RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 TRIM27P14373 513 aa21.53■■□□□ 1.04
ABCF3-203ENST00000429586 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-203ENST00000429586 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-203ENST00000429586 RNMTO43148 476 aaKnown RBP21.52■■□□□ 1.04
ABCF3-203ENST00000429586 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-203ENST00000429586 TEFQ10587 303 aa21.51■■□□□ 1.03
ABCF3-203ENST00000429586 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
ABCF3-203ENST00000429586 ZMYND15Q9H091 742 aa21.51■■□□□ 1.03
ABCF3-203ENST00000429586 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
ABCF3-203ENST00000429586 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
ABCF3-203ENST00000429586 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
ABCF3-203ENST00000429586 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
ABCF3-203ENST00000429586 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
ABCF3-203ENST00000429586 ATF7IPQ6VMQ6 1270 aa21.49■■□□□ 1.03
ABCF3-203ENST00000429586 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
ABCF3-203ENST00000429586 ZNF428Q96B54 188 aa21.49■■□□□ 1.03
ABCF3-203ENST00000429586 KCNQ3O43525 872 aa21.49■■□□□ 1.03
ABCF3-203ENST00000429586 CYP27B1O15528 508 aa21.48■■□□□ 1.03
ABCF3-203ENST00000429586 PHKG2P15735 406 aa21.48■■□□□ 1.03
ABCF3-203ENST00000429586 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
ABCF3-203ENST00000429586 CARD10Q9BWT7 1032 aa21.48■■□□□ 1.03
ABCF3-203ENST00000429586 PARP4Q9UKK3 1724 aaKnown RBP21.48■■□□□ 1.03
ABCF3-203ENST00000429586 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
ABCF3-203ENST00000429586 SCN11AQ9UI33 1791 aa21.47■■□□□ 1.03
ABCF3-203ENST00000429586 OVOS2A0A0G2JMS6 1433 aa21.47■■□□□ 1.03
ABCF3-203ENST00000429586 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
ABCF3-203ENST00000429586 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
ABCF3-203ENST00000429586 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
ABCF3-203ENST00000429586 SIPA1L3O60292 1781 aaPredicted RBP21.45■■□□□ 1.02
ABCF3-203ENST00000429586 IFNL2Q8IZJ0 200 aa21.45■■□□□ 1.02
ABCF3-203ENST00000429586 CERKQ8TCT0 537 aa21.45■■□□□ 1.02
ABCF3-203ENST00000429586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.45■■□□□ 1.02
ABCF3-203ENST00000429586 PLCH1Q4KWH8 1693 aa21.45■■□□□ 1.02
ABCF3-203ENST00000429586 IPO8O15397 1037 aaKnown RBP21.44■■□□□ 1.02
ABCF3-203ENST00000429586 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
ABCF3-203ENST00000429586 IL2RBP14784 551 aa21.44■■□□□ 1.02
ABCF3-203ENST00000429586 TMEM57Q8N5G2 664 aa21.44■■□□□ 1.02
ABCF3-203ENST00000429586 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
ABCF3-203ENST00000429586 ITPRIPQ8IWB1 547 aa21.43■■□□□ 1.02
ABCF3-203ENST00000429586 BRPF1P55201 1214 aaPredicted RBP21.43■■□□□ 1.02
ABCF3-203ENST00000429586 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
ABCF3-203ENST00000429586 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
ABCF3-203ENST00000429586 DDX54Q8TDD1 881 aaKnown RBP21.42■■□□□ 1.02
ABCF3-203ENST00000429586 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
ABCF3-203ENST00000429586 SHANK3Q9BYB0 1731 aa21.41■■□□□ 1.02
ABCF3-203ENST00000429586 EIF4A1P60842 406 aaKnown RBP21.41■■□□□ 1.02
ABCF3-203ENST00000429586 NFATC2IPQ8NCF5 419 aa21.41■■□□□ 1.02
ABCF3-203ENST00000429586 RRAGDQ9NQL2 400 aaPredicted RBP21.41■■□□□ 1.02
ABCF3-203ENST00000429586 SLC39A6Q13433 755 aa21.4■■□□□ 1.02
ABCF3-203ENST00000429586 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
ABCF3-203ENST00000429586 G2E3Q7L622 706 aa21.4■■□□□ 1.02
ABCF3-203ENST00000429586 FRAT2O75474 233 aaPredicted RBP21.39■■□□□ 1.01
ABCF3-203ENST00000429586 SLC52A2Q9HAB3 445 aa21.39■■□□□ 1.01
ABCF3-203ENST00000429586 PCDH11XQ9BZA7 1347 aa21.38■■□□□ 1.01
ABCF3-203ENST00000429586 PCDH11YQ9BZA8 1340 aa21.38■■□□□ 1.01
ABCF3-203ENST00000429586 EIF2S2P20042 333 aaKnown RBP21.38■■□□□ 1.01
ABCF3-203ENST00000429586 SKAP1Q86WV1 359 aa21.38■■□□□ 1.01
ABCF3-203ENST00000429586 DCAF5Q96JK2 942 aa21.38■■□□□ 1.01
ABCF3-203ENST00000429586 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 NRAPQ86VF7 1730 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 KAT6BQ8WYB5 2073 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 PCDHB15Q9Y5E8 787 aa21.36■■□□□ 1.01
ABCF3-203ENST00000429586 RRP9O43818 475 aaKnown RBP21.35■■□□□ 1.01
ABCF3-203ENST00000429586 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
ABCF3-203ENST00000429586 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
ABCF3-203ENST00000429586 RGS12O14924 1447 aa21.34■■□□□ 1.01
ABCF3-203ENST00000429586 IGHDP01880 384 aa21.34■■□□□ 1.01
ABCF3-203ENST00000429586 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
ABCF3-203ENST00000429586 ABCC4O15439 1325 aa21.34■■□□□ 1.01
ABCF3-203ENST00000429586 KDM2BQ8NHM5 1336 aa21.34■■□□□ 1.01
ABCF3-203ENST00000429586 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
ABCF3-203ENST00000429586 HSP90AB1P08238 724 aaKnown RBP21.33■■□□□ 1.01
ABCF3-203ENST00000429586 CABP4P57796 275 aa21.33■■□□□ 1
ABCF3-203ENST00000429586 JCADQ9P266 1359 aa21.33■■□□□ 1
ABCF3-203ENST00000429586 ANXA1P04083 346 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 ZNF790Q6PG37 636 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 C8orf37Q96NL8 207 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 CACNA1FO60840 1977 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 F6X3S4 739 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 HSP90AA2PQ14568 343 aaPredicted RBP21.32■■□□□ 1
ABCF3-203ENST00000429586 MRC1P22897 1456 aa21.32■■□□□ 1
ABCF3-203ENST00000429586 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
ABCF3-203ENST00000429586 WNK3Q9BYP7 1800 aa21.31■■□□□ 1
ABCF3-203ENST00000429586 DISP2A7MBM2 1401 aa21.3■■□□□ 1
ABCF3-203ENST00000429586 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
ABCF3-203ENST00000429586 C5P01031 1676 aa21.3■■□□□ 1
ABCF3-203ENST00000429586 CHPF2Q9P2E5 772 aa21.3■■□□□ 1
ABCF3-203ENST00000429586 HSPA1LP34931 641 aa21.3■■□□□ 1
ABCF3-203ENST00000429586 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
ABCF3-203ENST00000429586 TOGARAM1Q9Y4F4 1720 aa21.3■■□□□ 1
ABCF3-203ENST00000429586 PTPRCP08575 1304 aa21.29■■□□□ 1
ABCF3-203ENST00000429586 FLIIQ13045 1269 aa21.29■■□□□ 1
ABCF3-203ENST00000429586 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
ABCF3-203ENST00000429586 CENPQQ7L2Z9 268 aaPredicted RBP21.29■■□□□ 1
ABCF3-203ENST00000429586 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
ABCF3-203ENST00000429586 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
ABCF3-203ENST00000429586 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms