RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 C20orf194Q5TEA3 1177 aa11.51□□□□□ -0.57
SMC6-204ENST00000428868 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
SMC6-204ENST00000428868 NGLY1Q96IV0 654 aa11.51□□□□□ -0.57
SMC6-204ENST00000428868 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
SMC6-204ENST00000428868 UNC5CLQ8IV45 518 aa11.5□□□□□ -0.57
SMC6-204ENST00000428868 FNBP4Q8N3X1 1017 aaPredicted RBP11.5□□□□□ -0.57
SMC6-204ENST00000428868 TSPYL4Q9UJ04 414 aa11.5□□□□□ -0.57
SMC6-204ENST00000428868 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
SMC6-204ENST00000428868 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
SMC6-204ENST00000428868 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
SMC6-204ENST00000428868 VAMP4O75379 141 aa11.49□□□□□ -0.57
SMC6-204ENST00000428868 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
SMC6-204ENST00000428868 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
SMC6-204ENST00000428868 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
SMC6-204ENST00000428868 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
SMC6-204ENST00000428868 AFF2P51816 1311 aa11.49□□□□□ -0.57
SMC6-204ENST00000428868 TWISTNBQ3B726 338 aaPredicted RBP11.48□□□□□ -0.57
SMC6-204ENST00000428868 USP21Q9UK80 565 aa11.48□□□□□ -0.57
SMC6-204ENST00000428868 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
SMC6-204ENST00000428868 ATRNO75882 1429 aa11.48□□□□□ -0.57
SMC6-204ENST00000428868 KCPQ6ZWJ8 1503 aa11.48□□□□□ -0.57
SMC6-204ENST00000428868 TJP1Q07157 1748 aa11.48□□□□□ -0.57
SMC6-204ENST00000428868 BTAF1O14981 1849 aa11.48□□□□□ -0.57
SMC6-204ENST00000428868 NEFLP07196 543 aa11.47□□□□□ -0.57
SMC6-204ENST00000428868 TEFQ10587 303 aa11.47□□□□□ -0.57
SMC6-204ENST00000428868 VPS72Q15906 364 aa11.47□□□□□ -0.57
SMC6-204ENST00000428868 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
SMC6-204ENST00000428868 NHSQ6T4R5 1651 aa11.46□□□□□ -0.57
SMC6-204ENST00000428868 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
SMC6-204ENST00000428868 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
SMC6-204ENST00000428868 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.57
SMC6-204ENST00000428868 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
SMC6-204ENST00000428868 DCAF5Q96JK2 942 aa11.46□□□□□ -0.57
SMC6-204ENST00000428868 SMC4Q9NTJ3 1288 aa11.46□□□□□ -0.57
SMC6-204ENST00000428868 BTBD11A6QL63 1104 aa11.45□□□□□ -0.58
SMC6-204ENST00000428868 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
SMC6-204ENST00000428868 EIF4A1P60842 406 aaKnown RBP11.45□□□□□ -0.58
SMC6-204ENST00000428868 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
SMC6-204ENST00000428868 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
SMC6-204ENST00000428868 NFATC2IPQ8NCF5 419 aa11.45□□□□□ -0.58
SMC6-204ENST00000428868 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
SMC6-204ENST00000428868 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
SMC6-204ENST00000428868 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 HSP90AB1P08238 724 aaKnown RBP11.44□□□□□ -0.58
SMC6-204ENST00000428868 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
SMC6-204ENST00000428868 CRBNQ96SW2 442 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 BABAM1Q9NWV8 329 aa11.44□□□□□ -0.58
SMC6-204ENST00000428868 RGS12O14924 1447 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
SMC6-204ENST00000428868 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 HEG1Q9ULI3 1381 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 RLBP1P12271 317 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 RXRBP28702 533 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 ALDH1L2Q3SY69 923 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 MARCH10Q8NA82 808 aaPredicted RBP11.43□□□□□ -0.58
SMC6-204ENST00000428868 TAF1LQ8IZX4 1826 aa11.43□□□□□ -0.58
SMC6-204ENST00000428868 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
SMC6-204ENST00000428868 EXOC5O00471 708 aa11.42□□□□□ -0.58
SMC6-204ENST00000428868 CABP4P57796 275 aa11.42□□□□□ -0.58
SMC6-204ENST00000428868 DDB1Q16531 1140 aa11.42□□□□□ -0.58
SMC6-204ENST00000428868 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
SMC6-204ENST00000428868 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
SMC6-204ENST00000428868 CICQ96RK0 1608 aaPredicted RBP11.42□□□□□ -0.58
SMC6-204ENST00000428868 LY75O60449 1722 aa11.41□□□□□ -0.58
SMC6-204ENST00000428868 ZNF790Q6PG37 636 aa11.41□□□□□ -0.58
SMC6-204ENST00000428868 G2E3Q7L622 706 aa11.41□□□□□ -0.58
SMC6-204ENST00000428868 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
SMC6-204ENST00000428868 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.58
SMC6-204ENST00000428868 TRIM27P14373 513 aa11.4□□□□□ -0.58
SMC6-204ENST00000428868 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
SMC6-204ENST00000428868 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
SMC6-204ENST00000428868 ZNF496Q96IT1 587 aaPredicted RBP11.4□□□□□ -0.58
SMC6-204ENST00000428868 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
SMC6-204ENST00000428868 BCL9O00512 1426 aa11.4□□□□□ -0.58
SMC6-204ENST00000428868 RREB1Q92766 1687 aa11.4□□□□□ -0.59
SMC6-204ENST00000428868 ANXA1P04083 346 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
SMC6-204ENST00000428868 FAM182BQ5T319 152 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 POTEDQ86YR6 584 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
SMC6-204ENST00000428868 PIGBQ92521 554 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 ZNF428Q96B54 188 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
SMC6-204ENST00000428868 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
SMC6-204ENST00000428868 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 A0A0G2JS52 829 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
SMC6-204ENST00000428868 EIF2S2P20042 333 aaKnown RBP11.38□□□□□ -0.59
SMC6-204ENST00000428868 MYT1Q01538 1121 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 HDGFL1Q5TGJ6 251 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 QTRT2Q9H974 415 aaKnown RBP11.38□□□□□ -0.59
SMC6-204ENST00000428868 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 COG6Q9Y2V7 657 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms