RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
XRCC6-206ENST00000428575 ATF3P18847 181 aa13.79□□□□□ -0.2
XRCC6-206ENST00000428575 UTP14CQ5TAP6 766 aaKnown RBP13.79□□□□□ -0.2
XRCC6-206ENST00000428575 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
XRCC6-206ENST00000428575 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
XRCC6-206ENST00000428575 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
XRCC6-206ENST00000428575 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
XRCC6-206ENST00000428575 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
XRCC6-206ENST00000428575 CLEC17AQ6ZS10 378 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
XRCC6-206ENST00000428575 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
XRCC6-206ENST00000428575 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
XRCC6-206ENST00000428575 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 ABCC4O15439 1325 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 SLIT3O75094 1523 aa13.78□□□□□ -0.2
XRCC6-206ENST00000428575 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.2
XRCC6-206ENST00000428575 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.2
XRCC6-206ENST00000428575 GCP02774 474 aa13.77□□□□□ -0.21
XRCC6-206ENST00000428575 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
XRCC6-206ENST00000428575 GAS2L3Q86XJ1 694 aa13.77□□□□□ -0.21
XRCC6-206ENST00000428575 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
XRCC6-206ENST00000428575 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
XRCC6-206ENST00000428575 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
XRCC6-206ENST00000428575 HSPA2P54652 639 aa13.76□□□□□ -0.21
XRCC6-206ENST00000428575 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
XRCC6-206ENST00000428575 DCCP43146 1447 aa13.76□□□□□ -0.21
XRCC6-206ENST00000428575 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
XRCC6-206ENST00000428575 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
XRCC6-206ENST00000428575 MST1RQ04912 1400 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
XRCC6-206ENST00000428575 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
XRCC6-206ENST00000428575 ZBTB7BO15156 539 aaPredicted RBP13.75□□□□□ -0.21
XRCC6-206ENST00000428575 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
XRCC6-206ENST00000428575 MSH6P52701 1360 aa13.74□□□□□ -0.21
XRCC6-206ENST00000428575 ZNF445P59923 1031 aa13.74□□□□□ -0.21
XRCC6-206ENST00000428575 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 UQCRHP07919 91 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
XRCC6-206ENST00000428575 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 PTPRCP08575 1304 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
XRCC6-206ENST00000428575 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
XRCC6-206ENST00000428575 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
XRCC6-206ENST00000428575 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
XRCC6-206ENST00000428575 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.21
XRCC6-206ENST00000428575 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
XRCC6-206ENST00000428575 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
XRCC6-206ENST00000428575 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
XRCC6-206ENST00000428575 C1orf115Q9H7X2 142 aa13.7□□□□□ -0.22
XRCC6-206ENST00000428575 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
XRCC6-206ENST00000428575 RGS12O14924 1447 aa13.69□□□□□ -0.22
XRCC6-206ENST00000428575 DMTNQ08495 405 aa13.69□□□□□ -0.22
XRCC6-206ENST00000428575 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
XRCC6-206ENST00000428575 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
XRCC6-206ENST00000428575 PLEKHO1Q53GL0 409 aaPredicted RBP13.69□□□□□ -0.22
XRCC6-206ENST00000428575 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
XRCC6-206ENST00000428575 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
XRCC6-206ENST00000428575 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
XRCC6-206ENST00000428575 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
XRCC6-206ENST00000428575 NCAPD2Q15021 1401 aa13.68□□□□□ -0.22
XRCC6-206ENST00000428575 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
XRCC6-206ENST00000428575 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
XRCC6-206ENST00000428575 CEMIPQ8WUJ3 1361 aa13.68□□□□□ -0.22
XRCC6-206ENST00000428575 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
XRCC6-206ENST00000428575 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
XRCC6-206ENST00000428575 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
XRCC6-206ENST00000428575 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 DDX49Q9Y6V7 483 aaKnown RBP13.67□□□□□ -0.22
XRCC6-206ENST00000428575 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 NUCB1Q02818 461 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 GCC1Q96CN9 775 aa13.67□□□□□ -0.22
XRCC6-206ENST00000428575 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
XRCC6-206ENST00000428575 NUCB2P80303 420 aa13.66□□□□□ -0.22
XRCC6-206ENST00000428575 G2E3Q7L622 706 aa13.66□□□□□ -0.22
XRCC6-206ENST00000428575 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
XRCC6-206ENST00000428575 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
XRCC6-206ENST00000428575 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 FGD1P98174 961 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 SIRT2Q8IXJ6 389 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 STRCQ7RTU9 1775 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
XRCC6-206ENST00000428575 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
XRCC6-206ENST00000428575 KIF20AO95235 890 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms