RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 SOX11P35716 441 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 EIF4G2P78344 907 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 ZNF746Q6NUN9 644 aaPredicted RBP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 PLA2G2EQ9NZK7 142 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 MAFBQ9Y5Q3 323 aaPredicted RBP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 COMMD10Q9Y6G5 202 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 SCAMP3O14828 347 aaKnown RBP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 ITGBL1O95965 494 aaPredicted RBP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 CCDC24Q8N4L8 307 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 PNMA1Q8ND90 353 aa4.67□□□□□ -1.66
CCDC30-203ENST00000428554 GNL3LQ9NVN8 582 aaKnown RBP4.67□□□□□ -1.66
CCDC30-203ENST00000428554 SH3BP5O60239 455 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 LZTS3O60299 673 aaPredicted RBP4.66□□□□□ -1.66
CCDC30-203ENST00000428554 MRPL58Q14197 206 aaKnown RBP4.66□□□□□ -1.66
CCDC30-203ENST00000428554 TANGO6Q9C0B7 1094 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 SSFA2P28290 1259 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 SOGA3Q5TF21 947 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 PCGF5Q86SE9 256 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 FAM174AQ8TBP5 190 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 IRF2BPLQ9H1B7 796 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 PIF1Q9H611 641 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 UNC93B1Q9H1C4 597 aa4.66□□□□□ -1.66
CCDC30-203ENST00000428554 S1PR4O95977 384 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 VIL1P09327 827 aaKnown RBP4.65□□□□□ -1.66
CCDC30-203ENST00000428554 PAX3P23760 479 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 LDLRAD1Q5T700 205 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 SLC6A16Q9GZN6 736 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 TMX1Q9H3N1 280 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 IL21Q9HBE4 155 aa4.65□□□□□ -1.66
CCDC30-203ENST00000428554 ATP9BO43861 1147 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 GYS2P54840 703 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 RHBDL3P58872 404 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 KCNC4Q03721 635 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 WDR78Q5VTH9 848 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 PDXDC2PQ6P474 469 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 RPUSD2Q8IZ73 545 aaKnown RBP4.65□□□□□ -1.67
CCDC30-203ENST00000428554 RELTQ969Z4 430 aa4.65□□□□□ -1.67
CCDC30-203ENST00000428554 CCDC85AQ96PX6 553 aaPredicted RBP4.65□□□□□ -1.67
CCDC30-203ENST00000428554 AMOTL1Q8IY63 956 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 OS9Q13438 667 aaPredicted RBP4.64□□□□□ -1.67
CCDC30-203ENST00000428554 C11orf96Q7Z7L8 435 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 METTL16Q86W50 562 aaKnown RBP4.64□□□□□ -1.67
CCDC30-203ENST00000428554 FAM9BQ8IZU0 186 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 DEPDC4Q8N2C3 294 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 ADAM32Q8TC27 787 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 TYW1Q9NV66 732 aaKnown RBP4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PRKAG2Q9UGJ0 569 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 SWAP70Q9UH65 585 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PNMA2Q9UL42 364 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PCDHB9Q9Y5E1 797 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 COL4A3BPQ9Y5P4 624 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 ATP2B1P20020 1258 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PTK2Q05397 1052 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 TSGA10IPQ3SY00 556 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 RNF187Q5TA31 235 aaPredicted RBP4.64□□□□□ -1.67
CCDC30-203ENST00000428554 SH3BP5LQ7L8J4 393 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 CCDC146Q8IYE0 955 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PCDH12Q9NPG4 1184 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 CEP126Q9P2H0 1117 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 HECW2Q9P2P5 1572 aa4.64□□□□□ -1.67
CCDC30-203ENST00000428554 PPEF1O14829 653 aaPredicted RBP4.63□□□□□ -1.67
CCDC30-203ENST00000428554 SKIP12755 728 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 BDNFP23560 247 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 CALRP27797 417 aaKnown RBP4.63□□□□□ -1.67
CCDC30-203ENST00000428554 TBX4P57082 545 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 LINC01559Q495D7 138 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 KANK4Q5T7N3 995 aaPredicted RBP4.63□□□□□ -1.67
CCDC30-203ENST00000428554 RINLQ6ZS11 566 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 BAP1Q92560 729 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 CARD14Q9BXL6 1004 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 TGIF2Q9GZN2 237 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 FCF1Q9Y324 198 aaKnown RBP4.63□□□□□ -1.67
CCDC30-203ENST00000428554 ENPP3O14638 875 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 C4orf48Q5BLP8 95 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 NBPF14Q5TI25 921 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 ARMC2Q8NEN0 867 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 DHX38Q92620 1227 aaKnown RBP4.63□□□□□ -1.67
CCDC30-203ENST00000428554 FOXJ1Q92949 421 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 ARHGAP9Q9BRR9 750 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 ZMIZ1Q9ULJ6 1067 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 GPSM3Q9Y4H4 160 aa4.63□□□□□ -1.67
CCDC30-203ENST00000428554 USP17L3A6NCW0 530 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 USP17L4A6NCW7 530 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 TSNAXIP1Q2TAA8 658 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 USP17L2Q6R6M4 530 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 USP17L1Q7RTZ2 530 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 PHTF2Q8N3S3 785 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 BACH2Q9BYV9 841 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 KCNG1Q9UIX4 513 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 MAGEB6P1A0A0J9YX57 407 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 USP17L5A8MUK1 530 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 CCER2I3L3R5 266 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 TMEM164Q5U3C3 297 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 GPKOWQ92917 476 aaPredicted RBP eCLIP4.62□□□□□ -1.67
CCDC30-203ENST00000428554 CLSPNQ9HAW4 1339 aa4.62□□□□□ -1.67
CCDC30-203ENST00000428554 RBM10P98175 930 aaKnown RBP4.61□□□□□ -1.67
CCDC30-203ENST00000428554 SH3RF1Q7Z6J0 888 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 JAZF1Q86VZ6 243 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 SECISBP2LQ93073 1101 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms