RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 PTCH1Q13635 1447 aa17.91■□□□□ 0.46
MARK3-205ENST00000429436 MAP4K4O95819 1239 aaPredicted RBP17.91■□□□□ 0.46
MARK3-205ENST00000429436 BCCIPQ9P287 314 aaKnown RBP eCLIP17.91■□□□□ 0.46
MARK3-205ENST00000429436 ALKQ9UM73 1620 aa17.91■□□□□ 0.46
MARK3-205ENST00000429436 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
MARK3-205ENST00000429436 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
MARK3-205ENST00000429436 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
MARK3-205ENST00000429436 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 PLCB2Q00722 1185 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 DMTNQ08495 405 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 ZSCAN23Q3MJ62 389 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 RPAP2Q8IXW5 612 aaPredicted RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 NOL7Q9UMY1 257 aaKnown RBP17.9■□□□□ 0.46
MARK3-205ENST00000429436 MED14O60244 1454 aa17.9■□□□□ 0.46
MARK3-205ENST00000429436 KLHL40Q2TBA0 621 aa17.89■□□□□ 0.45
MARK3-205ENST00000429436 SYCE3A1L190 88 aa17.89■□□□□ 0.45
MARK3-205ENST00000429436 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
MARK3-205ENST00000429436 NUCB2P80303 420 aa17.89■□□□□ 0.45
MARK3-205ENST00000429436 CCDC94Q9BW85 323 aaPredicted RBP17.89■□□□□ 0.45
MARK3-205ENST00000429436 IL1RAPL2Q9NP60 686 aa17.89■□□□□ 0.45
MARK3-205ENST00000429436 DIP2CQ9Y2E4 1556 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 GDPD2Q9HCC8 539 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 ACEP12821 1306 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 REC8O95072 547 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 NSFL1CQ9UNZ2 370 aaKnown RBP17.88■□□□□ 0.45
MARK3-205ENST00000429436 ZKSCAN5Q9Y2L8 839 aa17.88■□□□□ 0.45
MARK3-205ENST00000429436 ERC2O15083 957 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 SASS6Q6UVJ0 657 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 CHL1O00533 1208 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 HMMRO75330 724 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 FAM193AP78312 1265 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 AMPHP49418 695 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
MARK3-205ENST00000429436 LMBRD1Q9NUN5 540 aa17.87■□□□□ 0.45
MARK3-205ENST00000429436 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
MARK3-205ENST00000429436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
MARK3-205ENST00000429436 PDE1AP54750 535 aa17.86■□□□□ 0.45
MARK3-205ENST00000429436 ATP2B3Q16720 1220 aa17.86■□□□□ 0.45
MARK3-205ENST00000429436 STK31Q9BXU1 1019 aa17.86■□□□□ 0.45
MARK3-205ENST00000429436 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
MARK3-205ENST00000429436 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
MARK3-205ENST00000429436 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
MARK3-205ENST00000429436 CPS1P31327 1500 aa17.85■□□□□ 0.45
MARK3-205ENST00000429436 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
MARK3-205ENST00000429436 TTC21BQ7Z4L5 1316 aa17.84■□□□□ 0.45
MARK3-205ENST00000429436 PNMA6EA0A0J9YXQ4 647 aa17.84■□□□□ 0.45
MARK3-205ENST00000429436 PTMSP20962 102 aa17.84■□□□□ 0.45
MARK3-205ENST00000429436 GPT2Q8TD30 523 aa17.84■□□□□ 0.45
MARK3-205ENST00000429436 TMEM131LA2VDJ0 1609 aa17.84■□□□□ 0.45
MARK3-205ENST00000429436 ZNF771Q7L3S4 317 aaPredicted RBP17.83■□□□□ 0.45
MARK3-205ENST00000429436 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.45
MARK3-205ENST00000429436 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.45
MARK3-205ENST00000429436 ZDHHC9Q9Y397 364 aa17.83■□□□□ 0.45
MARK3-205ENST00000429436 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.45
MARK3-205ENST00000429436 TMX3Q96JJ7 454 aa17.83■□□□□ 0.44
MARK3-205ENST00000429436 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
MARK3-205ENST00000429436 ZNF500O60304 480 aaPredicted RBP17.82■□□□□ 0.44
MARK3-205ENST00000429436 GNAI2P04899 355 aa17.82■□□□□ 0.44
MARK3-205ENST00000429436 KCNJ4P48050 445 aa17.82■□□□□ 0.44
MARK3-205ENST00000429436 CSPP1Q1MSJ5 1256 aa17.82■□□□□ 0.44
MARK3-205ENST00000429436 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
MARK3-205ENST00000429436 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
MARK3-205ENST00000429436 MTERF4Q7Z6M4 381 aaKnown RBP17.81■□□□□ 0.44
MARK3-205ENST00000429436 UNC5CLQ8IV45 518 aa17.81■□□□□ 0.44
MARK3-205ENST00000429436 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
MARK3-205ENST00000429436 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
MARK3-205ENST00000429436 NEO1Q92859 1461 aa17.81■□□□□ 0.44
MARK3-205ENST00000429436 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
MARK3-205ENST00000429436 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
MARK3-205ENST00000429436 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
MARK3-205ENST00000429436 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
MARK3-205ENST00000429436 ATP7BP35670 1465 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 MX1P20591 662 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 TERF1P54274 439 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 TTC12Q9H892 705 aaPredicted RBP17.79■□□□□ 0.44
MARK3-205ENST00000429436 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
MARK3-205ENST00000429436 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.441e-7■■■□□ 18
MARK3-205ENST00000429436 CEBPAP49715 358 aaPredicted RBP17.79■□□□□ 0.44
MARK3-205ENST00000429436 ZNF710Q8N1W2 664 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
MARK3-205ENST00000429436 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
MARK3-205ENST00000429436 PREX1Q8TCU6 1659 aa17.79■□□□□ 0.44
MARK3-205ENST00000429436 HSP90B1P14625 803 aaKnown RBP17.78■□□□□ 0.44
MARK3-205ENST00000429436 FLIIQ13045 1269 aa17.78■□□□□ 0.44
MARK3-205ENST00000429436 PTPRCP08575 1304 aa17.78■□□□□ 0.44
MARK3-205ENST00000429436 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
MARK3-205ENST00000429436 ANXA1P04083 346 aa17.77■□□□□ 0.44
MARK3-205ENST00000429436 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
MARK3-205ENST00000429436 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.44
MARK3-205ENST00000429436 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
MARK3-205ENST00000429436 ZNF526Q8TF50 670 aaPredicted RBP17.77■□□□□ 0.44
MARK3-205ENST00000429436 EYA1Q99502 592 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms