RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 EP400Q96L91 3159 aa23.77■■□□□ 1.4
CDC42EP1-203ENST00000430687 TNS1Q9HBL0 1735 aaKnown RBP23.76■■□□□ 1.39
CDC42EP1-203ENST00000430687 TAF7Q15545 349 aaPredicted RBP23.75■■□□□ 1.39
CDC42EP1-203ENST00000430687 ITGB4P16144 1822 aa23.75■■□□□ 1.39
CDC42EP1-203ENST00000430687 DLG5Q8TDM6 1919 aa23.74■■□□□ 1.39
CDC42EP1-203ENST00000430687 CALD1Q05682 793 aaKnown RBP23.74■■□□□ 1.39
CDC42EP1-203ENST00000430687 ATG3Q9NT62 314 aa23.74■■□□□ 1.39
CDC42EP1-203ENST00000430687 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
CDC42EP1-203ENST00000430687 BTAF1O14981 1849 aa23.73■■□□□ 1.39
CDC42EP1-203ENST00000430687 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
CDC42EP1-203ENST00000430687 THUMPD2Q9BTF0 503 aaKnown RBP23.72■■□□□ 1.39
CDC42EP1-203ENST00000430687 ASAP1Q9ULH1 1129 aa23.72■■□□□ 1.39
CDC42EP1-203ENST00000430687 PALLDQ8WX93 1383 aa23.71■■□□□ 1.39
CDC42EP1-203ENST00000430687 BTBD11A6QL63 1104 aa23.71■■□□□ 1.39
CDC42EP1-203ENST00000430687 WWC1Q8IX03 1113 aa23.71■■□□□ 1.39
CDC42EP1-203ENST00000430687 HMGB2P26583 209 aaKnown RBP23.7■■□□□ 1.38
CDC42EP1-203ENST00000430687 EN1Q05925 392 aaPredicted RBP23.7■■□□□ 1.38
CDC42EP1-203ENST00000430687 SLC27A3Q5K4L6 730 aa23.69■■□□□ 1.38
CDC42EP1-203ENST00000430687 DEFB132Q7Z7B7 95 aa23.69■■□□□ 1.38
CDC42EP1-203ENST00000430687 RGPD3A6NKT7 1758 aaPredicted RBP23.69■■□□□ 1.38
CDC42EP1-203ENST00000430687 RGPD4Q7Z3J3 1758 aa23.69■■□□□ 1.38
CDC42EP1-203ENST00000430687 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
CDC42EP1-203ENST00000430687 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
CDC42EP1-203ENST00000430687 TTC5Q8N0Z6 440 aa23.68■■□□□ 1.38
CDC42EP1-203ENST00000430687 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
CDC42EP1-203ENST00000430687 TXNRD1Q16881 649 aa23.67■■□□□ 1.38
CDC42EP1-203ENST00000430687 WDR63Q8IWG1 891 aa23.67■■□□□ 1.38
CDC42EP1-203ENST00000430687 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 IL16Q14005 1332 aa23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 SLC39A6Q13433 755 aa23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 PROM2Q8N271 834 aa23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 CFAP44Q96MT7 982 aa23.66■■□□□ 1.38
CDC42EP1-203ENST00000430687 CHL1O00533 1208 aa23.65■■□□□ 1.38
CDC42EP1-203ENST00000430687 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
CDC42EP1-203ENST00000430687 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
CDC42EP1-203ENST00000430687 PAPPAQ13219 1627 aa23.64■■□□□ 1.38
CDC42EP1-203ENST00000430687 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.37
CDC42EP1-203ENST00000430687 LOC102724428A0A0B4J2F2 783 aa23.64■■□□□ 1.37
CDC42EP1-203ENST00000430687 SIK1P57059 783 aa23.64■■□□□ 1.37
CDC42EP1-203ENST00000430687 GNAI1P63096 354 aa23.64■■□□□ 1.37
CDC42EP1-203ENST00000430687 ZNF853P0CG23 659 aa23.63■■□□□ 1.37
CDC42EP1-203ENST00000430687 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
CDC42EP1-203ENST00000430687 RBM42Q9BTD8 480 aaKnown RBP23.63■■□□□ 1.37
CDC42EP1-203ENST00000430687 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
CDC42EP1-203ENST00000430687 CCNL1Q9UK58 526 aaPredicted RBP23.63■■□□□ 1.37
CDC42EP1-203ENST00000430687 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
CDC42EP1-203ENST00000430687 LY75O60449 1722 aa23.62■■□□□ 1.37
CDC42EP1-203ENST00000430687 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
CDC42EP1-203ENST00000430687 FMNL2Q96PY5 1086 aa23.62■■□□□ 1.37
CDC42EP1-203ENST00000430687 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
CDC42EP1-203ENST00000430687 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
CDC42EP1-203ENST00000430687 ATP6V1AP38606 617 aa23.6■■□□□ 1.37
CDC42EP1-203ENST00000430687 ZNF496Q96IT1 587 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP1-203ENST00000430687 LRRC4BQ9NT99 713 aa23.6■■□□□ 1.37
CDC42EP1-203ENST00000430687 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
CDC42EP1-203ENST00000430687 KCNQ3O43525 872 aa23.59■■□□□ 1.37
CDC42EP1-203ENST00000430687 SLC4A9Q96Q91 983 aa23.59■■□□□ 1.37
CDC42EP1-203ENST00000430687 ZNF831Q5JPB2 1677 aa23.59■■□□□ 1.37
CDC42EP1-203ENST00000430687 HEG1Q9ULI3 1381 aa23.58■■□□□ 1.37
CDC42EP1-203ENST00000430687 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
CDC42EP1-203ENST00000430687 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.37
CDC42EP1-203ENST00000430687 TEX13AQ9BXU3 409 aaPredicted RBP23.58■■□□□ 1.37
CDC42EP1-203ENST00000430687 UBR2Q8IWV8 1755 aa23.57■■□□□ 1.36
CDC42EP1-203ENST00000430687 RREB1Q92766 1687 aa23.57■■□□□ 1.36
CDC42EP1-203ENST00000430687 KDM3BQ7LBC6 1761 aa23.56■■□□□ 1.36
CDC42EP1-203ENST00000430687 MBIPQ9NS73 344 aa23.56■■□□□ 1.36
CDC42EP1-203ENST00000430687 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
CDC42EP1-203ENST00000430687 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
CDC42EP1-203ENST00000430687 ITPK1Q13572 414 aa23.55■■□□□ 1.36
CDC42EP1-203ENST00000430687 CICQ96RK0 1608 aaPredicted RBP23.55■■□□□ 1.36
CDC42EP1-203ENST00000430687 KCNQ4P56696 695 aa23.54■■□□□ 1.36
CDC42EP1-203ENST00000430687 NBPF14Q5TI25 921 aa23.54■■□□□ 1.36
CDC42EP1-203ENST00000430687 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
CDC42EP1-203ENST00000430687 GIGYF1O75420 1035 aaPredicted RBP23.52■■□□□ 1.36
CDC42EP1-203ENST00000430687 E9PSI1 815 aa23.51■■□□□ 1.35
CDC42EP1-203ENST00000430687 STARD3NLO95772 234 aa23.51■■□□□ 1.35
CDC42EP1-203ENST00000430687 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
CDC42EP1-203ENST00000430687 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
CDC42EP1-203ENST00000430687 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
CDC42EP1-203ENST00000430687 HOXB7P09629 217 aa23.5■■□□□ 1.35
CDC42EP1-203ENST00000430687 CYP19A1P11511 503 aaPredicted RBP23.5■■□□□ 1.35
CDC42EP1-203ENST00000430687 ZBED9Q6R2W3 1325 aa23.5■■□□□ 1.35
CDC42EP1-203ENST00000430687 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
CDC42EP1-203ENST00000430687 NUP188Q5SRE5 1749 aa23.5■■□□□ 1.35
CDC42EP1-203ENST00000430687 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
CDC42EP1-203ENST00000430687 SPINK5Q9NQ38 1064 aaPredicted RBP23.49■■□□□ 1.35
CDC42EP1-203ENST00000430687 STK32BQ9NY57 414 aa23.49■■□□□ 1.35
CDC42EP1-203ENST00000430687 SOS1Q07889 1333 aaPredicted RBP23.49■■□□□ 1.35
CDC42EP1-203ENST00000430687 C5P01031 1676 aa23.48■■□□□ 1.35
CDC42EP1-203ENST00000430687 SLFN5Q08AF3 891 aa23.48■■□□□ 1.35
CDC42EP1-203ENST00000430687 SLC15A2Q16348 729 aa23.48■■□□□ 1.35
CDC42EP1-203ENST00000430687 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
CDC42EP1-203ENST00000430687 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
CDC42EP1-203ENST00000430687 TJP1Q07157 1748 aa23.47■■□□□ 1.35
CDC42EP1-203ENST00000430687 USP16Q9Y5T5 823 aa23.47■■□□□ 1.35
CDC42EP1-203ENST00000430687 CRKLP46109 303 aaKnown RBP23.46■■□□□ 1.35
CDC42EP1-203ENST00000430687 AK7Q96M32 723 aa23.46■■□□□ 1.35
CDC42EP1-203ENST00000430687 CHMP4AQ9BY43 222 aa23.46■■□□□ 1.35
CDC42EP1-203ENST00000430687 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms