RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
LINC00887-203ENST00000429578 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
LINC00887-203ENST00000429578 KDM3BQ7LBC6 1761 aa22.24■■□□□ 1.15
LINC00887-203ENST00000429578 MRC1P22897 1456 aa22.23■■□□□ 1.15
LINC00887-203ENST00000429578 TRMT2AQ8IZ69 625 aaKnown RBP22.23■■□□□ 1.15
LINC00887-203ENST00000429578 CFAP44Q96MT7 982 aa22.23■■□□□ 1.15
LINC00887-203ENST00000429578 GNAI1P63096 354 aa22.23■■□□□ 1.15
LINC00887-203ENST00000429578 MYH16Q9H6N6 1097 aa22.23■■□□□ 1.15
LINC00887-203ENST00000429578 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
LINC00887-203ENST00000429578 TEFQ10587 303 aa22.22■■□□□ 1.15
LINC00887-203ENST00000429578 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
LINC00887-203ENST00000429578 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
LINC00887-203ENST00000429578 MARCH10Q8NA82 808 aaPredicted RBP22.21■■□□□ 1.15
LINC00887-203ENST00000429578 EN1Q05925 392 aaPredicted RBP22.2■■□□□ 1.14
LINC00887-203ENST00000429578 LAS1LQ9Y4W2 734 aaKnown RBP22.2■■□□□ 1.14
LINC00887-203ENST00000429578 TAF7Q15545 349 aaPredicted RBP22.2■■□□□ 1.14
LINC00887-203ENST00000429578 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
LINC00887-203ENST00000429578 CHL1O00533 1208 aa22.19■■□□□ 1.14
LINC00887-203ENST00000429578 TRIM37O94972 964 aa22.19■■□□□ 1.14
LINC00887-203ENST00000429578 SLC52A2Q9HAB3 445 aa22.19■■□□□ 1.14
LINC00887-203ENST00000429578 SBF2Q86WG5 1849 aa22.18■■□□□ 1.14
LINC00887-203ENST00000429578 FANCIQ9NVI1 1328 aa22.18■■□□□ 1.14
LINC00887-203ENST00000429578 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
LINC00887-203ENST00000429578 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
LINC00887-203ENST00000429578 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
LINC00887-203ENST00000429578 NFATC2IPQ8NCF5 419 aa22.17■■□□□ 1.14
LINC00887-203ENST00000429578 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
LINC00887-203ENST00000429578 TNS1Q9HBL0 1735 aaKnown RBP22.16■■□□□ 1.14
LINC00887-203ENST00000429578 CABP4P57796 275 aa22.16■■□□□ 1.14
LINC00887-203ENST00000429578 PAPPAQ13219 1627 aa22.15■■□□□ 1.14
LINC00887-203ENST00000429578 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.14
LINC00887-203ENST00000429578 TSPYL4Q9UJ04 414 aa22.14■■□□□ 1.14
LINC00887-203ENST00000429578 BTBD11A6QL63 1104 aa22.14■■□□□ 1.13
LINC00887-203ENST00000429578 APBA3O96018 575 aa22.13■■□□□ 1.13
LINC00887-203ENST00000429578 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
LINC00887-203ENST00000429578 UBR2Q8IWV8 1755 aa22.13■■□□□ 1.13
LINC00887-203ENST00000429578 BCL9O00512 1426 aa22.13■■□□□ 1.13
LINC00887-203ENST00000429578 NHSQ6T4R5 1651 aa22.12■■□□□ 1.13
LINC00887-203ENST00000429578 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
LINC00887-203ENST00000429578 PSDA5PKW4 1024 aaPredicted RBP22.09■■□□□ 1.13
LINC00887-203ENST00000429578 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
LINC00887-203ENST00000429578 CAMKK2Q96RR4 588 aa22.09■■□□□ 1.13
LINC00887-203ENST00000429578 PRIM1P49642 420 aaKnown RBP22.08■■□□□ 1.12
LINC00887-203ENST00000429578 ZNF790Q6PG37 636 aa22.08■■□□□ 1.12
LINC00887-203ENST00000429578 BTAF1O14981 1849 aa22.08■■□□□ 1.12
LINC00887-203ENST00000429578 PIGBQ92521 554 aa22.07■■□□□ 1.12
LINC00887-203ENST00000429578 SYTL4Q96C24 671 aaPredicted RBP22.07■■□□□ 1.12
LINC00887-203ENST00000429578 ACSBG1Q96GR2 724 aa22.07■■□□□ 1.12
LINC00887-203ENST00000429578 KCNQ3O43525 872 aa22.06■■□□□ 1.12
LINC00887-203ENST00000429578 CT47B1P0C2W7 299 aaPredicted RBP22.06■■□□□ 1.12
LINC00887-203ENST00000429578 SLC39A6Q13433 755 aa22.06■■□□□ 1.12
LINC00887-203ENST00000429578 CACNA1FO60840 1977 aa22.05■■□□□ 1.12
LINC00887-203ENST00000429578 EIF4A1P60842 406 aaKnown RBP22.05■■□□□ 1.12
LINC00887-203ENST00000429578 TTC5Q8N0Z6 440 aa22.05■■□□□ 1.12
LINC00887-203ENST00000429578 C8orf58Q8NAV2 365 aa22.05■■□□□ 1.12
LINC00887-203ENST00000429578 C5P01031 1676 aa22.04■■□□□ 1.12
LINC00887-203ENST00000429578 R3HDM1Q15032 1099 aaKnown RBP22.03■■□□□ 1.12
LINC00887-203ENST00000429578 KCPQ6ZWJ8 1503 aa22.03■■□□□ 1.12
LINC00887-203ENST00000429578 HEG1Q9ULI3 1381 aa22.03■■□□□ 1.12
LINC00887-203ENST00000429578 KRT24Q2M2I5 525 aa22.03■■□□□ 1.12
LINC00887-203ENST00000429578 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
LINC00887-203ENST00000429578 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
LINC00887-203ENST00000429578 LAMB4A4D0S4 1761 aa22.02■■□□□ 1.12
LINC00887-203ENST00000429578 KCNQ2O43526 872 aa22.02■■□□□ 1.12
LINC00887-203ENST00000429578 SOS1Q07889 1333 aaPredicted RBP22.01■■□□□ 1.11
LINC00887-203ENST00000429578 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
LINC00887-203ENST00000429578 VAMP4O75379 141 aa22.01■■□□□ 1.11
LINC00887-203ENST00000429578 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
LINC00887-203ENST00000429578 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
LINC00887-203ENST00000429578 ZNF428Q96B54 188 aa22■■□□□ 1.11
LINC00887-203ENST00000429578 ASAP1Q9ULH1 1129 aa22■■□□□ 1.11
LINC00887-203ENST00000429578 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
LINC00887-203ENST00000429578 FMNL2Q96PY5 1086 aa22■■□□□ 1.11
LINC00887-203ENST00000429578 RREB1Q92766 1687 aa21.99■■□□□ 1.11
LINC00887-203ENST00000429578 HOXB7P09629 217 aa21.98■■□□□ 1.11
LINC00887-203ENST00000429578 BCL11BQ9C0K0 894 aaPredicted RBP21.98■■□□□ 1.11
LINC00887-203ENST00000429578 ZNF831Q5JPB2 1677 aa21.98■■□□□ 1.11
LINC00887-203ENST00000429578 GIGYF1O75420 1035 aaPredicted RBP21.97■■□□□ 1.11
LINC00887-203ENST00000429578 LY75O60449 1722 aa21.97■■□□□ 1.11
LINC00887-203ENST00000429578 NBPF14Q5TI25 921 aa21.97■■□□□ 1.11
LINC00887-203ENST00000429578 LRP5O75197 1615 aa21.96■■□□□ 1.11
LINC00887-203ENST00000429578 CICQ96RK0 1608 aaPredicted RBP21.96■■□□□ 1.11
LINC00887-203ENST00000429578 PTF1AQ7RTS3 328 aa21.96■■□□□ 1.11
LINC00887-203ENST00000429578 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
LINC00887-203ENST00000429578 PLSCR1O15162 318 aa21.95■■□□□ 1.1
LINC00887-203ENST00000429578 PTCD1O75127 700 aaKnown RBP21.95■■□□□ 1.1
LINC00887-203ENST00000429578 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
LINC00887-203ENST00000429578 TJP1Q07157 1748 aa21.95■■□□□ 1.1
LINC00887-203ENST00000429578 SNRPA1P09661 255 aaKnown RBP21.94■■□□□ 1.1
LINC00887-203ENST00000429578 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
LINC00887-203ENST00000429578 ALDH1L2Q3SY69 923 aa21.94■■□□□ 1.1
LINC00887-203ENST00000429578 PALLDQ8WX93 1383 aa21.93■■□□□ 1.1
LINC00887-203ENST00000429578 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
LINC00887-203ENST00000429578 CHMP4AQ9BY43 222 aa21.93■■□□□ 1.1
LINC00887-203ENST00000429578 PRAMEF22A3QJZ6 481 aa21.92■■□□□ 1.1
LINC00887-203ENST00000429578 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
LINC00887-203ENST00000429578 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
LINC00887-203ENST00000429578 RGPD3A6NKT7 1758 aaPredicted RBP21.91■■□□□ 1.1
LINC00887-203ENST00000429578 RGPD4Q7Z3J3 1758 aa21.91■■□□□ 1.1
LINC00887-203ENST00000429578 HDGFL1Q5TGJ6 251 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms