENST00000432827 F6X3S4 739 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 ANKRD44Q8N8A2 993 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 CERKQ8TCT0 537 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 ATP10DQ9P241 1426 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 EIF2S2P20042 333 aaKnown RBP32.69■■■□□ 2.82
LCNL1-202ENST00000432827 EVA1CP58658 441 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 SLC4A10Q6U841 1118 aa32.69■■■□□ 2.82
LCNL1-202ENST00000432827 ZNF790Q6PG37 636 aa32.68■■■□□ 2.82
LCNL1-202ENST00000432827 ZCRB1Q8TBF4 217 aaKnown RBP32.68■■■□□ 2.82
LCNL1-202ENST00000432827 DBF4Q9UBU7 674 aaPredicted RBP32.68■■■□□ 2.82
LCNL1-202ENST00000432827 IL2RBP14784 551 aa32.67■■■□□ 2.82
LCNL1-202ENST00000432827 MEIS3Q99687 375 aa32.66■■■□□ 2.82
LCNL1-202ENST00000432827 CHPF2Q9P2E5 772 aa32.66■■■□□ 2.82
LCNL1-202ENST00000432827 GNAI3P08754 354 aa32.65■■■□□ 2.82
LCNL1-202ENST00000432827 CHD1LQ86WJ1 897 aa32.65■■■□□ 2.82
LCNL1-202ENST00000432827 NFATC2IPQ8NCF5 419 aa32.64■■■□□ 2.82
LCNL1-202ENST00000432827 CEP85Q6P2H3 762 aa32.63■■■□□ 2.81
LCNL1-202ENST00000432827 NKX1-1Q15270 411 aaPredicted RBP32.62■■■□□ 2.81
LCNL1-202ENST00000432827 LARP1Q6PKG0 1096 aaKnown RBP32.62■■■□□ 2.81
LCNL1-202ENST00000432827 DCTPP1Q9H773 170 aa32.62■■■□□ 2.81
LCNL1-202ENST00000432827 PHAXQ9H814 394 aaKnown RBP32.62■■■□□ 2.81
LCNL1-202ENST00000432827 STRN4Q9NRL3 753 aa32.62■■■□□ 2.81
LCNL1-202ENST00000432827 HMMRO75330 724 aa32.6■■■□□ 2.81
LCNL1-202ENST00000432827 GNAI2P04899 355 aa32.6■■■□□ 2.81
LCNL1-202ENST00000432827 SHANK3Q9BYB0 1731 aa32.6■■■□□ 2.81
LCNL1-202ENST00000432827 CABP4P57796 275 aa32.59■■■□□ 2.81
LCNL1-202ENST00000432827 HYPKQ9NX55 129 aa32.59■■■□□ 2.81
LCNL1-202ENST00000432827 PHLPP1O60346 1717 aa32.59■■■□□ 2.81
LCNL1-202ENST00000432827 ERVV-2B6SEH9 535 aa32.59■■■□□ 2.81
LCNL1-202ENST00000432827 COL16A1Q07092 1604 aaPredicted RBP32.58■■■□□ 2.81
LCNL1-202ENST00000432827 TTC5Q8N0Z6 440 aa32.58■■■□□ 2.81
LCNL1-202ENST00000432827 ANKRD45Q5TZF3 282 aa32.57■■■□□ 2.8
LCNL1-202ENST00000432827 ILDR2Q71H61 639 aa32.57■■■□□ 2.8
LCNL1-202ENST00000432827 C5P01031 1676 aa32.57■■■□□ 2.8
LCNL1-202ENST00000432827 DNAAF4Q8WXU2 420 aa32.56■■■□□ 2.8
LCNL1-202ENST00000432827 DDX21Q9NR30 783 aaKnown RBP eCLIP32.56■■■□□ 2.8
LCNL1-202ENST00000432827 BTG4Q9NY30 223 aa32.56■■■□□ 2.8
LCNL1-202ENST00000432827 SLC39A6Q13433 755 aa32.55■■■□□ 2.8
LCNL1-202ENST00000432827 FMNL2Q96PY5 1086 aa32.55■■■□□ 2.8
LCNL1-202ENST00000432827 LNPKQ9C0E8 428 aa32.55■■■□□ 2.8
LCNL1-202ENST00000432827 SRCIN1Q9C0H9 1055 aa32.55■■■□□ 2.8
LCNL1-202ENST00000432827 SNRPA1P09661 255 aaKnown RBP32.53■■■□□ 2.8
LCNL1-202ENST00000432827 IPO9Q96P70 1041 aaKnown RBP32.53■■■□□ 2.8
LCNL1-202ENST00000432827 PLCH1Q4KWH8 1693 aa32.53■■■□□ 2.8
LCNL1-202ENST00000432827 TOM1O60784 492 aa32.52■■■□□ 2.8
LCNL1-202ENST00000432827 ZNF496Q96IT1 587 aaPredicted RBP32.51■■■□□ 2.8
LCNL1-202ENST00000432827 ADCY9O60503 1353 aa32.51■■■□□ 2.8
LCNL1-202ENST00000432827 PI4KAP2A4QPH2 592 aa32.51■■■□□ 2.79
LCNL1-202ENST00000432827 PI4KAP1Q8N8J0 262 aa32.51■■■□□ 2.79
LCNL1-202ENST00000432827 LAMB4A4D0S4 1761 aa32.5■■■□□ 2.79
LCNL1-202ENST00000432827 BEND3Q5T5X7 828 aa32.5■■■□□ 2.79
LCNL1-202ENST00000432827 KSR2Q6VAB6 950 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms