RNA–Protein interactions for RNA: ENST00000428881.1

RPL4P3-201, Transcript of ribosomal protein L4 pseudogene 3, humanhuman

BASIC

Gene RPL4P3, Length 1,311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4P3-201ENST00000428881 ARXQ96QS3 562 aa11.54□□□□□ -0.56
RPL4P3-201ENST00000428881 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
RPL4P3-201ENST00000428881 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
RPL4P3-201ENST00000428881 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
RPL4P3-201ENST00000428881 PTCD1O75127 700 aaKnown RBP11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
RPL4P3-201ENST00000428881 ITPK1Q13572 414 aa11.51□□□□□ -0.57
RPL4P3-201ENST00000428881 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
RPL4P3-201ENST00000428881 FLAD1Q8NFF5 587 aa11.51□□□□□ -0.57
RPL4P3-201ENST00000428881 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
RPL4P3-201ENST00000428881 GNPATO15228 680 aa11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 U2AF1L5P0DN76 240 aaPredicted RBP11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 U2AF1Q01081 240 aaKnown RBP eCLIP11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
RPL4P3-201ENST00000428881 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
RPL4P3-201ENST00000428881 KDRP35968 1356 aa11.49□□□□□ -0.57
RPL4P3-201ENST00000428881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
RPL4P3-201ENST00000428881 PLEKHG2Q9H7P9 1386 aa11.48□□□□□ -0.57
RPL4P3-201ENST00000428881 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
RPL4P3-201ENST00000428881 KDM6AO15550 1401 aaPredicted RBP11.48□□□□□ -0.57
RPL4P3-201ENST00000428881 CASZ1Q86V15 1759 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 TRAPPC3LQ5T215 181 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 ITGB4P16144 1822 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 PAPPAQ13219 1627 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 LY75O60449 1722 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 TOGARAM1Q9Y4F4 1720 aa11.47□□□□□ -0.57
RPL4P3-201ENST00000428881 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
RPL4P3-201ENST00000428881 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
RPL4P3-201ENST00000428881 SSFA2P28290 1259 aa11.45□□□□□ -0.58
RPL4P3-201ENST00000428881 TEFQ10587 303 aa11.45□□□□□ -0.58
RPL4P3-201ENST00000428881 GPR162Q16538 588 aa11.45□□□□□ -0.58
RPL4P3-201ENST00000428881 FCHSD2O94868 740 aa11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 NEFMP07197 916 aa11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 RFC4P35249 363 aa11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
RPL4P3-201ENST00000428881 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 YY1P25490 414 aa11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 DNAJC10Q8IXB1 793 aa11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
RPL4P3-201ENST00000428881 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
RPL4P3-201ENST00000428881 COL3A1P02461 1466 aaPredicted RBP11.42□□□□□ -0.58
RPL4P3-201ENST00000428881 RALBP1Q15311 655 aa11.41□□□□□ -0.58
RPL4P3-201ENST00000428881 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
RPL4P3-201ENST00000428881 C5P01031 1676 aa11.41□□□□□ -0.58
RPL4P3-201ENST00000428881 C4BP0C0L5 1744 aa11.41□□□□□ -0.58
RPL4P3-201ENST00000428881 CNTNAP4Q9C0A0 1308 aa11.41□□□□□ -0.58
RPL4P3-201ENST00000428881 BTBD11A6QL63 1104 aa11.4□□□□□ -0.58
RPL4P3-201ENST00000428881 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
RPL4P3-201ENST00000428881 INTS5Q6P9B9 1019 aaKnown RBP11.4□□□□□ -0.58
RPL4P3-201ENST00000428881 MCM10Q7L590 875 aa11.4□□□□□ -0.58
RPL4P3-201ENST00000428881 NLGN1Q8N2Q7 840 aa11.4□□□□□ -0.58
RPL4P3-201ENST00000428881 MMP10P09238 476 aa11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 SRP68Q9UHB9 627 aaKnown RBP11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
RPL4P3-201ENST00000428881 ZPR1O75312 459 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 STARD3NLO95772 234 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 CYP19A1P11511 503 aaPredicted RBP11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 CD2APQ9Y5K6 639 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
RPL4P3-201ENST00000428881 KCNQ3O43525 872 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 GYS1P13807 737 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 PARP3Q9Y6F1 533 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
RPL4P3-201ENST00000428881 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
RPL4P3-201ENST00000428881 TEX13AQ9BXU3 409 aaPredicted RBP11.36□□□□□ -0.59
RPL4P3-201ENST00000428881 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
RPL4P3-201ENST00000428881 MAPK8IP3Q9UPT6 1336 aa11.36□□□□□ -0.59
RPL4P3-201ENST00000428881 HTATSF1O43719 755 aaKnown RBP11.35□□□□□ -0.59
RPL4P3-201ENST00000428881 FKBP8Q14318 412 aa11.35□□□□□ -0.59
RPL4P3-201ENST00000428881 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms