RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
LINC01238-203ENST00000429456 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
LINC01238-203ENST00000429456 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
LINC01238-203ENST00000429456 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 AMPHP49418 695 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 STK31Q9BXU1 1019 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 AMOTL2Q9Y2J4 779 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 DIP2AQ14689 1571 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 LMBRD1Q9NUN5 540 aa14.1□□□□□ -0.15
LINC01238-203ENST00000429456 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
LINC01238-203ENST00000429456 ESPNB1AK53 854 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 FLIIQ13045 1269 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 PKP1Q13835 747 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 ZGPATQ8N5A5 531 aaKnown RBP14.09□□□□□ -0.15
LINC01238-203ENST00000429456 EXOC6BQ9Y2D4 811 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 GNAI3P08754 354 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 ATP8B2P98198 1209 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 CCDC30Q5VVM6 783 aa14.09□□□□□ -0.15
LINC01238-203ENST00000429456 NGDNQ8NEJ9 315 aaKnown RBP14.09□□□□□ -0.15
LINC01238-203ENST00000429456 ZNF445P59923 1031 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 LRRCC1Q9C099 1032 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 TBX22Q9Y458 520 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
LINC01238-203ENST00000429456 ERBB4Q15303 1308 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 SLIT1O75093 1534 aa14.08□□□□□ -0.16
LINC01238-203ENST00000429456 GNAT3A8MTJ3 354 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 ZDHHC9Q9Y397 364 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 PNMA6EA0A0J9YXQ4 647 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
LINC01238-203ENST00000429456 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
LINC01238-203ENST00000429456 PPP1R9BQ96SB3 815 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
LINC01238-203ENST00000429456 MARF1Q9Y4F3 1742 aaKnown RBP14.06□□□□□ -0.16
LINC01238-203ENST00000429456 MX1P20591 662 aa14.06□□□□□ -0.16
LINC01238-203ENST00000429456 NASPP49321 788 aaPredicted RBP14.06□□□□□ -0.16
LINC01238-203ENST00000429456 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
LINC01238-203ENST00000429456 STAP2Q9UGK3 403 aa14.06□□□□□ -0.16
LINC01238-203ENST00000429456 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
LINC01238-203ENST00000429456 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
LINC01238-203ENST00000429456 HOXC9P31274 260 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 TSHZ3Q63HK5 1081 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 MAP3K5Q99683 1374 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 CHMLP26374 656 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 MCM2P49736 904 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
LINC01238-203ENST00000429456 NEK4P51957 841 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 NLRP6P59044 892 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
LINC01238-203ENST00000429456 IL17RAQ96F46 866 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 TMX3Q96JJ7 454 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 SRCIN1Q9C0H9 1055 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 ANKARQ7Z5J8 1434 aa14.04□□□□□ -0.16
LINC01238-203ENST00000429456 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
LINC01238-203ENST00000429456 ANAPC15P60006 121 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 TAF7Q15545 349 aaPredicted RBP14.03□□□□□ -0.16
LINC01238-203ENST00000429456 LRRFIP2Q9Y608 721 aaKnown RBP14.03□□□□□ -0.16
LINC01238-203ENST00000429456 AOX1Q06278 1338 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 PRPF40AO75400 957 aaKnown RBP14.03□□□□□ -0.16
LINC01238-203ENST00000429456 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
LINC01238-203ENST00000429456 MCCP23508 829 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 CUL4AQ13619 759 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
LINC01238-203ENST00000429456 GPT2Q8TD30 523 aa14.02□□□□□ -0.16
LINC01238-203ENST00000429456 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.16
LINC01238-203ENST00000429456 PALD1Q9ULE6 856 aa14.02□□□□□ -0.16
LINC01238-203ENST00000429456 SSH3Q8TE77 659 aa14.01□□□□□ -0.17
LINC01238-203ENST00000429456 ANP32BQ92688 251 aaKnown RBP14.01□□□□□ -0.17
LINC01238-203ENST00000429456 RILPL2Q969X0 211 aa14.01□□□□□ -0.17
LINC01238-203ENST00000429456 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
LINC01238-203ENST00000429456 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
LINC01238-203ENST00000429456 EPB41L2O43491 1005 aaKnown RBP14□□□□□ -0.17
LINC01238-203ENST00000429456 BRD1O95696 1058 aa14□□□□□ -0.17
LINC01238-203ENST00000429456 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
LINC01238-203ENST00000429456 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
LINC01238-203ENST00000429456 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
LINC01238-203ENST00000429456 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
LINC01238-203ENST00000429456 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
LINC01238-203ENST00000429456 RAB11FIP3O75154 756 aa13.99□□□□□ -0.17
LINC01238-203ENST00000429456 POLA2Q14181 598 aa13.99□□□□□ -0.17
LINC01238-203ENST00000429456 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
LINC01238-203ENST00000429456 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
LINC01238-203ENST00000429456 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
LINC01238-203ENST00000429456 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
LINC01238-203ENST00000429456 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
LINC01238-203ENST00000429456 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
LINC01238-203ENST00000429456 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
LINC01238-203ENST00000429456 ABTB2Q8N961 1025 aa13.98□□□□□ -0.17
LINC01238-203ENST00000429456 LTV1Q96GA3 475 aaPredicted RBP13.98□□□□□ -0.17
LINC01238-203ENST00000429456 TMEM63CQ9P1W3 806 aa13.98□□□□□ -0.17
LINC01238-203ENST00000429456 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
LINC01238-203ENST00000429456 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
LINC01238-203ENST00000429456 IL1RAPL2Q9NP60 686 aa13.97□□□□□ -0.17
LINC01238-203ENST00000429456 MED1Q15648 1581 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms