RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
C9orf3-206ENST00000428313 SETBP1Q9Y6X0 1596 aa19.2■□□□□ 0.66
C9orf3-206ENST00000428313 TPD52L1Q16890 204 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-206ENST00000428313 ZSCAN25Q6NSZ9 544 aa19.2■□□□□ 0.66
C9orf3-206ENST00000428313 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
C9orf3-206ENST00000428313 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
C9orf3-206ENST00000428313 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
C9orf3-206ENST00000428313 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-206ENST00000428313 ZNF215Q9UL58 517 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-206ENST00000428313 MMP14P50281 582 aa19.19■□□□□ 0.66
C9orf3-206ENST00000428313 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
C9orf3-206ENST00000428313 ATP6V1DQ9Y5K8 247 aa19.19■□□□□ 0.66
C9orf3-206ENST00000428313 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
C9orf3-206ENST00000428313 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
C9orf3-206ENST00000428313 FOXD4L6Q3SYB3 417 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-206ENST00000428313 FOXD4L3Q6VB84 417 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-206ENST00000428313 TXLNBQ8N3L3 684 aa19.18■□□□□ 0.66
C9orf3-206ENST00000428313 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
C9orf3-206ENST00000428313 RASSF4Q9H2L5 321 aa19.18■□□□□ 0.66
C9orf3-206ENST00000428313 SLC12A5Q9H2X9 1139 aa19.18■□□□□ 0.66
C9orf3-206ENST00000428313 SSH2Q76I76 1423 aa19.18■□□□□ 0.66
C9orf3-206ENST00000428313 ZSCAN22P10073 491 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-206ENST00000428313 TNNT3P45378 269 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-206ENST00000428313 VAMP4O75379 141 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 LRMPQ12912 555 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 CERS3Q8IU89 383 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 ANKRD44Q8N8A2 993 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 SECISBP2LQ93073 1101 aaKnown RBP19.17■□□□□ 0.66
C9orf3-206ENST00000428313 KIF1BO60333 1816 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 OTUD7AQ8TE49 926 aaPredicted RBP19.17■□□□□ 0.66
C9orf3-206ENST00000428313 ST7Q9NRC1 585 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 ZNF446Q9NWS9 450 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 CHD1O14646 1710 aa19.17■□□□□ 0.66
C9orf3-206ENST00000428313 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
C9orf3-206ENST00000428313 TEX35Q5T0J7 233 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 PLA2G4DQ86XP0 818 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 AEBP1Q8IUX7 1158 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 ATP10DQ9P241 1426 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
C9orf3-206ENST00000428313 H2AFXP16104 143 aaPredicted RBP19.16■□□□□ 0.66
C9orf3-206ENST00000428313 NOP2P46087 812 aaKnown RBP19.16■□□□□ 0.66
C9orf3-206ENST00000428313 ELF2Q15723 593 aa19.16■□□□□ 0.66
C9orf3-206ENST00000428313 NYAP1Q6ZVC0 841 aa19.15■□□□□ 0.66
C9orf3-206ENST00000428313 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-206ENST00000428313 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
C9orf3-206ENST00000428313 TUBGCP6Q96RT7 1819 aa19.15■□□□□ 0.66
C9orf3-206ENST00000428313 NEMFO60524 1076 aa19.14■□□□□ 0.66
C9orf3-206ENST00000428313 SLU7O95391 586 aaKnown RBP19.14■□□□□ 0.66
C9orf3-206ENST00000428313 ZNF75DP51815 510 aa19.14■□□□□ 0.66
C9orf3-206ENST00000428313 RSPH14Q9UHP6 348 aa19.14■□□□□ 0.66
C9orf3-206ENST00000428313 ERBB3P21860 1342 aa19.14■□□□□ 0.65
C9orf3-206ENST00000428313 CDC25BP30305 580 aa19.14■□□□□ 0.65
C9orf3-206ENST00000428313 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
C9orf3-206ENST00000428313 PTPRCP08575 1304 aa19.13■□□□□ 0.65
C9orf3-206ENST00000428313 DRC7Q8IY82 874 aa19.13■□□□□ 0.65
C9orf3-206ENST00000428313 ESYT1Q9BSJ8 1104 aa19.13■□□□□ 0.65
C9orf3-206ENST00000428313 FHOD1Q9Y613 1164 aa19.13■□□□□ 0.65
C9orf3-206ENST00000428313 RAD50Q92878 1312 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 KIF2AO00139 706 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-206ENST00000428313 EPB41L2O43491 1005 aaKnown RBP19.12■□□□□ 0.65
C9orf3-206ENST00000428313 F13A1P00488 732 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 PTPN14Q15678 1187 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-206ENST00000428313 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
C9orf3-206ENST00000428313 ARHGEF40Q8TER5 1519 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 TPM4P67936 248 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 ZNF592Q92610 1267 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 PALD1Q9ULE6 856 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 MRVI1Q9Y6F6 885 aa19.12■□□□□ 0.65
C9orf3-206ENST00000428313 STX6O43752 255 aa19.11■□□□□ 0.65
C9orf3-206ENST00000428313 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
C9orf3-206ENST00000428313 NRBP1Q9UHY1 535 aa19.11■□□□□ 0.65
C9orf3-206ENST00000428313 FIBPO43427 364 aa19.11■□□□□ 0.65
C9orf3-206ENST00000428313 DHX16O60231 1041 aaKnown RBP19.11■□□□□ 0.65
C9orf3-206ENST00000428313 MAP3K11Q16584 847 aa19.11■□□□□ 0.65
C9orf3-206ENST00000428313 TDRD7Q8NHU6 1098 aaKnown RBP19.11■□□□□ 0.65
C9orf3-206ENST00000428313 CACTINQ8WUQ7 758 aaKnown RBP19.11■□□□□ 0.65
C9orf3-206ENST00000428313 ANKRD26Q9UPS8 1709 aa19.1■□□□□ 0.65
C9orf3-206ENST00000428313 TYRO3Q06418 890 aa19.1■□□□□ 0.65
C9orf3-206ENST00000428313 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
C9orf3-206ENST00000428313 TRIM5Q9C035 493 aa19.09■□□□□ 0.65
C9orf3-206ENST00000428313 ATP7AQ04656 1500 aa19.09■□□□□ 0.65
C9orf3-206ENST00000428313 ADGRF5Q8IZF2 1346 aa19.09■□□□□ 0.65
C9orf3-206ENST00000428313 CASQ1P31415 396 aa19.09■□□□□ 0.65
C9orf3-206ENST00000428313 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.09■□□□□ 0.65
C9orf3-206ENST00000428313 V9GYY5 206 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-206ENST00000428313 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
C9orf3-206ENST00000428313 ABCA9Q8IUA7 1624 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 PNMA6AP0CW24 399 aaPredicted RBP19.08■□□□□ 0.65
C9orf3-206ENST00000428313 PLA2G4AP47712 749 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 CEP85Q6P2H3 762 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 LUZP1Q86V48 1076 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 BRMS1Q9HCU9 246 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 CWC15Q9P013 229 aaKnown RBP19.08■□□□□ 0.65
C9orf3-206ENST00000428313 FANCAO15360 1455 aa19.08■□□□□ 0.65
C9orf3-206ENST00000428313 ELP1O95163 1332 aa19.08■□□□□ 0.64
C9orf3-206ENST00000428313 LMTK2Q8IWU2 1503 aa19.08■□□□□ 0.64
C9orf3-206ENST00000428313 NFATC2IPQ8NCF5 419 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms