RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 PIP4K2AP48426 406 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 IRX3P78415 501 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 DCAF15Q66K64 600 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC146Q8IYE0 955 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 FSD1Q9BTV5 496 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 ANKRD2Q9GZV1 360 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 ANO2Q9NQ90 1003 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 RBM28Q9NW13 759 aaKnown RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CTNNA3Q9UI47 895 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 KIAA0586Q9BVV6 1533 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC69A6NI79 296 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 LARP1Q6PKG0 1096 aaKnown RBP5.35□□□□□ -1.55
LRRK2-204ENST00000430804 NOL7Q9UMY1 257 aaKnown RBP5.35□□□□□ -1.55
LRRK2-204ENST00000430804 HFM1A2PYH4 1435 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 ACEP12821 1306 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 PSMA5P28066 241 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 MAP3K12Q12852 859 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 ZKSCAN2Q63HK3 967 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 ANKRD50Q9ULJ7 1429 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 EIF4E1BA6NMX2 242 aaKnown RBP5.35□□□□□ -1.55
LRRK2-204ENST00000430804 WASLO00401 505 aaPredicted RBP5.35□□□□□ -1.55
LRRK2-204ENST00000430804 GIGYF1O75420 1035 aaPredicted RBP5.35□□□□□ -1.55
LRRK2-204ENST00000430804 CCNA1P78396 465 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 TTC21AQ8NDW8 1320 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 SLC17A8Q8NDX2 589 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 NESP48681 1621 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 GNAT3A8MTJ3 354 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 ATP5J2-PTCD1G3V325 749 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 CUX1P39880 1505 aa5.35□□□□□ -1.55
LRRK2-204ENST00000430804 ADRA2BP18089 450 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 MYO6Q9UM54 1294 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 EXOC4Q96A65 974 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 VPS8Q8N3P4 1428 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 BAG4O95429 457 aaKnown RBP5.34□□□□□ -1.55
LRRK2-204ENST00000430804 YY1P25490 414 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 CHRNA2Q15822 529 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 PDILTQ8N807 584 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 RGS22Q8NE09 1264 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 SRCIN1Q9C0H9 1055 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 PANK3Q9H999 370 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 REC8O95072 547 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 FMNL1O95466 1100 aaPredicted RBP5.34□□□□□ -1.55
LRRK2-204ENST00000430804 HSPA5P11021 654 aaKnown RBP5.34□□□□□ -1.55
LRRK2-204ENST00000430804 HS1BP3Q53T59 392 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 SULT6B1Q6IMI4 303 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC112Q8NEF3 446 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 CPLX3Q8WVH0 158 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 MBIPQ9NS73 344 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 STK24Q9Y6E0 443 aa5.34□□□□□ -1.55
LRRK2-204ENST00000430804 CKAP2LQ8IYA6 745 aa5.34□□□□□ -1.56
LRRK2-204ENST00000430804 PIBF1Q8WXW3 757 aa5.34□□□□□ -1.56
LRRK2-204ENST00000430804 SIN3AQ96ST3 1273 aa5.34□□□□□ -1.56
LRRK2-204ENST00000430804 FERMT1Q9BQL6 677 aa5.34□□□□□ -1.56
LRRK2-204ENST00000430804 RAB34Q9BZG1 259 aa5.34□□□□□ -1.56
LRRK2-204ENST00000430804 ZNHIT6Q9NWK9 470 aaKnown RBP5.34□□□□□ -1.56
LRRK2-204ENST00000430804 CNGA1P29973 690 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CETN2P41208 172 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 DALRD3Q5D0E6 543 aaKnown RBP5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CDC37L1Q7L3B6 337 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CNTROBQ8N137 903 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 ANKRD24Q8TF21 1146 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 ZHX3Q9H4I2 956 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 NSD3Q9BZ95 1437 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 HMGXB3Q12766 1538 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 UBXN2AP68543 259 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 ERICH6BQ5W0A0 696 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 GOLGA6L1Q8N7Z2 621 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC12Q8WUD4 166 aaPredicted RBP5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC129Q6ZRS4 1044 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 RUNDC1Q96C34 613 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 RAD50Q92878 1312 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 ZRSR2Q15696 482 aaKnown RBP5.33□□□□□ -1.56
LRRK2-204ENST00000430804 SUPT20HL1Q3ZLR7 823 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 DPP8Q6V1X1 898 aaPredicted RBP5.33□□□□□ -1.56
LRRK2-204ENST00000430804 NBPF11Q86T75 865 aa5.33□□□□□ -1.56
LRRK2-204ENST00000430804 RNF41Q9H4P4 317 aaPredicted RBP5.33□□□□□ -1.56
LRRK2-204ENST00000430804 CDKL5O76039 1030 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 STIM1Q13586 685 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 WASF1Q92558 559 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 ZBED2Q9BTP6 218 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 NIP7Q9Y221 180 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 EPB41L2O43491 1005 aaKnown RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 MAGEC2Q9UBF1 373 aaPredicted RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 TROQ12816 1431 aaPredicted RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 ERBINQ96RT1 1412 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 TOPBP1Q92547 1522 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 CDR1P51861 262 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 PDE4BQ07343 736 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 DDX19BQ9UMR2 479 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 PPIP5K2O43314 1243 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 MYD88Q99836 296 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 ATF5Q9Y2D1 282 aaPredicted RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 IDH1O75874 414 aaKnown RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 CC2D2BQ6DHV5 1058 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 B4GALNT3Q6L9W6 998 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 TXLNBQ8N3L3 684 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms