RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
CHD1L-204ENST00000431239 LRRFIP2Q9Y608 721 aaKnown RBP22.77■■□□□ 1.24
CHD1L-204ENST00000431239 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
CHD1L-204ENST00000431239 GRPEL1Q9HAV7 217 aa22.75■■□□□ 1.23
CHD1L-204ENST00000431239 ERC2O15083 957 aa22.75■■□□□ 1.23
CHD1L-204ENST00000431239 REC8O95072 547 aa22.75■■□□□ 1.23
CHD1L-204ENST00000431239 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
CHD1L-204ENST00000431239 PHAXQ9H814 394 aaKnown RBP22.75■■□□□ 1.23
CHD1L-204ENST00000431239 GAS2L3Q86XJ1 694 aa22.74■■□□□ 1.23
CHD1L-204ENST00000431239 ZGPATQ8N5A5 531 aaKnown RBP22.74■■□□□ 1.23
CHD1L-204ENST00000431239 RILPL2Q969X0 211 aa22.74■■□□□ 1.23
CHD1L-204ENST00000431239 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
CHD1L-204ENST00000431239 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
CHD1L-204ENST00000431239 MRE11P49959 708 aa22.73■■□□□ 1.23
CHD1L-204ENST00000431239 HDGFL1Q5TGJ6 251 aa22.73■■□□□ 1.23
CHD1L-204ENST00000431239 TAF7Q15545 349 aaPredicted RBP22.73■■□□□ 1.23
CHD1L-204ENST00000431239 GNAI3P08754 354 aa22.72■■□□□ 1.23
CHD1L-204ENST00000431239 ST18O60284 1047 aa22.72■■□□□ 1.23
CHD1L-204ENST00000431239 BAG4O95429 457 aaKnown RBP22.72■■□□□ 1.23
CHD1L-204ENST00000431239 IL1RAPL2Q9NP60 686 aa22.72■■□□□ 1.23
CHD1L-204ENST00000431239 MX1P20591 662 aa22.71■■□□□ 1.23
CHD1L-204ENST00000431239 EIF5BO60841 1220 aaKnown RBP22.71■■□□□ 1.23
CHD1L-204ENST00000431239 MCTP1Q6DN14 999 aa22.71■■□□□ 1.23
CHD1L-204ENST00000431239 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
CHD1L-204ENST00000431239 NWD1Q149M9 1564 aa22.71■■□□□ 1.23
CHD1L-204ENST00000431239 FER1L4A9Z1Z3 1794 aa22.71■■□□□ 1.23
CHD1L-204ENST00000431239 HTATSF1O43719 755 aaKnown RBP22.71■■□□□ 1.23
CHD1L-204ENST00000431239 NOL8Q76FK4 1167 aaKnown RBP22.71■■□□□ 1.23
CHD1L-204ENST00000431239 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
CHD1L-204ENST00000431239 FOXD4L5Q5VV16 416 aaPredicted RBP22.69■■□□□ 1.22
CHD1L-204ENST00000431239 FOXD4L4Q8WXT5 416 aaPredicted RBP22.69■■□□□ 1.22
CHD1L-204ENST00000431239 USP44Q9H0E7 712 aa22.69■■□□□ 1.22
CHD1L-204ENST00000431239 DDX49Q9Y6V7 483 aaKnown RBP22.69■■□□□ 1.22
CHD1L-204ENST00000431239 UBTFL1P0CB47 393 aaPredicted RBP22.69■■□□□ 1.22
CHD1L-204ENST00000431239 ATP8B2P98198 1209 aa22.69■■□□□ 1.22
CHD1L-204ENST00000431239 OSBPL3Q9H4L5 887 aa22.69■■□□□ 1.22
CHD1L-204ENST00000431239 ANXA1P04083 346 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 CHAMP1Q96JM3 812 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 PHF8Q9UPP1 1060 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 XRN1Q8IZH2 1706 aaKnown RBP22.68■■□□□ 1.22
CHD1L-204ENST00000431239 LRRC37A3O60309 1634 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
CHD1L-204ENST00000431239 NCLP19338 710 aaKnown RBP22.68■■□□□ 1.22
CHD1L-204ENST00000431239 NEK4P51957 841 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 SKOR2Q2VWA4 1001 aaPredicted RBP22.68■■□□□ 1.22
CHD1L-204ENST00000431239 NBPF6Q5VWK0 638 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 UNC5CLQ8IV45 518 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 NBPF4Q96M43 638 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 ANO2Q9NQ90 1003 aa22.68■■□□□ 1.22
CHD1L-204ENST00000431239 ANKARQ7Z5J8 1434 aa22.67■■□□□ 1.22
CHD1L-204ENST00000431239 MAP4K4O95819 1239 aaPredicted RBP22.67■■□□□ 1.22
CHD1L-204ENST00000431239 NUTM1Q86Y26 1132 aa22.67■■□□□ 1.22
CHD1L-204ENST00000431239 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
CHD1L-204ENST00000431239 LRRC59Q96AG4 307 aaKnown RBP22.66■■□□□ 1.22
CHD1L-204ENST00000431239 IBTKQ9P2D0 1353 aaPredicted RBP22.66■■□□□ 1.22
CHD1L-204ENST00000431239 SALL3Q9BXA9 1300 aa22.66■■□□□ 1.22
CHD1L-204ENST00000431239 KCNQ3O43525 872 aa22.66■■□□□ 1.22
CHD1L-204ENST00000431239 ESYT1Q9BSJ8 1104 aa22.66■■□□□ 1.22
CHD1L-204ENST00000431239 PALD1Q9ULE6 856 aa22.66■■□□□ 1.22
CHD1L-204ENST00000431239 ESCO1Q5FWF5 840 aa22.65■■□□□ 1.22
CHD1L-204ENST00000431239 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
CHD1L-204ENST00000431239 NUCB2P80303 420 aa22.64■■□□□ 1.21
CHD1L-204ENST00000431239 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
CHD1L-204ENST00000431239 PSME1Q06323 249 aa22.63■■□□□ 1.21
CHD1L-204ENST00000431239 PPP1R42Q7Z4L9 355 aa22.63■■□□□ 1.21
CHD1L-204ENST00000431239 LMOD2Q6P5Q4 547 aa22.62■■□□□ 1.21
CHD1L-204ENST00000431239 CHMLP26374 656 aa22.62■■□□□ 1.21
CHD1L-204ENST00000431239 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
CHD1L-204ENST00000431239 LTN1O94822 1766 aa22.62■■□□□ 1.21
CHD1L-204ENST00000431239 NBPF7P0C2Y1 421 aaPredicted RBP22.61■■□□□ 1.21
CHD1L-204ENST00000431239 PTMSP20962 102 aa22.61■■□□□ 1.21
CHD1L-204ENST00000431239 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
CHD1L-204ENST00000431239 IL25Q9H293 177 aa22.61■■□□□ 1.21
CHD1L-204ENST00000431239 CAVIN1Q6NZI2 390 aaKnown RBP22.61■■□□□ 1.21
CHD1L-204ENST00000431239 IP6K1Q92551 441 aa22.61■■□□□ 1.21
CHD1L-204ENST00000431239 UPF3BQ9BZI7 483 aaKnown RBP22.61■■□□□ 1.21
CHD1L-204ENST00000431239 SRGAP3O43295 1099 aa22.6■■□□□ 1.21
CHD1L-204ENST00000431239 CYP2E1P05181 493 aaPredicted RBP22.6■■□□□ 1.21
CHD1L-204ENST00000431239 SOS1Q07889 1333 aaPredicted RBP22.6■■□□□ 1.21
CHD1L-204ENST00000431239 PI4KAP2A4QPH2 592 aa22.6■■□□□ 1.21
CHD1L-204ENST00000431239 KLHL40Q2TBA0 621 aa22.6■■□□□ 1.21
CHD1L-204ENST00000431239 PI4KAP1Q8N8J0 262 aa22.6■■□□□ 1.21
CHD1L-204ENST00000431239 TMX3Q96JJ7 454 aa22.6■■□□□ 1.21
CHD1L-204ENST00000431239 ZNF530Q6P9A1 599 aaPredicted RBP22.59■■□□□ 1.21
CHD1L-204ENST00000431239 CLEC17AQ6ZS10 378 aa22.59■■□□□ 1.21
CHD1L-204ENST00000431239 ZDHHC9Q9Y397 364 aa22.59■■□□□ 1.21
CHD1L-204ENST00000431239 EIF4A1P60842 406 aaKnown RBP22.59■■□□□ 1.21
CHD1L-204ENST00000431239 PRPF40AO75400 957 aaKnown RBP22.58■■□□□ 1.21
CHD1L-204ENST00000431239 TEFQ10587 303 aa22.58■■□□□ 1.21
CHD1L-204ENST00000431239 CWC22Q9HCG8 908 aaKnown RBP22.58■■□□□ 1.21
CHD1L-204ENST00000431239 MCCP23508 829 aa22.57■■□□□ 1.2
CHD1L-204ENST00000431239 ISY1Q9ULR0 285 aaKnown RBP22.57■■□□□ 1.2
CHD1L-204ENST00000431239 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
CHD1L-204ENST00000431239 LMBRD1Q9NUN5 540 aa22.57■■□□□ 1.2
CHD1L-204ENST00000431239 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
CHD1L-204ENST00000431239 CACNA1FO60840 1977 aa22.56■■□□□ 1.2
CHD1L-204ENST00000431239 CEMIPQ8WUJ3 1361 aa22.56■■□□□ 1.2
CHD1L-204ENST00000431239 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
CHD1L-204ENST00000431239 FOXD4L6Q3SYB3 417 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms