RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
IMP4-204ENST00000428740 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
IMP4-204ENST00000428740 SSFA2P28290 1259 aa20.12■□□□□ 0.81
IMP4-204ENST00000428740 PPP2R1AP30153 589 aa20.12■□□□□ 0.81
IMP4-204ENST00000428740 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
IMP4-204ENST00000428740 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
IMP4-204ENST00000428740 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
IMP4-204ENST00000428740 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
IMP4-204ENST00000428740 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
IMP4-204ENST00000428740 ITPK1Q13572 414 aa20.1■□□□□ 0.81
IMP4-204ENST00000428740 GAS2L2Q8NHY3 880 aa20.1■□□□□ 0.81
IMP4-204ENST00000428740 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
IMP4-204ENST00000428740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
IMP4-204ENST00000428740 RNMTO43148 476 aaKnown RBP20.09■□□□□ 0.81
IMP4-204ENST00000428740 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
IMP4-204ENST00000428740 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
IMP4-204ENST00000428740 C5P01031 1676 aa20.07■□□□□ 0.8
IMP4-204ENST00000428740 GNPATO15228 680 aa20.07■□□□□ 0.8
IMP4-204ENST00000428740 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
IMP4-204ENST00000428740 COL3A1P02461 1466 aaPredicted RBP20.06■□□□□ 0.8
IMP4-204ENST00000428740 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
IMP4-204ENST00000428740 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
IMP4-204ENST00000428740 FCHSD2O94868 740 aa20.06■□□□□ 0.8
IMP4-204ENST00000428740 PHF14O94880 888 aa20.06■□□□□ 0.8
IMP4-204ENST00000428740 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
IMP4-204ENST00000428740 ADRA2BP18089 450 aa20.06■□□□□ 0.8
IMP4-204ENST00000428740 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
IMP4-204ENST00000428740 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
IMP4-204ENST00000428740 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
IMP4-204ENST00000428740 CNTNAP4Q9C0A0 1308 aa20.04■□□□□ 0.8
IMP4-204ENST00000428740 RPS6KA4O75676 772 aa20.04■□□□□ 0.8
IMP4-204ENST00000428740 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
IMP4-204ENST00000428740 TAF1LQ8IZX4 1826 aa20.03■□□□□ 0.8
IMP4-204ENST00000428740 NEFMP07197 916 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 TEFQ10587 303 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 RSPH6AQ9H0K4 717 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 CD2APQ9Y5K6 639 aa20.02■□□□□ 0.8
IMP4-204ENST00000428740 ZNF831Q5JPB2 1677 aa20.01■□□□□ 0.79
IMP4-204ENST00000428740 RALBP1Q15311 655 aa20.01■□□□□ 0.79
IMP4-204ENST00000428740 NLGN1Q8N2Q7 840 aa20.01■□□□□ 0.79
IMP4-204ENST00000428740 RFC4P35249 363 aa20■□□□□ 0.79
IMP4-204ENST00000428740 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
IMP4-204ENST00000428740 AMIGO3Q86WK7 504 aa20■□□□□ 0.79
IMP4-204ENST00000428740 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
IMP4-204ENST00000428740 PNNQ9H307 717 aaKnown RBP20■□□□□ 0.79
IMP4-204ENST00000428740 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
IMP4-204ENST00000428740 TTC5Q8N0Z6 440 aa19.99■□□□□ 0.79
IMP4-204ENST00000428740 IL17REQ8NFR9 667 aa19.99■□□□□ 0.79
IMP4-204ENST00000428740 ARHGEF1Q92888 912 aaKnown RBP19.99■□□□□ 0.79
IMP4-204ENST00000428740 PHACTR3Q96KR7 559 aa19.99■□□□□ 0.79
IMP4-204ENST00000428740 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
IMP4-204ENST00000428740 CRKLP46109 303 aaKnown RBP19.98■□□□□ 0.79
IMP4-204ENST00000428740 GPR162Q16538 588 aa19.98■□□□□ 0.79
IMP4-204ENST00000428740 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
IMP4-204ENST00000428740 SCN11AQ9UI33 1791 aa19.98■□□□□ 0.79
IMP4-204ENST00000428740 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
IMP4-204ENST00000428740 YY1P25490 414 aa19.97■□□□□ 0.79
IMP4-204ENST00000428740 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
IMP4-204ENST00000428740 SLC39A6Q13433 755 aa19.97■□□□□ 0.79
IMP4-204ENST00000428740 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
IMP4-204ENST00000428740 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
IMP4-204ENST00000428740 MRC1P22897 1456 aa19.96■□□□□ 0.79
IMP4-204ENST00000428740 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
IMP4-204ENST00000428740 CCDC87Q9NVE4 849 aa19.95■□□□□ 0.78
IMP4-204ENST00000428740 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
IMP4-204ENST00000428740 STARD3NLO95772 234 aa19.94■□□□□ 0.78
IMP4-204ENST00000428740 INTS5Q6P9B9 1019 aaKnown RBP19.94■□□□□ 0.78
IMP4-204ENST00000428740 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
IMP4-204ENST00000428740 GRIN3BO60391 1043 aa19.93■□□□□ 0.78
IMP4-204ENST00000428740 CYP19A1P11511 503 aaPredicted RBP19.93■□□□□ 0.78
IMP4-204ENST00000428740 CEMIPQ8WUJ3 1361 aa19.93■□□□□ 0.78
IMP4-204ENST00000428740 MMP10P09238 476 aa19.92■□□□□ 0.78
IMP4-204ENST00000428740 NLGN2Q8NFZ4 835 aa19.92■□□□□ 0.78
IMP4-204ENST00000428740 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
IMP4-204ENST00000428740 BTBD11A6QL63 1104 aa19.91■□□□□ 0.78
IMP4-204ENST00000428740 GYS1P13807 737 aa19.91■□□□□ 0.78
IMP4-204ENST00000428740 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
IMP4-204ENST00000428740 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
IMP4-204ENST00000428740 ZPR1O75312 459 aa19.9■□□□□ 0.78
IMP4-204ENST00000428740 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
IMP4-204ENST00000428740 ZNF496Q96IT1 587 aaPredicted RBP19.89■□□□□ 0.77
IMP4-204ENST00000428740 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
IMP4-204ENST00000428740 COL5A3P25940 1745 aaPredicted RBP19.88■□□□□ 0.77
IMP4-204ENST00000428740 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
IMP4-204ENST00000428740 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
IMP4-204ENST00000428740 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
IMP4-204ENST00000428740 A0A087WZG4 1122 aa19.87■□□□□ 0.77
IMP4-204ENST00000428740 TGFB2P61812 414 aa19.87■□□□□ 0.77
IMP4-204ENST00000428740 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
IMP4-204ENST00000428740 MAPK8IP3Q9UPT6 1336 aa19.86■□□□□ 0.77
IMP4-204ENST00000428740 TAF7Q15545 349 aaPredicted RBP19.86■□□□□ 0.77
IMP4-204ENST00000428740 MCM10Q7L590 875 aa19.86■□□□□ 0.77
IMP4-204ENST00000428740 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
IMP4-204ENST00000428740 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
IMP4-204ENST00000428740 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
IMP4-204ENST00000428740 NARFQ9UHQ1 456 aa19.86■□□□□ 0.77
IMP4-204ENST00000428740 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
IMP4-204ENST00000428740 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms