RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SLFN5Q08AF3 891 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 FAM114A1Q8IWE2 563 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 SF3A1Q15459 793 aaKnown RBP8.8□□□□□ -1
SYNPO2-202ENST00000429713 JMYQ8N9B5 988 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 MED4Q9NPJ6 270 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 TSPOAP1O95153 1857 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 KDM5DQ9BY66 1539 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
SYNPO2-202ENST00000429713 SLC8A1P32418 973 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 IRX1P78414 480 aaPredicted RBP8.79□□□□□ -1
SYNPO2-202ENST00000429713 KINO60870 393 aaKnown RBP8.79□□□□□ -1
SYNPO2-202ENST00000429713 LRRCC1Q9C099 1032 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 CENPHQ9H3R5 247 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
SYNPO2-202ENST00000429713 AMPHP49418 695 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 SATB1Q01826 763 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 CEP83Q9Y592 693 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 MYH11P35749 1972 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 GNAI1P63096 354 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 SMARCE1Q969G3 411 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 CHD1O14646 1710 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 LRSAM1Q6UWE0 723 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 CRACR2AQ9BSW2 395 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 ZBTB17Q13105 803 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 SMC3Q9UQE7 1217 aa8.79□□□□□ -1
SYNPO2-202ENST00000429713 TTC36A6NLP5 189 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 MLECQ14165 292 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
SYNPO2-202ENST00000429713 NOLC1Q14978 699 aaKnown RBP eCLIP8.78□□□□□ -1
SYNPO2-202ENST00000429713 ANKRD1Q15327 319 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 EFCAB13Q8IY85 973 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 MAGI1Q96QZ7 1491 aaPredicted RBP8.78□□□□□ -1
SYNPO2-202ENST00000429713 LMNB2Q03252 620 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 FMNL2Q96PY5 1086 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 EIF4G3O43432 1585 aaKnown RBP8.78□□□□□ -1
SYNPO2-202ENST00000429713 ATF7IPQ6VMQ6 1270 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 TEX14Q8IWB6 1497 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 HDAC1Q13547 482 aaPredicted RBP8.78□□□□□ -1
SYNPO2-202ENST00000429713 KDM5CP41229 1560 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 ABCC11Q96J66 1382 aa8.78□□□□□ -1
SYNPO2-202ENST00000429713 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
SYNPO2-202ENST00000429713 ERLIN2O94905 339 aa8.77□□□□□ -1
SYNPO2-202ENST00000429713 CHD1LQ86WJ1 897 aa8.77□□□□□ -1
SYNPO2-202ENST00000429713 GPATCH11Q8N954 259 aa8.77□□□□□ -1
SYNPO2-202ENST00000429713 HMOX1P09601 288 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 RAI14Q9P0K7 980 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 P3H4Q92791 437 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 CDC42BPAQ5VT25 1732 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 SLU7O95391 586 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 BAG4O95429 457 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 SKAP1Q86WV1 359 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 HSPA4P34932 840 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 ANKS4BQ8N8V4 417 aa8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 NAP1L3Q99457 506 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-202ENST00000429713 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 RSPH14Q9UHP6 348 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 EPB41L2O43491 1005 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 GTF2F1P35269 517 aaKnown RBP eCLIP8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 ARFGAP2Q8N6H7 521 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 NLRP5P59047 1200 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 TMED1Q13445 227 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 ARMC9Q7Z3E5 817 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 EXOC4Q96A65 974 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 DDX19AQ9NUU7 478 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 CFAP45Q9UL16 551 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 KRT85P78386 507 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 CBX1P83916 185 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 BMP2KLQ5H9B9 411 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 GORABQ5T7V8 394 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 PSMD7P51665 324 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 SPECC1LQ69YQ0 1117 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 BICD2Q8TD16 824 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 ANKRD36BQ8N2N9 1353 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 MMS22LQ6ZRQ5 1243 aa8.76□□□□□ -1.01
SYNPO2-202ENST00000429713 HIP1O00291 1037 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 SRCIN1Q9C0H9 1055 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 ZNHIT6Q9NWK9 470 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 CROCC2H7BZ55 1655 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 RPGRIP1Q96KN7 1286 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 SH2B1Q9NRF2 756 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 WDR62O43379 1518 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 ZSCAN31Q96LW9 406 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 TSR2Q969E8 191 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 DUSP27Q5VZP5 1158 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 TICAM2Q86XR7 235 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 CCAR2Q8N163 923 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 FAM200AQ8TCP9 573 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 PSMA5P28066 241 aa8.75□□□□□ -1.01
SYNPO2-202ENST00000429713 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms