RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 USP21Q9UK80 565 aa17.65■□□□□ 0.42
RTN1-204ENST00000432103 LRP6O75581 1613 aa17.64■□□□□ 0.42
RTN1-204ENST00000432103 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
RTN1-204ENST00000432103 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
RTN1-204ENST00000432103 BCAR3O75815 825 aa17.64■□□□□ 0.41
RTN1-204ENST00000432103 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
RTN1-204ENST00000432103 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
RTN1-204ENST00000432103 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
RTN1-204ENST00000432103 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
RTN1-204ENST00000432103 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
RTN1-204ENST00000432103 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
RTN1-204ENST00000432103 CABP4P57796 275 aa17.63■□□□□ 0.41
RTN1-204ENST00000432103 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.62■□□□□ 0.41
RTN1-204ENST00000432103 SCN11AQ9UI33 1791 aa17.62■□□□□ 0.41
RTN1-204ENST00000432103 HOXB7P09629 217 aa17.62■□□□□ 0.41
RTN1-204ENST00000432103 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
RTN1-204ENST00000432103 MRC1P22897 1456 aa17.62■□□□□ 0.41
RTN1-204ENST00000432103 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
RTN1-204ENST00000432103 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
RTN1-204ENST00000432103 DDB1Q16531 1140 aa17.61■□□□□ 0.41
RTN1-204ENST00000432103 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
RTN1-204ENST00000432103 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
RTN1-204ENST00000432103 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
RTN1-204ENST00000432103 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
RTN1-204ENST00000432103 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
RTN1-204ENST00000432103 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
RTN1-204ENST00000432103 PLIN1O60240 522 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 TTC5Q8N0Z6 440 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
RTN1-204ENST00000432103 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
RTN1-204ENST00000432103 CCDC30Q5VVM6 783 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 STK31Q9BXU1 1019 aa17.59■□□□□ 0.41
RTN1-204ENST00000432103 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.4
RTN1-204ENST00000432103 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.4
RTN1-204ENST00000432103 AFF2P51816 1311 aa17.57■□□□□ 0.4
RTN1-204ENST00000432103 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
RTN1-204ENST00000432103 TRPC5Q9UL62 973 aaPredicted RBP17.57■□□□□ 0.4
RTN1-204ENST00000432103 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
RTN1-204ENST00000432103 FTSJ3Q8IY81 847 aaKnown RBP17.56■□□□□ 0.4
RTN1-204ENST00000432103 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
RTN1-204ENST00000432103 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
RTN1-204ENST00000432103 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
RTN1-204ENST00000432103 AAMPQ13685 434 aa17.55■□□□□ 0.4
RTN1-204ENST00000432103 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
RTN1-204ENST00000432103 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
RTN1-204ENST00000432103 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
RTN1-204ENST00000432103 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
RTN1-204ENST00000432103 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
RTN1-204ENST00000432103 FAM98CQ17RN3 349 aaKnown RBP17.54■□□□□ 0.4
RTN1-204ENST00000432103 DZIP1LQ8IYY4 767 aaKnown RBP17.54■□□□□ 0.4
RTN1-204ENST00000432103 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
RTN1-204ENST00000432103 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
RTN1-204ENST00000432103 PTPRCP08575 1304 aa17.53■□□□□ 0.4
RTN1-204ENST00000432103 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
RTN1-204ENST00000432103 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
RTN1-204ENST00000432103 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
RTN1-204ENST00000432103 ATRNO75882 1429 aa17.52■□□□□ 0.4
RTN1-204ENST00000432103 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
RTN1-204ENST00000432103 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
RTN1-204ENST00000432103 A0A0G2JS52 829 aa17.51■□□□□ 0.39
RTN1-204ENST00000432103 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
RTN1-204ENST00000432103 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
RTN1-204ENST00000432103 KCNQ3O43525 872 aa17.5■□□□□ 0.39
RTN1-204ENST00000432103 TRIM27P14373 513 aa17.5■□□□□ 0.39
RTN1-204ENST00000432103 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
RTN1-204ENST00000432103 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
RTN1-204ENST00000432103 SLC39A6Q13433 755 aa17.5■□□□□ 0.39
RTN1-204ENST00000432103 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
RTN1-204ENST00000432103 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
RTN1-204ENST00000432103 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
RTN1-204ENST00000432103 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
RTN1-204ENST00000432103 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
RTN1-204ENST00000432103 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
RTN1-204ENST00000432103 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
RTN1-204ENST00000432103 MARCH10Q8NA82 808 aaPredicted RBP17.47■□□□□ 0.39
RTN1-204ENST00000432103 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
RTN1-204ENST00000432103 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
RTN1-204ENST00000432103 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
RTN1-204ENST00000432103 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
RTN1-204ENST00000432103 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
RTN1-204ENST00000432103 BCL9O00512 1426 aa17.46■□□□□ 0.39
RTN1-204ENST00000432103 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
RTN1-204ENST00000432103 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
RTN1-204ENST00000432103 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
RTN1-204ENST00000432103 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
RTN1-204ENST00000432103 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 PIGBQ92521 554 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
RTN1-204ENST00000432103 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 GLI3P10071 1580 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 TOGARAM1Q9Y4F4 1720 aa17.45■□□□□ 0.38
RTN1-204ENST00000432103 ABCC4O15439 1325 aa17.44■□□□□ 0.38
RTN1-204ENST00000432103 FLIIQ13045 1269 aa17.44■□□□□ 0.38
RTN1-204ENST00000432103 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
RTN1-204ENST00000432103 PRIM1P49642 420 aaKnown RBP17.44■□□□□ 0.38
RTN1-204ENST00000432103 ITPRIPQ8IWB1 547 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms