RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 PANK3Q9H999 370 aa19.65■□□□□ 0.74
SEC13-212ENST00000432213 C1QTNF8P60827 252 aa19.64■□□□□ 0.73
SEC13-212ENST00000432213 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
SEC13-212ENST00000432213 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
SEC13-212ENST00000432213 BRCA1P38398 1863 aaKnown RBP19.63■□□□□ 0.73
SEC13-212ENST00000432213 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
SEC13-212ENST00000432213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEC13-212ENST00000432213 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
SEC13-212ENST00000432213 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
SEC13-212ENST00000432213 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
SEC13-212ENST00000432213 GNPATO15228 680 aa19.61■□□□□ 0.73
SEC13-212ENST00000432213 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
SEC13-212ENST00000432213 ATP10DQ9P241 1426 aa19.6■□□□□ 0.73
SEC13-212ENST00000432213 ATP6V1AP38606 617 aa19.6■□□□□ 0.73
SEC13-212ENST00000432213 ADCY9O60503 1353 aa19.59■□□□□ 0.73
SEC13-212ENST00000432213 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
SEC13-212ENST00000432213 SSFA2P28290 1259 aa19.59■□□□□ 0.73
SEC13-212ENST00000432213 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
SEC13-212ENST00000432213 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
SEC13-212ENST00000432213 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
SEC13-212ENST00000432213 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
SEC13-212ENST00000432213 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
SEC13-212ENST00000432213 GRIN3BO60391 1043 aa19.54■□□□□ 0.72
SEC13-212ENST00000432213 MMP10P09238 476 aa19.54■□□□□ 0.72
SEC13-212ENST00000432213 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
SEC13-212ENST00000432213 PLEKHG2Q9H7P9 1386 aa19.54■□□□□ 0.72
SEC13-212ENST00000432213 C10orf71Q711Q0 1435 aa19.52■□□□□ 0.72
SEC13-212ENST00000432213 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
SEC13-212ENST00000432213 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
SEC13-212ENST00000432213 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
SEC13-212ENST00000432213 IL13P35225 146 aa19.51■□□□□ 0.71
SEC13-212ENST00000432213 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
SEC13-212ENST00000432213 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
SEC13-212ENST00000432213 PLEKHO1Q53GL0 409 aaPredicted RBP19.5■□□□□ 0.71
SEC13-212ENST00000432213 SULT6B1Q6IMI4 303 aa19.5■□□□□ 0.71
SEC13-212ENST00000432213 ZNF526Q8TF50 670 aaPredicted RBP19.5■□□□□ 0.71
SEC13-212ENST00000432213 ARHGEF1Q92888 912 aaKnown RBP19.5■□□□□ 0.71
SEC13-212ENST00000432213 ARFGEF1Q9Y6D6 1849 aa19.5■□□□□ 0.71
SEC13-212ENST00000432213 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
SEC13-212ENST00000432213 MRC1P22897 1456 aa19.49■□□□□ 0.71
SEC13-212ENST00000432213 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
SEC13-212ENST00000432213 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
SEC13-212ENST00000432213 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
SEC13-212ENST00000432213 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
SEC13-212ENST00000432213 GYS1P13807 737 aa19.48■□□□□ 0.71
SEC13-212ENST00000432213 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
SEC13-212ENST00000432213 CABP4P57796 275 aa19.47■□□□□ 0.71
SEC13-212ENST00000432213 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
SEC13-212ENST00000432213 SRP68Q9UHB9 627 aaKnown RBP19.47■□□□□ 0.71
SEC13-212ENST00000432213 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
SEC13-212ENST00000432213 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
SEC13-212ENST00000432213 A0A0G2JLW4 131 aa19.46■□□□□ 0.71
SEC13-212ENST00000432213 MTHFSP49914 203 aa19.46■□□□□ 0.71
SEC13-212ENST00000432213 TRAPPC3LQ5T215 181 aa19.46■□□□□ 0.71
SEC13-212ENST00000432213 COL3A1P02461 1466 aaPredicted RBP19.46■□□□□ 0.71
SEC13-212ENST00000432213 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
SEC13-212ENST00000432213 RPS6KA4O75676 772 aa19.45■□□□□ 0.7
SEC13-212ENST00000432213 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
SEC13-212ENST00000432213 RC3H1Q5TC82 1133 aaKnown RBP19.45■□□□□ 0.7
SEC13-212ENST00000432213 LGR6Q9HBX8 967 aa19.45■□□□□ 0.7
SEC13-212ENST00000432213 CRKLP46109 303 aaKnown RBP19.44■□□□□ 0.7
SEC13-212ENST00000432213 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
SEC13-212ENST00000432213 HMOX1P09601 288 aa19.43■□□□□ 0.7
SEC13-212ENST00000432213 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
SEC13-212ENST00000432213 DDR1Q08345 913 aa19.43■□□□□ 0.7
SEC13-212ENST00000432213 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
SEC13-212ENST00000432213 SBF1O95248 1867 aa19.43■□□□□ 0.7
SEC13-212ENST00000432213 DPEP1P16444 411 aa19.42■□□□□ 0.7
SEC13-212ENST00000432213 KCNA3P22001 575 aa19.42■□□□□ 0.7
SEC13-212ENST00000432213 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
SEC13-212ENST00000432213 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
SEC13-212ENST00000432213 NRXN2Q9P2S2 1712 aa19.42■□□□□ 0.7
SEC13-212ENST00000432213 PER1O15534 1290 aaPredicted RBP19.41■□□□□ 0.7
SEC13-212ENST00000432213 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
SEC13-212ENST00000432213 FKBP8Q14318 412 aa19.41■□□□□ 0.7
SEC13-212ENST00000432213 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
SEC13-212ENST00000432213 GPBP1L1Q9HC44 474 aaPredicted RBP19.41■□□□□ 0.7
SEC13-212ENST00000432213 DLEC1Q9Y238 1755 aa19.41■□□□□ 0.7
SEC13-212ENST00000432213 ADRA2BP18089 450 aa19.4■□□□□ 0.7
SEC13-212ENST00000432213 RFC4P35249 363 aa19.4■□□□□ 0.7
SEC13-212ENST00000432213 USP42Q9H9J4 1324 aaKnown RBP19.4■□□□□ 0.7
SEC13-212ENST00000432213 KIF3CO14782 793 aa19.39■□□□□ 0.69
SEC13-212ENST00000432213 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
SEC13-212ENST00000432213 NLGN1Q8N2Q7 840 aa19.39■□□□□ 0.69
SEC13-212ENST00000432213 BCS1LQ9Y276 419 aa19.39■□□□□ 0.69
SEC13-212ENST00000432213 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
SEC13-212ENST00000432213 ANKRD31Q8N7Z5 1873 aa19.37■□□□□ 0.69
SEC13-212ENST00000432213 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
SEC13-212ENST00000432213 TGFB2P61812 414 aa19.37■□□□□ 0.69
SEC13-212ENST00000432213 MTHFSDQ2M296 383 aaKnown RBP19.37■□□□□ 0.69
SEC13-212ENST00000432213 AKAP4Q5JQC9 854 aa19.37■□□□□ 0.69
SEC13-212ENST00000432213 SOS1Q07889 1333 aaPredicted RBP19.36■□□□□ 0.69
SEC13-212ENST00000432213 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
SEC13-212ENST00000432213 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
SEC13-212ENST00000432213 CCDC87Q9NVE4 849 aa19.35■□□□□ 0.69
SEC13-212ENST00000432213 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
SEC13-212ENST00000432213 SCN7AQ01118 1682 aa19.35■□□□□ 0.69
SEC13-212ENST00000432213 COL11A2P13942 1736 aaPredicted RBP19.34■□□□□ 0.69
SEC13-212ENST00000432213 POLRMTO00411 1230 aaKnown RBP19.34■□□□□ 0.69
SEC13-212ENST00000432213 CYP19A1P11511 503 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms