RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 USP26Q9BXU7 913 aa20.54■□□□□ 0.88
CHFR-203ENST00000432561 LGR6Q9HBX8 967 aa20.54■□□□□ 0.88
CHFR-203ENST00000432561 HTATSF1O43719 755 aaKnown RBP20.54■□□□□ 0.88
CHFR-203ENST00000432561 EIF2S2P20042 333 aaKnown RBP20.54■□□□□ 0.88
CHFR-203ENST00000432561 RGPD2P0DJD1 1756 aa20.53■□□□□ 0.88
CHFR-203ENST00000432561 PSME1Q06323 249 aa20.53■□□□□ 0.88
CHFR-203ENST00000432561 LRRFIP2Q9Y608 721 aaKnown RBP20.53■□□□□ 0.88
CHFR-203ENST00000432561 PDE1AP54750 535 aa20.52■□□□□ 0.88
CHFR-203ENST00000432561 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.87
CHFR-203ENST00000432561 ANKLE2Q86XL3 938 aa20.52■□□□□ 0.87
CHFR-203ENST00000432561 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.87
CHFR-203ENST00000432561 KCNQ3O43525 872 aa20.51■□□□□ 0.87
CHFR-203ENST00000432561 ANXA1P04083 346 aa20.5■□□□□ 0.87
CHFR-203ENST00000432561 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
CHFR-203ENST00000432561 IP6K1Q92551 441 aa20.5■□□□□ 0.87
CHFR-203ENST00000432561 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
CHFR-203ENST00000432561 ORAI2Q96SN7 254 aa20.49■□□□□ 0.87
CHFR-203ENST00000432561 SSFA2P28290 1259 aa20.49■□□□□ 0.87
CHFR-203ENST00000432561 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
CHFR-203ENST00000432561 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
CHFR-203ENST00000432561 GNAI3P08754 354 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 MPRIPQ6WCQ1 1025 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 LRRCC1Q9C099 1032 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 CASC1Q6TDU7 716 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 IL1RAPL2Q9NP60 686 aa20.47■□□□□ 0.87
CHFR-203ENST00000432561 RABEP1Q15276 862 aa20.46■□□□□ 0.87
CHFR-203ENST00000432561 PANK2Q9BZ23 570 aa20.46■□□□□ 0.87
CHFR-203ENST00000432561 NFAT5O94916 1531 aa20.46■□□□□ 0.87
CHFR-203ENST00000432561 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
CHFR-203ENST00000432561 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
CHFR-203ENST00000432561 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
CHFR-203ENST00000432561 CIZ1Q9ULV3 898 aaPredicted RBP20.45■□□□□ 0.86
CHFR-203ENST00000432561 XRCC6P12956 609 aaKnown RBP eCLIP20.45■□□□□ 0.866e-7■■■■■ 28.8
CHFR-203ENST00000432561 GOLGA6L3A6NEY3 463 aa20.44■□□□□ 0.86
CHFR-203ENST00000432561 UBTFL1P0CB47 393 aaPredicted RBP20.44■□□□□ 0.86
CHFR-203ENST00000432561 RILPL2Q969X0 211 aa20.44■□□□□ 0.86
CHFR-203ENST00000432561 MX1P20591 662 aa20.44■□□□□ 0.86
CHFR-203ENST00000432561 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
CHFR-203ENST00000432561 SALL3Q9BXA9 1300 aa20.44■□□□□ 0.86
CHFR-203ENST00000432561 CEMIPQ8WUJ3 1361 aa20.43■□□□□ 0.86
CHFR-203ENST00000432561 TRIM6-TRIM34B2RNG4 842 aa20.43■□□□□ 0.86
CHFR-203ENST00000432561 ERC2O15083 957 aa20.43■□□□□ 0.86
CHFR-203ENST00000432561 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
CHFR-203ENST00000432561 PKP1Q13835 747 aa20.43■□□□□ 0.86
CHFR-203ENST00000432561 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
CHFR-203ENST00000432561 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
CHFR-203ENST00000432561 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
CHFR-203ENST00000432561 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
CHFR-203ENST00000432561 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
CHFR-203ENST00000432561 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 REC8O95072 547 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 L1TD1Q5T7N2 865 aaKnown RBP20.41■□□□□ 0.86
CHFR-203ENST00000432561 NUTM1Q86Y26 1132 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 ADGRL3Q9HAR2 1447 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 ZGPATQ8N5A5 531 aaKnown RBP20.41■□□□□ 0.86
CHFR-203ENST00000432561 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
CHFR-203ENST00000432561 GCP02774 474 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 TEFQ10587 303 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 TUBGCP6Q96RT7 1819 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 PXDNQ92626 1479 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 MAP4K4O95819 1239 aaPredicted RBP20.4■□□□□ 0.86
CHFR-203ENST00000432561 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
CHFR-203ENST00000432561 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
CHFR-203ENST00000432561 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
CHFR-203ENST00000432561 BABAM1Q9NWV8 329 aa20.39■□□□□ 0.85
CHFR-203ENST00000432561 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.85
CHFR-203ENST00000432561 IL25Q9H293 177 aa20.38■□□□□ 0.85
CHFR-203ENST00000432561 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
CHFR-203ENST00000432561 ESYT1Q9BSJ8 1104 aa20.38■□□□□ 0.85
CHFR-203ENST00000432561 N4BP2Q86UW6 1770 aaPredicted RBP20.37■□□□□ 0.85
CHFR-203ENST00000432561 SRGAP3O43295 1099 aa20.37■□□□□ 0.85
CHFR-203ENST00000432561 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
CHFR-203ENST00000432561 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
CHFR-203ENST00000432561 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 SOS1Q07889 1333 aaPredicted RBP20.36■□□□□ 0.85
CHFR-203ENST00000432561 ST18O60284 1047 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 CHMLP26374 656 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 AKAP4Q5JQC9 854 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 ARHGEF25Q86VW2 580 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 SSH3Q8TE77 659 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
CHFR-203ENST00000432561 MED1Q15648 1581 aaPredicted RBP20.36■□□□□ 0.85
CHFR-203ENST00000432561 PXDNLA1KZ92 1463 aa20.35■□□□□ 0.85
CHFR-203ENST00000432561 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
CHFR-203ENST00000432561 NEK4P51957 841 aa20.35■□□□□ 0.85
CHFR-203ENST00000432561 GAS2L3Q86XJ1 694 aa20.35■□□□□ 0.85
CHFR-203ENST00000432561 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
CHFR-203ENST00000432561 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
CHFR-203ENST00000432561 BEND3Q5T5X7 828 aa20.35■□□□□ 0.85
CHFR-203ENST00000432561 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
CHFR-203ENST00000432561 ZC3H6P61129 1189 aaKnown RBP20.33■□□□□ 0.85
CHFR-203ENST00000432561 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms