RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PEAK1Q9H792 1746 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 AMOTL2Q9Y2J4 779 aa10.82□□□□□ -0.68
CDH13-202ENST00000428848 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.81□□□□□ -0.68
CDH13-202ENST00000428848 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 MCTP1Q6DN14 999 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 MEIS3Q99687 375 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 TTC21BQ7Z4L5 1316 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 PRR36Q9H6K5 1346 aa10.81□□□□□ -0.68
CDH13-202ENST00000428848 SMARCA5O60264 1052 aaPredicted RBP10.8□□□□□ -0.68
CDH13-202ENST00000428848 ST18O60284 1047 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 HS1BP3Q53T59 392 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 PDLIM2Q96JY6 352 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 ACEP12821 1306 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 REC8O95072 547 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 ZGPATQ8N5A5 531 aaKnown RBP10.8□□□□□ -0.68
CDH13-202ENST00000428848 SALL3Q9BXA9 1300 aa10.8□□□□□ -0.68
CDH13-202ENST00000428848 USP6P35125 1406 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 XRN1Q8IZH2 1706 aaKnown RBP10.79□□□□□ -0.68
CDH13-202ENST00000428848 ERC2O15083 957 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 CACNA1FO60840 1977 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 CAVIN1Q6NZI2 390 aaKnown RBP10.79□□□□□ -0.68
CDH13-202ENST00000428848 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 RBSNQ9H1K0 784 aa10.79□□□□□ -0.68
CDH13-202ENST00000428848 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
CDH13-202ENST00000428848 ANKARQ7Z5J8 1434 aa10.78□□□□□ -0.68
CDH13-202ENST00000428848 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
CDH13-202ENST00000428848 PDE1AP54750 535 aa10.78□□□□□ -0.68
CDH13-202ENST00000428848 MCM10Q7L590 875 aa10.78□□□□□ -0.68
CDH13-202ENST00000428848 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
CDH13-202ENST00000428848 N4BP2Q86UW6 1770 aaPredicted RBP10.78□□□□□ -0.68
CDH13-202ENST00000428848 CEP170BQ9Y4F5 1589 aaPredicted RBP10.78□□□□□ -0.68
CDH13-202ENST00000428848 ANP32BQ92688 251 aaKnown RBP10.77□□□□□ -0.68
CDH13-202ENST00000428848 ZNF142P52746 1687 aaPredicted RBP10.77□□□□□ -0.69
CDH13-202ENST00000428848 FMN2Q9NZ56 1722 aa10.77□□□□□ -0.69
CDH13-202ENST00000428848 HMMRO75330 724 aa10.77□□□□□ -0.69
CDH13-202ENST00000428848 NGDNQ8NEJ9 315 aaKnown RBP10.77□□□□□ -0.69
CDH13-202ENST00000428848 ZNF335Q9H4Z2 1342 aaPredicted RBP10.77□□□□□ -0.69
CDH13-202ENST00000428848 PTPRUQ92729 1446 aa10.77□□□□□ -0.69
CDH13-202ENST00000428848 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 PRPF40AO75400 957 aaKnown RBP10.76□□□□□ -0.69
CDH13-202ENST00000428848 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
CDH13-202ENST00000428848 CUL4AQ13619 759 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 SSH2Q76I76 1423 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 CCT4P50991 539 aaKnown RBP10.76□□□□□ -0.69
CDH13-202ENST00000428848 G2E3Q7L622 706 aa10.76□□□□□ -0.69
CDH13-202ENST00000428848 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
CDH13-202ENST00000428848 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
CDH13-202ENST00000428848 ZNF500O60304 480 aaPredicted RBP10.75□□□□□ -0.69
CDH13-202ENST00000428848 BRD1O95696 1058 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 MCM2P49736 904 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 HSP90AB2PQ58FF8 381 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
CDH13-202ENST00000428848 LRSAM1Q6UWE0 723 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 ANKLE2Q86XL3 938 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 TMX3Q96JJ7 454 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 TMEM63CQ9P1W3 806 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 LRRC37A3O60309 1634 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 KDRP35968 1356 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 APBB1O00213 710 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 DYNC1I1O14576 645 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 ESYT1Q9BSJ8 1104 aa10.75□□□□□ -0.69
CDH13-202ENST00000428848 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
CDH13-202ENST00000428848 NCLP19338 710 aaKnown RBP10.74□□□□□ -0.69
CDH13-202ENST00000428848 ANAPC15P60006 121 aa10.74□□□□□ -0.69
CDH13-202ENST00000428848 INTS4Q96HW7 963 aaKnown RBP10.74□□□□□ -0.69
CDH13-202ENST00000428848 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
CDH13-202ENST00000428848 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
CDH13-202ENST00000428848 SBNO1A3KN83 1393 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 FLT4P35916 1363 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 MAP3K19Q56UN5 1328 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 TCHHQ07283 1943 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 F6X3S4 739 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 MBD3O95983 291 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 GNAI2P04899 355 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 NEK4P51957 841 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 STAP2Q9UGK3 403 aa10.73□□□□□ -0.69
CDH13-202ENST00000428848 USP54Q70EL1 1684 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 EPB41L2O43491 1005 aaKnown RBP10.72□□□□□ -0.69
CDH13-202ENST00000428848 ATP8B2P98198 1209 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 MTHFSDQ2M296 383 aaKnown RBP10.72□□□□□ -0.69
CDH13-202ENST00000428848 CHAMP1Q96JM3 812 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 PALD1Q9ULE6 856 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 CHMLP26374 656 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 MIS18AQ9NYP9 233 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
CDH13-202ENST00000428848 NUTM2FA1L443 756 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 FOXO3O43524 673 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 MX1P20591 662 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 MCM5P33992 734 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms